Literature DB >> 24363286

No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst).

Niclas Gyllenstrand1, Anna Karlgren, David Clapham, Karl Holm, Anthony Hall, Peter D Gould, Thomas Källman, Ulf Lagercrantz.   

Abstract

The identification and cloning of full-length homologs of circadian clock genes from Picea abies represent a first step to study the function and evolution of the circadian clock in gymnosperms. Phylogenetic analyses suggest that the sequences of key circadian clock genes are conserved between angiosperms and gymnosperms. though fewer homologous copies were found for most gene families in P. abies. We detected diurnal cycling of circadian clock genes in P. abies using quantitative real-time PCR; however, cycling appeared to be rapidly dampened under free-running conditions. Given the unexpected absence of transcriptional cycling during constant conditions, we employed a complementary method to assay circadian rhythmic outputs and measured delayed fluorescence in seedlings of Norway spruce. Neither of the two approaches to study circadian rhythms in Norway spruce could detect robust ∼24 h cycling behavior under constant conditions. These data suggest gene conservation but fundamental differences in clock function between gymnosperms and other plant taxa.

Entities:  

Keywords:  Circadian clock; Delayed fluorescence; Diurnal cycling; Gene expression; Phylogeny; Picea abies

Mesh:

Year:  2013        PMID: 24363286     DOI: 10.1093/pcp/pct199

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  11 in total

Review 1.  Dancing in the dark: darkness as a signal in plants.

Authors:  Adam Seluzicki; Yogev Burko; Joanne Chory
Journal:  Plant Cell Environ       Date:  2017-02-23       Impact factor: 7.228

2.  Clock genes and diurnal transcriptome dynamics in summer and winter in the gymnosperm Japanese cedar (Cryptomeria japonica (L.f.) D.Don).

Authors:  Mine Nose; Atsushi Watanabe
Journal:  BMC Plant Biol       Date:  2014-11-18       Impact factor: 4.215

3.  A comparison of high-throughput techniques for assaying circadian rhythms in plants.

Authors:  Andrew J Tindall; Jade Waller; Mark Greenwood; Peter D Gould; James Hartwell; Anthony Hall
Journal:  Plant Methods       Date:  2015-05-03       Impact factor: 4.993

4.  Early evolution of the land plant circadian clock.

Authors:  Anna-Malin Linde; D Magnus Eklund; Akane Kubota; Eric R A Pederson; Karl Holm; Niclas Gyllenstrand; Ryuichi Nishihama; Nils Cronberg; Tomoaki Muranaka; Tokitaka Oyama; Takayuki Kohchi; Ulf Lagercrantz
Journal:  New Phytol       Date:  2017-02-28       Impact factor: 10.151

5.  Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.

Authors:  Richard Cronn; Peter C Dolan; Sanjuro Jogdeo; Jill L Wegrzyn; David B Neale; J Bradley St Clair; Dee R Denver
Journal:  BMC Genomics       Date:  2017-07-24       Impact factor: 3.969

6.  A comparative study on the circadian rhythm of the electrical signals of Broussonetia papyrifera and Morus alba.

Authors:  Jinjin Xie; Yanyou Wu; Deke Xing; Zhongying Li; Tian Chen; Rongrong Duan; Xiaoxing Zhu
Journal:  Plant Signal Behav       Date:  2021-07-06

7.  Transcriptome-wide analysis supports environmental adaptations of two Pinus pinaster populations from contrasting habitats.

Authors:  Rafael A Cañas; Isabel Feito; José Francisco Fuente-Maqueda; Concepción Ávila; Juan Majada; Francisco M Cánovas
Journal:  BMC Genomics       Date:  2015-11-06       Impact factor: 3.969

8.  Patterns of nucleotide diversity at photoperiod related genes in Norway spruce [Picea abies (L.) Karst].

Authors:  Thomas Källman; Stéphane De Mita; Hanna Larsson; Niclas Gyllenstrand; Myriam Heuertz; Laura Parducci; Yoshihisa Suyama; Ulf Lagercrantz; Martin Lascoux
Journal:  PLoS One       Date:  2014-05-08       Impact factor: 3.240

9.  Effects of day length- and temperature-regulated genes on annual transcriptome dynamics in Japanese cedar (Cryptomeria japonica D. Don), a gymnosperm indeterminate species.

Authors:  Mine Nose; Manabu Kurita; Miho Tamura; Michinari Matsushita; Yuichiro Hiraoka; Taiichi Iki; So Hanaoka; Kentaro Mishima; Miyoko Tsubomura; Atsushi Watanabe
Journal:  PLoS One       Date:  2020-03-09       Impact factor: 3.240

10.  A multiscale approach to detect selection in nonmodel tree species: Widespread adaptation despite population decline in Taxus baccata L.

Authors:  Maria Mayol; Miquel Riba; Stephen Cavers; Delphine Grivet; Lucie Vincenot; Federica Cattonaro; Giovanni G Vendramin; Santiago C González-Martínez
Journal:  Evol Appl       Date:  2019-07-19       Impact factor: 5.183

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