Literature DB >> 24326628

Epigenetic research in cancer epidemiology: trends, opportunities, and challenges.

Mukesh Verma1, Scott Rogers, Rao L Divi, Sheri D Schully, Stefanie Nelson, L Joseph Su, Sharon A Ross, Susan Pilch, Deborah M Winn, Muin J Khoury.   

Abstract

Epigenetics is emerging as an important field in cancer epidemiology that promises to provide insights into gene regulation and facilitate cancer control throughout the cancer care continuum. Increasingly, investigators are incorporating epigenetic analysis into the studies of etiology and outcomes. To understand current progress and trends in the inclusion of epigenetics in cancer epidemiology, we evaluated the published literature and the National Cancer Institute (NCI)-supported research grant awards in this field to identify trends in epigenetics research. We present a summary of the epidemiologic studies in NCI's grant portfolio (from January 2005 through December 2012) and in the scientific literature published during the same period, irrespective of support from the NCI. Blood cells and tumor tissue were the most commonly used biospecimens in these studies, although buccal cells, cervical cells, sputum, and stool samples were also used. DNA methylation profiling was the focus of the majority of studies, but several studies also measured microRNA profiles. We illustrate here the current status of epidemiologic studies that are evaluating epigenetic changes in large populations. The incorporation of epigenomic assessments in cancer epidemiology studies has and is likely to continue to provide important insights into the field of cancer research.

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Year:  2013        PMID: 24326628      PMCID: PMC3925982          DOI: 10.1158/1055-9965.EPI-13-0573

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  89 in total

1.  Accurate classification of metastatic brain tumors using a novel microRNA-based test.

Authors:  Wolf C Mueller; Yael Spector; Tina Bocker Edmonston; Brianna St Cyr; Diana Jaeger; Ulrike Lass; Ranit Aharonov; Shai Rosenwald; Ayelet Chajut
Journal:  Oncologist       Date:  2011-01-27

2.  Out of Africa and into epigenetics: discovering reprogramming drugs.

Authors:  Peter Jones
Journal:  Nat Cell Biol       Date:  2011-01       Impact factor: 28.824

3.  Constitutional methylation of the BRCA1 promoter is specifically associated with BRCA1 mutation-associated pathology in early-onset breast cancer.

Authors:  Ee Ming Wong; Melissa C Southey; Stephen B Fox; Melissa A Brown; James G Dowty; Mark A Jenkins; Graham G Giles; John L Hopper; Alexander Dobrovic
Journal:  Cancer Prev Res (Phila)       Date:  2010-10-26

4.  Promoter methylation of candidate genes associated with familial testicular cancer.

Authors:  Lisa Mirabello; Christian P Kratz; Sharon A Savage; Mark H Greene
Journal:  Int J Mol Epidemiol Genet       Date:  2012-08-31

Review 5.  Epigenetics in cancer: implications for early detection and prevention.

Authors:  Mukesh Verma; Sudhir Srivastava
Journal:  Lancet Oncol       Date:  2002-12       Impact factor: 41.316

6.  Quantitative analyses of DAPK1 methylation in AML and MDS.

Authors:  Rainer Claus; Björn Hackanson; Anna R Poetsch; Manuela Zucknick; Miriam Sonnet; Nadja Blagitko-Dorfs; Jan Hiller; Stefan Wilop; Tim H Brümmendorf; Oliver Galm; Uwe Platzbecker; John C Byrd; Konstanze Döhner; Hartmut Döhner; Michael Lübbert; Christoph Plass
Journal:  Int J Cancer       Date:  2011-11-28       Impact factor: 7.396

7.  MicroRNA expression in head and neck cancer associates with alcohol consumption and survival.

Authors:  Michele Avissar; Michael D McClean; Karl T Kelsey; Carmen J Marsit
Journal:  Carcinogenesis       Date:  2009-12       Impact factor: 4.944

8.  DNA methylation markers and early recurrence in stage I lung cancer.

Authors:  Malcolm V Brock; Craig M Hooker; Emi Ota-Machida; Yu Han; Mingzhou Guo; Stephen Ames; Sabine Glöckner; Steven Piantadosi; Edward Gabrielson; Genevieve Pridham; Kristen Pelosky; Steven A Belinsky; Stephen C Yang; Stephen B Baylin; James G Herman
Journal:  N Engl J Med       Date:  2008-03-13       Impact factor: 91.245

9.  Global levels of histone modifications predict prognosis in different cancers.

Authors:  David B Seligson; Steve Horvath; Matthew A McBrian; Vei Mah; Hong Yu; Sheila Tze; Qun Wang; David Chia; Lee Goodglick; Siavash K Kurdistani
Journal:  Am J Pathol       Date:  2009-04-06       Impact factor: 4.307

10.  Mining the epigenome for methylated genes in lung cancer.

Authors:  Mathewos Tessema; Steven A Belinsky
Journal:  Proc Am Thorac Soc       Date:  2008-12-01
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  17 in total

Review 1.  Influence of environmental exposure on human epigenetic regulation.

Authors:  Carmen J Marsit
Journal:  J Exp Biol       Date:  2015-01-01       Impact factor: 3.312

Review 2.  Epigenetically regulated imprinted gene expression associated with IVF and infertility: possible influence of prenatal stress and depression.

Authors:  Julia F Litzky; Carmen J Marsit
Journal:  J Assist Reprod Genet       Date:  2019-05-24       Impact factor: 3.412

Review 3.  Epigenetic Biomarkers in Colorectal Cancer.

Authors:  Mukesh Verma; Vineet Kumar
Journal:  Mol Diagn Ther       Date:  2017-04       Impact factor: 4.074

Review 4.  Biomarkers of genome instability and cancer epigenetics.

Authors:  Adriana H O Reis; Fernando R Vargas; Bernardo Lemos
Journal:  Tumour Biol       Date:  2016-07-28

Review 5.  Mechanistic and Technical Challenges in Studying the Human Microbiome and Cancer Epidemiology.

Authors:  Mukesh Verma
Journal:  Technol Cancer Res Treat       Date:  2016-06-22

6.  Tissue-Specific Trans Regulation of the Mouse Epigenome.

Authors:  Christopher L Baker; Michael Walker; Seda Arat; Guruprasad Ananda; Pavlina Petkova; Natalie R Powers; Hui Tian; Catrina Spruce; Bo Ji; Dylan Rausch; Kwangbom Choi; Petko M Petkov; Gregory W Carter; Kenneth Paigen
Journal:  Genetics       Date:  2018-12-28       Impact factor: 4.562

7.  KMT2C is a potential biomarker of prognosis and chemotherapy sensitivity in breast cancer.

Authors:  Xinhua Liu; Rongfang Qiu; Min Xu; Miaomiao Meng; Siyu Zhao; Jiansong Ji; Yang Yang
Journal:  Breast Cancer Res Treat       Date:  2021-07-08       Impact factor: 4.872

8.  Genome-wide association studies and epigenome-wide association studies go together in cancer control.

Authors:  Mukesh Verma
Journal:  Future Oncol       Date:  2016-04-15       Impact factor: 3.404

9.  Patterns of Reliability: Assessing the Reproducibility and Integrity of DNA Methylation Measurement.

Authors:  Karen Sugden; Eilis J Hannon; Louise Arseneault; Daniel W Belsky; David L Corcoran; Helen L Fisher; Renate M Houts; Radhika Kandaswamy; Terrie E Moffitt; Richie Poulton; Joseph A Prinz; Line J H Rasmussen; Benjamin S Williams; Chloe C Y Wong; Jonathan Mill; Avshalom Caspi
Journal:  Patterns (N Y)       Date:  2020-04-23

10.  DNA methylation study of fetus genome through a genome-wide analysis.

Authors:  Hong-Dan Wang; Qiao-Fang Hou; Qian-Nan Guo; Tao Li; Dong Wu; Xian-Ping Zhang; Yan Chu; Miao He; Hai Xiao; Liang-Jie Guo; Ke Yang; Shi-Xiu Liao; Bo-Feng Zhu
Journal:  BMC Med Genomics       Date:  2014-04-15       Impact factor: 3.063

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