Literature DB >> 21918973

Quantitative analyses of DAPK1 methylation in AML and MDS.

Rainer Claus1, Björn Hackanson, Anna R Poetsch, Manuela Zucknick, Miriam Sonnet, Nadja Blagitko-Dorfs, Jan Hiller, Stefan Wilop, Tim H Brümmendorf, Oliver Galm, Uwe Platzbecker, John C Byrd, Konstanze Döhner, Hartmut Döhner, Michael Lübbert, Christoph Plass.   

Abstract

Aberrant DNA methylation and concomitant transcriptional silencing of death-associated protein kinase 1 (DAPK1) have been demonstrated to be key pathogenic events in chronic lymphocytic leukemia (CLL). In acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS), however, the presence of elevated DNA methylation levels has been a matter of continued controversy. Several studies demonstrated highly variable frequencies of DAPK1 promoter methylation by the use of methylation-specific PCR (MSP). By quantitative high-resolution assessment, we demonstrate that aberrant DNA methylation is an extremely rare event in this region. We observed elevated levels just in one out of 246 (0.4%) AML patients, all 42 MDS patients were unmethylated. In conclusion, we present a refined DAPK1 methylation analysis in a large representative patient cohort of AML and MDS patients proofing almost complete absence of elevated DNA methylation. Our results highlight the importance of quantitative measurements for translational research questions on primary patient specimens, particularly.
Copyright © 2011 UICC.

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Year:  2011        PMID: 21918973      PMCID: PMC3463871          DOI: 10.1002/ijc.26429

Source DB:  PubMed          Journal:  Int J Cancer        ISSN: 0020-7136            Impact factor:   7.396


  20 in total

1.  Hypermethylation of the DAP-kinase CpG island is a common alteration in B-cell malignancies.

Authors:  R A Katzenellenbogen; S B Baylin; J G Herman
Journal:  Blood       Date:  1999-06-15       Impact factor: 22.113

2.  Extensive intra- and interindividual heterogeneity of p15INK4B methylation in acute myeloid leukemia.

Authors:  A Aggerholm; P Guldberg; M Hokland; P Hokland
Journal:  Cancer Res       Date:  1999-01-15       Impact factor: 12.701

3.  Quantitative high-throughput analysis of DNA methylation patterns by base-specific cleavage and mass spectrometry.

Authors:  Mathias Ehrich; Matthew R Nelson; Patrick Stanssens; Marc Zabeau; Triantafillos Liloglou; George Xinarianos; Charles R Cantor; John K Field; Dirk van den Boom
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-21       Impact factor: 11.205

4.  Restriction landmark genome scanning for aberrant methylation in primary refractory and relapsed acute myeloid leukemia; involvement of the WIT-1 gene.

Authors:  C Plass; F Yu; L Yu; M P Strout; W El-Rifai; E Elonen; S Knuutila; G Marcucci; D C Young; W A Held; C D Bloomfield; M A Caligiuri
Journal:  Oncogene       Date:  1999-05-20       Impact factor: 9.867

5.  Clinical implications of aberrant DNA methylation patterns in acute myelogenous leukemia.

Authors:  Oliver Galm; Stefan Wilop; Christian Lüders; Edgar Jost; Gerald Gehbauer; James G Herman; Rainhardt Osieka
Journal:  Ann Hematol       Date:  2005-12       Impact factor: 3.673

6.  Quantitative DNA methylation predicts survival in adult acute myeloid leukemia.

Authors:  Lars Bullinger; Mathias Ehrich; Konstanze Döhner; Richard F Schlenk; Hartmut Döhner; Matthew R Nelson; Dirk van den Boom
Journal:  Blood       Date:  2009-11-10       Impact factor: 22.113

7.  DNA methylation signatures identify biologically distinct subtypes in acute myeloid leukemia.

Authors:  Maria E Figueroa; Sanne Lugthart; Yushan Li; Claudia Erpelinck-Verschueren; Xutao Deng; Paul J Christos; Elizabeth Schifano; James Booth; Wim van Putten; Lucy Skrabanek; Fabien Campagne; Madhu Mazumdar; John M Greally; Peter J M Valk; Bob Löwenberg; Ruud Delwel; Ari Melnick
Journal:  Cancer Cell       Date:  2010-01-07       Impact factor: 31.743

8.  Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

Authors:  J G Herman; J R Graff; S Myöhänen; B D Nelkin; S B Baylin
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

9.  High sensitivity mapping of methylated cytosines.

Authors:  S J Clark; J Harrison; C L Paul; M Frommer
Journal:  Nucleic Acids Res       Date:  1994-08-11       Impact factor: 16.971

10.  Downregulation of death-associated protein kinase 1 (DAPK1) in chronic lymphocytic leukemia.

Authors:  Aparna Raval; Stephan M Tanner; John C Byrd; Elizabeth B Angerman; James D Perko; Shih-Shih Chen; Björn Hackanson; Michael R Grever; David M Lucas; Jennifer J Matkovic; Thomas S Lin; Thomas J Kipps; Fiona Murray; Dennis Weisenburger; Warren Sanger; Jane Lynch; Patrice Watson; Mary Jansen; Yuko Yoshinaga; Richard Rosenquist; Pieter J de Jong; Penny Coggill; Stephan Beck; Henry Lynch; Albert de la Chapelle; Christoph Plass
Journal:  Cell       Date:  2007-06-01       Impact factor: 41.582

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  14 in total

1.  The polyphenol quercetin induces cell death in leukemia by targeting epigenetic regulators of pro-apoptotic genes.

Authors:  Marisa Claudia Alvarez; Victor Maso; Cristiane Okuda Torello; Karla Priscilla Ferro; Sara Teresinha Olalla Saad
Journal:  Clin Epigenetics       Date:  2018-11-08       Impact factor: 6.551

2.  [Promoter methylation and expression of death-associated protein kinase gene in acute leukemia].

Authors:  Wei-Hua Zhao; Fan-Yi Meng; Yong-Rong Lai; Zhi-Gang Peng; Jie Ma
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2017-03-20

3.  DNMT and HDAC inhibitors induce cryptic transcription start sites encoded in long terminal repeats.

Authors:  David Brocks; Christopher R Schmidt; Michael Daskalakis; Hyo Sik Jang; Nakul M Shah; Daofeng Li; Jing Li; Bo Zhang; Yiran Hou; Sara Laudato; Daniel B Lipka; Johanna Schott; Holger Bierhoff; Yassen Assenov; Monika Helf; Alzbeta Ressnerova; Md Saiful Islam; Anders M Lindroth; Simon Haas; Marieke Essers; Charles D Imbusch; Benedikt Brors; Ina Oehme; Olaf Witt; Michael Lübbert; Jan-Philipp Mallm; Karsten Rippe; Rainer Will; Dieter Weichenhan; Georg Stoecklin; Clarissa Gerhäuser; Christopher C Oakes; Ting Wang; Christoph Plass
Journal:  Nat Genet       Date:  2017-06-12       Impact factor: 38.330

4.  A noncanonical Flt3ITD/NF-κB signaling pathway represses DAPK1 in acute myeloid leukemia.

Authors:  Padmaja Gade; Annique Wilson-Weekes; Rajasubramaniam Shanmugam; Hamid Sayar; Attaya Suvannasankha; Chirayu Goswami; Lang Li; Sushil Gupta; Angelo A Cardoso; Tareq Al Baghdadi; Katie J Sargent; Larry D Cripe; Dhananjaya V Kalvakolanu; H Scott Boswell
Journal:  Clin Cancer Res       Date:  2011-11-17       Impact factor: 12.531

Review 5.  Epigenetic research in cancer epidemiology: trends, opportunities, and challenges.

Authors:  Mukesh Verma; Scott Rogers; Rao L Divi; Sheri D Schully; Stefanie Nelson; L Joseph Su; Sharon A Ross; Susan Pilch; Deborah M Winn; Muin J Khoury
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2013-12-10       Impact factor: 4.254

6.  The tumor suppressor gene DAPK2 is induced by the myeloid transcription factors PU.1 and C/EBPα during granulocytic differentiation but repressed by PML-RARα in APL.

Authors:  Magali Humbert; Elena A Federzoni; Adrian Britschgi; Anna M Schläfli; Peter J M Valk; Thomas Kaufmann; Torsten Haferlach; Gerhard Behre; Hans-Uwe Simon; Bruce E Torbett; Martin F Fey; Mario P Tschan
Journal:  J Leukoc Biol       Date:  2013-09-13       Impact factor: 4.962

7.  Epigenetics meets genetics in acute myeloid leukemia: clinical impact of a novel seven-gene score.

Authors:  Guido Marcucci; Pearlly Yan; Kati Maharry; David Frankhouser; Deedra Nicolet; Klaus H Metzeler; Jessica Kohlschmidt; Krzysztof Mrózek; Yue-Zhong Wu; Donna Bucci; John P Curfman; Susan P Whitman; Ann-Kathrin Eisfeld; Jason H Mendler; Sebastian Schwind; Heiko Becker; Constance Bär; Andrew J Carroll; Maria R Baer; Meir Wetzler; Thomas H Carter; Bayard L Powell; Jonathan E Kolitz; John C Byrd; Christoph Plass; Ramiro Garzon; Michael A Caligiuri; Richard M Stone; Stefano Volinia; Ralf Bundschuh; Clara D Bloomfield
Journal:  J Clin Oncol       Date:  2013-12-30       Impact factor: 44.544

8.  Epigenetic priming of AML blasts for all-trans retinoic acid-induced differentiation by the HDAC class-I selective inhibitor entinostat.

Authors:  Nadja Blagitko-Dorfs; Yi Jiang; Jesús Duque-Afonso; Jan Hiller; Arzu Yalcin; Gabriele Greve; Mahmoud Abdelkarim; Björn Hackanson; Michael Lübbert
Journal:  PLoS One       Date:  2013-10-08       Impact factor: 3.240

9.  Karyotype and DNA-Methylation Responses in Myelodysplastic Syndromes following Treatment with Traditional Chinese Formula Containing Arsenic.

Authors:  Sun Shuzhen; Ma Rou; Hu Xiaomei; Yang Xiao-Hong; Xu Yong-Gang; Wang Hongzhi; Yang Xiu-Peng
Journal:  Evid Based Complement Alternat Med       Date:  2012-10-16       Impact factor: 2.629

10.  Genome-wide DNA methylation analysis reveals a potential mechanism for the pathogenesis and development of uterine leiomyomas.

Authors:  Ryo Maekawa; Shun Sato; Yoshiaki Yamagata; Hiromi Asada; Isao Tamura; Lifa Lee; Maki Okada; Hiroshi Tamura; Eiichi Takaki; Akira Nakai; Norihiro Sugino
Journal:  PLoS One       Date:  2013-06-20       Impact factor: 3.240

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