Literature DB >> 24297480

Genome engineering of Agrobacterium tumefaciens using the lambda Red recombination system.

Shengbiao Hu1, Jun Fu, Fan Huang, Xuezhi Ding, A Francis Stewart, Liqiu Xia, Youming Zhang.   

Abstract

Agrobacterium tumefaciens has been widely used as a tool for transgenesis in plants. The availability of its genome sequence should facilitate the directed engineering of improved properties; however, the current genome engineering options are laborious. Here, we investigated whether the lambda Red operon can be applied for recombineering of the A. tumefaciens genome. First, we built an expression plasmid for A. tumefaciens employing a tetracycline-inducible promoter to regulate the Red operon. This multicopy plasmid was then itself modified in A. tumefaciens to verify that the Red operon was functional. Then, we modified the endogenous A. tumefaciens tumor-inducing plasmid and the linear chromosome. These results extend recombineering technology to a new host and indicate a fast and convenient way to engineer the A. tumefaciens genome for functional genomics and strain improvements.

Entities:  

Mesh:

Year:  2013        PMID: 24297480     DOI: 10.1007/s00253-013-5412-x

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  14 in total

Review 1.  Modern and simple construction of plasmid: saving time and cost.

Authors:  Hideki Nakayama; Nobuo Shimamoto
Journal:  J Microbiol       Date:  2014-10-31       Impact factor: 3.422

2.  CRISPR/Cas9-Assisted Seamless Genome Editing in Lactobacillus plantarum and Its Application in N-Acetylglucosamine Production.

Authors:  Ding Zhou; Zhennan Jiang; Qingxiao Pang; Yuan Zhu; Qian Wang; Qingsheng Qi
Journal:  Appl Environ Microbiol       Date:  2019-10-16       Impact factor: 4.792

3.  Efficient CRISPR-mediated base editing in Agrobacterium spp.

Authors:  Savio D Rodrigues; Mansour Karimi; Lennert Impens; Els Van Lerberge; Griet Coussens; Stijn Aesaert; Debbie Rombaut; Dominique Holtappels; Heba M M Ibrahim; Marc Van Montagu; Jeroen Wagemans; Thomas B Jacobs; Barbara De Coninck; Laurens Pauwels
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

4.  Efficient Construction of Large Genomic Deletion in Agrobacterium tumefaciens by Combination of Cre/loxP System and Triple Recombineering.

Authors:  Zhengqiang Liu; Yali Xie; Xu Zhang; Xiaofeng Hu; Yusheng Li; Xuezhi Ding; Liqiu Xia; Shengbiao Hu
Journal:  Curr Microbiol       Date:  2016-01-07       Impact factor: 2.188

5.  Development of a New Recombineering System for Agrobacterium Species.

Authors:  Zhilong Bian; Shanshan Li; Runyu Yang; Jia Yin; Youming Zhang; Qiang Tu; Jun Fu; Ruijuan Li
Journal:  Appl Environ Microbiol       Date:  2022-01-19       Impact factor: 5.005

6.  Prophage recombinases-mediated genome engineering in Lactobacillus plantarum.

Authors:  Peng Yang; Jing Wang; Qingsheng Qi
Journal:  Microb Cell Fact       Date:  2015-10-05       Impact factor: 5.328

7.  A new recombineering system for Photorhabdus and Xenorhabdus.

Authors:  Jia Yin; Hongbo Zhu; Liqiu Xia; Xuezhi Ding; Thomas Hoffmann; Michael Hoffmann; Xiaoying Bian; Rolf Müller; Jun Fu; A Francis Stewart; Youming Zhang
Journal:  Nucleic Acids Res       Date:  2014-12-24       Impact factor: 16.971

8.  DNA annealing by Redβ is insufficient for homologous recombination and the additional requirements involve intra- and inter-molecular interactions.

Authors:  Sivaraman Subramaniam; Axel Erler; Jun Fu; Andrea Kranz; Jing Tang; Mohanraj Gopalswamy; Saminathan Ramakrishnan; Adrian Keller; Guido Grundmeier; Daniel Müller; Michael Sattler; A Francis Stewart
Journal:  Sci Rep       Date:  2016-10-06       Impact factor: 4.379

9.  Discovery of recombinases enables genome mining of cryptic biosynthetic gene clusters in Burkholderiales species.

Authors:  Xue Wang; Haibo Zhou; Hanna Chen; Xiaoshu Jing; Wentao Zheng; Ruijuan Li; Tao Sun; Jiaqi Liu; Jun Fu; Liujie Huo; Yue-Zhong Li; Yuemao Shen; Xiaoming Ding; Rolf Müller; Xiaoying Bian; Youming Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-16       Impact factor: 11.205

10.  Room temperature electrocompetent bacterial cells improve DNA transformation and recombineering efficiency.

Authors:  Qiang Tu; Jia Yin; Jun Fu; Jennifer Herrmann; Yuezhong Li; Yulong Yin; A Francis Stewart; Rolf Müller; Youming Zhang
Journal:  Sci Rep       Date:  2016-04-20       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.