Literature DB >> 24287647

First report on the occurrence of the uncultivated cluster 2 Frankia microsymbionts in soil outside the native actinorhizal host range area.

Imen Nouioui1, Imed Sbissi, Faten Ghodhbane-Gtari, Kawtar Fikri Benbrahim, Philippe Normand, Maher Gtari.   

Abstract

The occurrence of uncultivated Frankia was evaluated in Tunisian soils by a plant-trapping assay using Coriaria myrtifolia seedlings. Despite the lack of this compatible host plant for more than two centuries, soil-borne Frankia cells were detected in one sampled soil as shown by the development of root nodules on 2-year-old seedlings. Based on glnA sequences, Tunisian trapped Frankia strains belong to the uncultivated cluster 2 strains that associate with other Coriaria species and also with Ceanothus, Datisca and Rosaceae actinorhizal species. This is the first report on the occurrence of Frankia cluster 2 strains in soils from areas lacking compatible host plant groups.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24287647     DOI: 10.1007/s12038-013-9366-z

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  10 in total

1.  The nodular endophytes of Coriaria spp. form a distinct lineage within the genus Frankia.

Authors:  G Nick; E Paget; P Simonet; A Moiroud; P Normand
Journal:  Mol Ecol       Date:  1992-10       Impact factor: 6.185

2.  Isolation of Elaeagnus-compatible Frankia from soils collected in Tunisia.

Authors:  Maher Gtari; Lorenzo Brusetti; Gharbi Skander; Diego Mora; Abdellatif Boudabous; Daniele Daffonchio
Journal:  FEMS Microbiol Lett       Date:  2004-05-15       Impact factor: 2.742

3.  Assessing the phylogeny of Frankia-actinorhizal plant nitrogen-fixing root nodule symbioses with Frankia 16S rRNA and glutamine synthetase gene sequences.

Authors:  Michael L Clawson; Aaron Bourret; David R Benson
Journal:  Mol Phylogenet Evol       Date:  2004-04       Impact factor: 4.286

4.  Genome sequence of "Candidatus Frankia datiscae" Dg1, the uncultured microsymbiont from nitrogen-fixing root nodules of the dicot Datisca glomerata.

Authors:  Tomas Persson; David R Benson; Philippe Normand; Brian Vanden Heuvel; Petar Pujic; Olga Chertkov; Hazuki Teshima; David C Bruce; Chris Detter; Roxanne Tapia; Shunsheng Han; James Han; Tanja Woyke; Sam Pitluck; Len Pennacchio; Matt Nolan; Natalia Ivanova; Amrita Pati; Miriam L Land; Katharina Pawlowski; Alison M Berry
Journal:  J Bacteriol       Date:  2011-12       Impact factor: 3.490

5.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Molecular phylogeny of the genus Frankia and related genera and emendation of the family Frankiaceae.

Authors:  P Normand; S Orso; B Cournoyer; P Jeannin; C Chapelon; J Dawson; L Evtushenko; A K Misra
Journal:  Int J Syst Bacteriol       Date:  1996-01

8.  Phylogeny of members of the Frankia genus based on gyrB, nifH and glnII sequences.

Authors:  Imen Nouioui; Faten Ghodhbane-Gtari; Nicholas J Beauchemin; Louis S Tisa; Maher Gtari
Journal:  Antonie Van Leeuwenhoek       Date:  2011-06-29       Impact factor: 2.271

9.  Geographic distribution and genetic diversity of Ceanothus-infective Frankia strains.

Authors:  N J Ritchie; D D Myrold
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

10.  Genetic diversity of Datisca cannabina-compatible Frankia strains as determined by sequence analysis of the PCR-amplified 16S rRNA gene.

Authors:  M S Mirza; S Hameed; A D Akkermans
Journal:  Appl Environ Microbiol       Date:  1994-07       Impact factor: 4.792

  10 in total
  4 in total

1.  Sybr Green- and TaqMan-Based Quantitative PCR Approaches Allow Assessment of the Abundance and Relative Distribution of Frankia Clusters in Soils.

Authors:  Seifeddine Ben Tekaya; Abirama Sundari Ganesan; Trina Guerra; Jeffrey O Dawson; Michael R J Forstner; Dittmar Hahn
Journal:  Appl Environ Microbiol       Date:  2017-02-15       Impact factor: 4.792

2.  The Influence of the Host Plant Is the Major Ecological Determinant of the Presence of Nitrogen-Fixing Root Nodule Symbiont Cluster II Frankia Species in Soil.

Authors:  Kai Battenberg; Jannah A Wren; Janell Hillman; Joseph Edwards; Liujing Huang; Alison M Berry
Journal:  Appl Environ Microbiol       Date:  2016-12-15       Impact factor: 4.792

3.  Candidatus Frankia Datiscae Dg1, the Actinobacterial Microsymbiont of Datisca glomerata, Expresses the Canonical nod Genes nodABC in Symbiosis with Its Host Plant.

Authors:  Tomas Persson; Kai Battenberg; Irina V Demina; Theoden Vigil-Stenman; Brian Vanden Heuvel; Petar Pujic; Marc T Facciotti; Elizabeth G Wilbanks; Anna O'Brien; Pascale Fournier; Maria Antonia Cruz Hernandez; Alberto Mendoza Herrera; Claudine Médigue; Philippe Normand; Katharina Pawlowski; Alison M Berry
Journal:  PLoS One       Date:  2015-05-28       Impact factor: 3.240

4.  Absence of cospeciation between the uncultured Frankia microsymbionts and the disjunct actinorhizal Coriaria species.

Authors:  Imen Nouioui; Faten Ghodhbane-Gtari; Maria P Fernandez; Abdellatif Boudabous; Philippe Normand; Maher Gtari
Journal:  Biomed Res Int       Date:  2014-04-22       Impact factor: 3.411

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.