Literature DB >> 24283407

Self-assembly of left- and right-handed molecular screws.

Fei Xu1, I John Khan, Kenneth McGuinness, Avanish S Parmar, Teresita Silva, N Sanjeeva Murthy, Vikas Nanda.   

Abstract

Stereoselectivity is a hallmark of biomolecular processes from catalysis to self-assembly, which predominantly occur between homochiral species. However, both homochiral and heterochiral complexes of synthetic polypeptides have been observed where stereoselectivity hinges on details of intermolecular interactions. This raises the question whether general rules governing stereoselectivity exist. A geometric ridges-in-grooves model of interacting helices indicates that heterochiral associations should generally be favored in this class of structures. We tested this principle using a simplified molecular screw, a collagen peptide triple-helix composed of either l- or d-proline with a cyclic aliphatic side chain. Calculated stabilities of like- and opposite-handed triple-helical pairings indicated a preference for heterospecific associations. Mixing left- and right-handed helices drastically lowered solubility, resulting in micrometer-scale sheet-like assemblies that were one peptide-length thick as characterized with atomic force microscopy. X-ray scattering measurements of interhelical spacing in these sheets support a tight ridges-in-grooves packing of left- and right-handed triple helices.

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Year:  2013        PMID: 24283407      PMCID: PMC3897242          DOI: 10.1021/ja4106545

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  26 in total

1.  A chiroselective peptide replicator.

Authors:  A Saghatelian; Y Yokobayashi; K Soltani; M R Ghadiri
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  Chirality-independent protein-protein recognition between transmembrane domains in vivo.

Authors:  Doron Gerber; Yechiel Shai
Journal:  J Mol Biol       Date:  2002-09-20       Impact factor: 5.469

3.  A designed protein with packing between left-handed and right-handed helices.

Authors:  S K Sia; P S Kim
Journal:  Biochemistry       Date:  2001-07-31       Impact factor: 3.162

4.  Characterization of fibrous forms of collagen.

Authors:  B Brodsky; E F Eikenberry
Journal:  Methods Enzymol       Date:  1982       Impact factor: 1.600

5.  Helix to helix packing in proteins.

Authors:  C Chothia; M Levitt; D Richardson
Journal:  J Mol Biol       Date:  1981-01-05       Impact factor: 5.469

6.  Dehydrophenylalanine zippers: strong helix-helix clamping through a network of weak interactions.

Authors:  Udupi A Ramagopal; Suryanarayanarao Ramakumar; Puniti Mathur; Ratanmani Joshi; Virander S Chauhan
Journal:  Protein Eng       Date:  2002-04

7.  Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3).

Authors:  Rita Berisio; Luigi Vitagliano; Lelio Mazzarella; Adriana Zagari
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

8.  Hierarchical assembly of collagen peptide triple helices into curved disks and metal ion-promoted hollow spheres.

Authors:  David E Przybyla; Charles M Rubert Pérez; Jeremy Gleaton; Vikas Nandwana; Jean Chmielewski
Journal:  J Am Chem Soc       Date:  2013-02-25       Impact factor: 15.419

9.  Enantioselective molecular recognition between beta-sheets.

Authors:  De Michael Chung; James S Nowick
Journal:  J Am Chem Soc       Date:  2004-03-17       Impact factor: 15.419

Review 10.  Global regulatory registration requirements for collagen-based combination products: points to consider.

Authors:  Judith E O'Grady; Diana M Bordon
Journal:  Adv Drug Deliv Rev       Date:  2003-11-28       Impact factor: 15.470

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  13 in total

1.  High-resolution structures of a heterochiral coiled coil.

Authors:  David E Mortenson; Jay D Steinkruger; Dale F Kreitler; Dominic V Perroni; Gregory P Sorenson; Lijun Huang; Ritesh Mittal; Hyun Gi Yun; Benjamin R Travis; Mahesh K Mahanthappa; Katrina T Forest; Samuel H Gellman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

2.  Empirical estimation of local dielectric constants: Toward atomistic design of collagen mimetic peptides.

Authors:  Douglas H Pike; Vikas Nanda
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

Review 3.  Geometrical frustration as a potential design principle for peptide-based assemblies.

Authors:  Tao Jiang; Elizabeth L Magnotti; Vincent P Conticello
Journal:  Interface Focus       Date:  2017-10-20       Impact factor: 3.906

4.  Fluorous Phase-Directed Peptide Assembly Affords Nano-Peptisomes Capable of Ultrasound-Triggered Cellular Delivery.

Authors:  Scott H Medina; Megan S Michie; Stephen E Miller; Martin J Schnermann; Joel P Schneider
Journal:  Angew Chem Int Ed Engl       Date:  2017-08-16       Impact factor: 15.336

5.  Self-Assembly of an α-Helical Peptide into a Crystalline Two-Dimensional Nanoporous Framework.

Authors:  Elizabeth L Magnotti; Spencer A Hughes; Rebecca S Dillard; Shengyuan Wang; Lillian Hough; Arshad Karumbamkandathil; Tianquan Lian; Joseph S Wall; Xiaobing Zuo; Elizabeth R Wright; Vincent P Conticello
Journal:  J Am Chem Soc       Date:  2016-12-12       Impact factor: 15.419

Review 6.  Biomaterials via peptide assembly: Design, characterization, and application in tissue engineering.

Authors:  Vincent P Gray; Connor D Amelung; Israt Jahan Duti; Emma G Laudermilch; Rachel A Letteri; Kyle J Lampe
Journal:  Acta Biomater       Date:  2021-10-25       Impact factor: 8.947

7.  Braiding, branching and chiral amplification of nanofibres in supramolecular gels.

Authors:  Christopher D Jones; Henry T D Simmons; Kate E Horner; Kaiqiang Liu; Richard L Thompson; Jonathan W Steed
Journal:  Nat Chem       Date:  2019-03-04       Impact factor: 24.427

8.  Morphological diversity and polymorphism of self-assembling collagen peptides controlled by length of hydrophobic domains.

Authors:  Kenneth McGuinness; I John Khan; Vikas Nanda
Journal:  ACS Nano       Date:  2014-11-17       Impact factor: 15.881

9.  Molecular, Local, and Network-Level Basis for the Enhanced Stiffness of Hydrogel Networks Formed from Coassembled Racemic Peptides: Predictions from Pauling and Corey.

Authors:  Katelyn Nagy-Smith; Peter J Beltramo; Eric Moore; Robert Tycko; Eric M Furst; Joel P Schneider
Journal:  ACS Cent Sci       Date:  2017-05-31       Impact factor: 14.553

10.  Molecular Self-Assembly Strategy for Generating Catalytic Hybrid Polypeptides.

Authors:  Yoshiaki Maeda; Justin Fang; Yasuhiro Ikezoe; Douglas H Pike; Vikas Nanda; Hiroshi Matsui
Journal:  PLoS One       Date:  2016-04-26       Impact factor: 3.240

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