Literature DB >> 24277131

5S-rRNA genes in rice embryos.

N Hariharan1, P S Reddy, J D Padayatty.   

Abstract

The 5S-rRNA from the ungerminated and 48-h-germinated rice embryos differs from the wheat, rye and maize by two nucleotides. The 48-h-germinated embryos contain another species of 5S-rRNA which differs by 3 nucleotides from the ungerminated embryos, thereby showing the expression of two 5S-rRNA genes during germination. The 5S-rRNA genes are present in tandem repeats of a 0.3-kb sequence with some length heterogeneity in the rice genome. The 5S-rRNA gene that was sequenced is identical to that of wheat and maize, except for two nucleotides, C and T, which are interchanged at positions 107 and 117. The insert of continuous 5S-rRNA gene in pBR322 was transcribed in vitro much more efficiently than the discontinuous gene. There was no homology between the 184-bp spacer sequence of 5S-rRNA genes in rice and other systems except the presence of the oligo(T) transcription terminator sequence.

Entities:  

Year:  1987        PMID: 24277131     DOI: 10.1007/BF00015876

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  25 in total

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2.  Cloning of rice DNA & identification of the cloned H2A, H2B & H4 histone genes.

Authors:  G Thomas; H A Vasavada; E Zachariah; J D Padayatty
Journal:  Indian J Biochem Biophys       Date:  1983-02       Impact factor: 1.918

3.  Sequence variation and methylation of the flax 5S RNA genes.

Authors:  P B Goldsbrough; T H Ellis; G P Lomonossoff
Journal:  Nucleic Acids Res       Date:  1982-08-11       Impact factor: 16.971

4.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984       Impact factor: 16.971

5.  Transcription of Xenopus 5S ribosomal RNA genes.

Authors:  L J Korn
Journal:  Nature       Date:  1982-01-14       Impact factor: 49.962

6.  A control region in the center of the 5S RNA gene directs specific initiation of transcription: I. The 5' border of the region.

Authors:  S Sakonju; D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

7.  Generalized structures of the 5S ribosomal RNAs.

Authors:  N Delihas; J Andersen
Journal:  Nucleic Acids Res       Date:  1982-11-25       Impact factor: 16.971

8.  A yeast transcription system for the 5S rRNA gene.

Authors:  H van Keulen; D Y Thomas
Journal:  Nucleic Acids Res       Date:  1982-09-11       Impact factor: 16.971

9.  Phosphorylation of Chromatin-associated Proteins in Lemna and Hordeum.

Authors:  L C van Loon; A Trewavas; K S Chapman
Journal:  Plant Physiol       Date:  1975-02       Impact factor: 8.340

10.  Organization and nucleotide sequence of nuclear 5S rRNA genes in yellow lupin (Lupinus luteus).

Authors:  J A Rafalski; M Wiewiorowski; D Söll
Journal:  Nucleic Acids Res       Date:  1982-12-11       Impact factor: 16.971

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  4 in total

1.  Physical mapping of the 5S ribosomal RNA genes on rice chromosome 11.

Authors:  Y Kamisugi; S Nakayama; R Nakajima; H Ohtsubo; E Ohtsubo; K Fukui
Journal:  Mol Gen Genet       Date:  1994-10-28

2.  Analysis of the 5S RNA pool in Arabidopsis thaliana: RNAs are heterogeneous and only two of the genomic 5S loci produce mature 5S RNA.

Authors:  Catherine Cloix; Sylvie Tutois; Yasushi Yukawa; Olivier Mathieu; Claudine Cuvillier; Marie-Claude Espagnol; Georges Picard; Sylvette Tourmente
Journal:  Genome Res       Date:  2002-01       Impact factor: 9.043

3.  Specific transcription and reinitiation of class III genes in wheat embryo nuclei and chromatin.

Authors:  R Furter; B D Hall
Journal:  Plant Mol Biol       Date:  1989-05       Impact factor: 4.076

4.  Evolution of blue-flowered species of genus Linum based on high-throughput sequencing of ribosomal RNA genes.

Authors:  Nadezhda L Bolsheva; Nataliya V Melnikova; Ilya V Kirov; Anna S Speranskaya; Anastasia A Krinitsina; Alexey A Dmitriev; Maxim S Belenikin; George S Krasnov; Valentina A Lakunina; Anastasiya V Snezhkina; Tatiana A Rozhmina; Tatiana E Samatadze; Olga Yu Yurkevich; Svyatoslav A Zoshchuk; Аlexandra V Amosova; Anna V Kudryavtseva; Olga V Muravenko
Journal:  BMC Evol Biol       Date:  2017-12-28       Impact factor: 3.260

  4 in total

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