Literature DB >> 24253443

Colorectal cancer risk variants on 11q23 and 15q13 are associated with unexplained adenomatous polyposis.

Frederik J Hes1, Dina Ruano, Marry Nieuwenhuis, Carli M Tops, Melanie Schrumpf, Maartje Nielsen, Petra E A Huijts, Juul T Wijnen, Anja Wagner, Encarna B Gómez García, Rolf H Sijmons, Fred H Menko, Tom G W Letteboer, Nicoline Hoogerbrugge, Jan Harryvan, Ellen Kampman, Hans Morreau, Hans F A Vasen, Tom van Wezel.   

Abstract

BACKGROUND: Colorectal adenomatous polyposis is associated with a high risk of colorectal cancer (CRC) and is frequently caused by germline mutations in APC or MUTYH. However, in about 20-30% of patients no underlying gene defect can be identified. In this study, we tested if recently identified CRC risk variants play a role in patients with >10 adenomas.
METHODS: We analysed a total of 16 SNPs with a reported association with CRC in a cohort of 252 genetically unexplained index patients with >10 colorectal adenomas and 745 controls. In addition, we collected detailed clinical information from index patients and their first-degree relatives (FDRs).
RESULTS: We found a statistically significant association with two of the variants tested: rs3802842 (at chromosome 11q23, OR=1.60, 95% CI 1.3 to 2.0) and rs4779584 (at chromosome 15q13, OR=1.50, 95% CI 1.2 to 1.9). The majority of index patients (84%) had between 10 and 100 adenomas and 15% had >100 adenomas. Only two index patients (1%), both with >100 adenomas, had FDRs with polyposis. Forty-one per cent of the index patients had one or more FDRs with CRC.
CONCLUSIONS: These SNPs are the first common, low-penetrant variants reported to be associated with adenomatous polyposis not caused by a defect in the APC, MUTYH, POLD1 and POLE genes. Even though familial occurrence of polyposis was very rare, CRC was over-represented in FDRs of polyposis patients and, if confirmed, these relatives will therefore benefit from surveillance.

Entities:  

Keywords:  Cancer: colon; Clinical genetics; Genetic screening/counselling

Mesh:

Year:  2013        PMID: 24253443      PMCID: PMC3889192          DOI: 10.1136/jmedgenet-2013-102000

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  34 in total

1.  Clinical and genetic characterization of classical forms of familial adenomatous polyposis: a Spanish population study.

Authors:  B Rivera; S González; E Sánchez-Tomé; I Blanco; F Mercadillo; R Letón; J Benítez; M Robledo; G Capellá; M Urioste
Journal:  Ann Oncol       Date:  2010-10-05       Impact factor: 32.976

2.  Colorectal cancer susceptibility loci on chromosome 8q23.3 and 11q23.1 as modifiers for disease expression in Lynch syndrome.

Authors:  Bente A Talseth-Palmer; Ingvild S Brenne; Katie A Ashton; Tiffany-Jane Evans; Mary McPhillips; Claire Groombridge; Janina Suchy; Grzegorz Kurzawski; Allan Spigelman; Jan Lubinski; Rodney J Scott
Journal:  J Med Genet       Date:  2010-11-19       Impact factor: 6.318

3.  A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk.

Authors:  Peter Broderick; Luis Carvajal-Carmona; Alan M Pittman; Emily Webb; Kimberley Howarth; Andrew Rowan; Steven Lubbe; Sarah Spain; Kate Sullivan; Sarah Fielding; Emma Jaeger; Jayaram Vijayakrishnan; Zoe Kemp; Maggie Gorman; Ian Chandler; Elli Papaemmanuil; Steven Penegar; Wendy Wood; Gabrielle Sellick; Mobshra Qureshi; Ana Teixeira; Enric Domingo; Ella Barclay; Lynn Martin; Oliver Sieber; David Kerr; Richard Gray; Julian Peto; Jean-Baptiste Cazier; Ian Tomlinson; Richard S Houlston
Journal:  Nat Genet       Date:  2007-10-14       Impact factor: 38.330

4.  Singapore familial adenomatous polyposis (FAP) patients with classical adenomatous polyposis but undetectable APC mutations have accelerated cancer progression.

Authors:  Xia Cao; Yi Hong; Kong Weng Eu; Carol Loi; Peh Yean Cheah
Journal:  Am J Gastroenterol       Date:  2006-10-06       Impact factor: 10.864

5.  Unexplained polyposis: a challenge for geneticists, pathologists and gastroenterologists.

Authors:  C Mongin; F Coulet; J H Lefevre; C Colas; M Svrcek; M Eyries; Y Lahely; J-F Fléjou; F Soubrier; Y Parc
Journal:  Clin Genet       Date:  2011-05-04       Impact factor: 4.438

6.  Germline mutations in APC and MUTYH are responsible for the majority of families with attenuated familial adenomatous polyposis.

Authors:  M Nielsen; F J Hes; F M Nagengast; M M Weiss; E M Mathus-Vliegen; H Morreau; M H Breuning; J T Wijnen; C M J Tops; H F A Vasen
Journal:  Clin Genet       Date:  2007-05       Impact factor: 4.438

7.  Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.

Authors:  Richard S Houlston; Emily Webb; Peter Broderick; Alan M Pittman; Maria Chiara Di Bernardo; Steven Lubbe; Ian Chandler; Jayaram Vijayakrishnan; Kate Sullivan; Steven Penegar; Luis Carvajal-Carmona; Kimberley Howarth; Emma Jaeger; Sarah L Spain; Axel Walther; Ella Barclay; Lynn Martin; Maggie Gorman; Enric Domingo; Ana S Teixeira; David Kerr; Jean-Baptiste Cazier; Iina Niittymäki; Sari Tuupanen; Auli Karhu; Lauri A Aaltonen; Ian P M Tomlinson; Susan M Farrington; Albert Tenesa; James G D Prendergast; Rebecca A Barnetson; Roseanne Cetnarskyj; Mary E Porteous; Paul D P Pharoah; Thibaud Koessler; Jochen Hampe; Stephan Buch; Clemens Schafmayer; Jurgen Tepel; Stefan Schreiber; Henry Völzke; Jenny Chang-Claude; Michael Hoffmeister; Hermann Brenner; Brent W Zanke; Alexandre Montpetit; Thomas J Hudson; Steven Gallinger; Harry Campbell; Malcolm G Dunlop
Journal:  Nat Genet       Date:  2008-11-16       Impact factor: 38.330

8.  Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk.

Authors:  Emma Jaeger; Emily Webb; Kimberley Howarth; Luis Carvajal-Carmona; Andrew Rowan; Peter Broderick; Axel Walther; Sarah Spain; Alan Pittman; Zoe Kemp; Kate Sullivan; Karl Heinimann; Steven Lubbe; Enric Domingo; Ella Barclay; Lynn Martin; Maggie Gorman; Ian Chandler; Jayaram Vijayakrishnan; Wendy Wood; Elli Papaemmanuil; Steven Penegar; Mobshra Qureshi; Susan Farrington; Albert Tenesa; Jean-Baptiste Cazier; David Kerr; Richard Gray; Julian Peto; Malcolm Dunlop; Harry Campbell; Huw Thomas; Richard Houlston; Ian Tomlinson
Journal:  Nat Genet       Date:  2007-12-16       Impact factor: 38.330

9.  Investigation of pathogenic mechanisms in multiple colorectal adenoma patients without germline APC or MYH/MUTYH mutations.

Authors:  C Thirlwell; K M Howarth; S Segditsas; G Guerra; H J W Thomas; R K S Phillips; I C Talbot; M Gorman; M R Novelli; O M Sieber; I P M Tomlinson
Journal:  Br J Cancer       Date:  2007-05-15       Impact factor: 7.640

10.  Hereditary mixed polyposis syndrome is caused by a 40-kb upstream duplication that leads to increased and ectopic expression of the BMP antagonist GREM1.

Authors:  Emma Jaeger; Simon Leedham; Annabelle Lewis; Stefania Segditsas; Martin Becker; Pedro Rodenas Cuadrado; Hayley Davis; Kulvinder Kaur; Karl Heinimann; Kimberley Howarth; James East; Jenny Taylor; Huw Thomas; Ian Tomlinson
Journal:  Nat Genet       Date:  2012-05-06       Impact factor: 38.330

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  14 in total

1.  Rare loss of function variants in candidate genes and risk of colorectal cancer.

Authors:  Elisabeth A Rosenthal; Brian H Shirts; Laura M Amendola; Martha Horike-Pyne; Peggy D Robertson; Fuki M Hisama; Robin L Bennett; Michael O Dorschner; Deborah A Nickerson; Ian B Stanaway; Rami Nassir; Kathy T Vickers; Christopher Li; William M Grady; Ulrike Peters; Gail P Jarvik
Journal:  Hum Genet       Date:  2018-09-28       Impact factor: 4.132

Review 2.  Clinical management of hereditary colorectal cancer syndromes.

Authors:  Hans F A Vasen; Ian Tomlinson; Antoni Castells
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2015-01-13       Impact factor: 46.802

3.  Exome Sequencing Identifies Biallelic MSH3 Germline Mutations as a Recessive Subtype of Colorectal Adenomatous Polyposis.

Authors:  Ronja Adam; Isabel Spier; Bixiao Zhao; Michael Kloth; Jonathan Marquez; Inga Hinrichsen; Jutta Kirfel; Aylar Tafazzoli; Sukanya Horpaopan; Siegfried Uhlhaas; Dietlinde Stienen; Nicolaus Friedrichs; Janine Altmüller; Andreas Laner; Stefanie Holzapfel; Sophia Peters; Katrin Kayser; Holger Thiele; Elke Holinski-Feder; Giancarlo Marra; Glen Kristiansen; Markus M Nöthen; Reinhard Büttner; Gabriela Möslein; Regina C Betz; Angela Brieger; Richard P Lifton; Stefan Aretz
Journal:  Am J Hum Genet       Date:  2016-07-28       Impact factor: 11.025

4.  Common genetic variants (rs4779584 and rs10318) at 15q13.3 contributes to colorectal adenoma and colorectal cancer susceptibility: evidence based on 22 studies.

Authors:  Lin Tu; Bin Yan; Zhiyong Peng
Journal:  Mol Genet Genomics       Date:  2014-12-05       Impact factor: 3.291

5.  Declining detection rates for APC and biallelic MUTYH variants in polyposis patients, implications for DNA testing policy.

Authors:  Diantha Terlouw; Manon Suerink; Sunny S Singh; Hans J J P Gille; Frederik J Hes; Alexandra M J Langers; Hans Morreau; Hans F A Vasen; Yvonne J Vos; Tom van Wezel; Carli M Tops; Sanne W Ten Broeke; Maartje Nielsen
Journal:  Eur J Hum Genet       Date:  2019-09-16       Impact factor: 4.246

6.  Germline variants in POLE are associated with early onset mismatch repair deficient colorectal cancer.

Authors:  Fadwa A Elsayed; C Marleen Kets; Dina Ruano; Brendy van den Akker; Arjen R Mensenkamp; Melanie Schrumpf; Maartje Nielsen; Juul T Wijnen; Carli M Tops; Marjolijn J Ligtenberg; Hans F A Vasen; Frederik J Hes; Hans Morreau; Tom van Wezel
Journal:  Eur J Hum Genet       Date:  2014-11-05       Impact factor: 4.246

7.  Clinical relevance of 8q23, 15q13 and 18q21 SNP genotyping to evaluate colorectal cancer risk.

Authors:  Stéphanie Baert-Desurmont; Françoise Charbonnier; Estelle Houivet; Lorena Ippolito; Jacques Mauillon; Marion Bougeard; Caroline Abadie; David Malka; Jacqueline Duffour; Françoise Desseigne; Chrystelle Colas; Pascal Pujol; Sophie Lejeune; Catherine Dugast; Bruno Buecher; Laurence Faivre; Dominique Leroux; Paul Gesta; Isabelle Coupier; Rosine Guimbaud; Pascaline Berthet; Sylvie Manouvrier; Estelle Cauchin; Fabienne Prieur; Pierre Laurent-Puig; Marine Lebrun; Philippe Jonveaux; Jean Chiesa; Olivier Caron; Marie-Emmanuelle Morin-Meschin; Florence Polycarpe-Osaer; Sophie Giraud; Aziz Zaanan; Delphine Bonnet; Ludovic Mansuy; Valérie Bonadona; Salima El Chehadeh; François Duhoux; Marion Gauthier-Villars; Jean-Christophe Saurin; Marie-Agnès Collonge-Rame; Laurence Brugières; Qing Wang; Brigitte Bressac-de Paillerets; Jean-Marc Rey; Christine Toulas; Marie-Pierre Buisine; Myriam Bronner; Joanna Sokolowska; Agnès Hardouin; Anne-Françoise Cailleux; Hakim Sebaoui; Julien Blot; Julie Tinat; Jacques Benichou; Thierry Frebourg
Journal:  Eur J Hum Genet       Date:  2015-04-15       Impact factor: 4.246

8.  Copy number variants associated with 18p11.32, DCC and the promoter 1B region of APC in colorectal polyposis patients.

Authors:  Amy L Masson; Bente A Talseth-Palmer; Tiffany-Jane Evans; Patrick McElduff; Allan D Spigelman; Garry N Hannan; Rodney J Scott
Journal:  Meta Gene       Date:  2015-12-24

9.  Common colorectal cancer risk alleles contribute to the multiple colorectal adenoma phenotype, but do not influence colonic polyposis in FAP.

Authors:  Timothy H T Cheng; Maggie Gorman; Lynn Martin; Ella Barclay; Graham Casey; Brian Saunders; Huw Thomas; Sue Clark; Ian Tomlinson
Journal:  Eur J Hum Genet       Date:  2014-05-07       Impact factor: 4.246

10.  Colorectal cancer risk variants at 8q23.3 and 11q23.1 are associated with disease phenotype in APC mutation carriers.

Authors:  Z Ghorbanoghli; M H Nieuwenhuis; J J Houwing-Duistermaat; S Jagmohan-Changur; F J Hes; C M Tops; A Wagner; C M Aalfs; S Verhoef; E B Gómez García; R H Sijmons; F H Menko; T G Letteboer; N Hoogerbrugge; T van Wezel; H F A Vasen; J T Wijnen
Journal:  Fam Cancer       Date:  2016-10       Impact factor: 2.375

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