Literature DB >> 24242254

New model for electron flow for sulfate reduction in Desulfovibrio alaskensis G20.

Kimberly L Keller1, Barbara J Rapp-Giles, Elizabeth S Semkiw, Iris Porat, Steven D Brown, Judy D Wall.   

Abstract

To understand the energy conversion activities of the anaerobic sulfate-reducing bacteria, it is necessary to identify the components involved in electron flow. The importance of the abundant type I tetraheme cytochrome c3 (TpIc3) as an electron carrier during sulfate respiration was questioned by the previous isolation of a null mutation in the gene encoding TpIc3, cycA, in Desulfovibrio alaskensis G20. Whereas respiratory growth of the CycA mutant with lactate and sulfate was little affected, growth with pyruvate and sulfate was significantly impaired. We have explored the phenotype of the CycA mutant through physiological tests and transcriptomic and proteomic analyses. Data reported here show that electrons from pyruvate oxidation do not reach adenylyl sulfate reductase, the enzyme catalyzing the first redox reaction during sulfate reduction, in the absence of either CycA or the type I cytochrome c3:menaquinone oxidoreductase transmembrane complex, QrcABCD. In contrast to the wild type, the CycA and QrcA mutants did not grow with H2 or formate and sulfate as the electron acceptor. Transcriptomic and proteomic analyses of the CycA mutant showed that transcripts and enzymes for the pathway from pyruvate to succinate were strongly decreased in the CycA mutant regardless of the growth mode. Neither the CycA nor the QrcA mutant grew on fumarate alone, consistent with the omics results and a redox regulation of gene expression. We conclude that TpIc3 and the Qrc complex are D. alaskensis components essential for the transfer of electrons released in the periplasm to reach the cytoplasmic adenylyl sulfate reductase and present a model that may explain the CycA phenotype through confurcation of electrons.

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Year:  2013        PMID: 24242254      PMCID: PMC3911205          DOI: 10.1128/AEM.02963-13

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  41 in total

1.  Effect of the deletion of qmoABC and the promoter-distal gene encoding a hypothetical protein on sulfate reduction in Desulfovibrio vulgaris Hildenborough.

Authors:  Grant M Zane; Huei-che Bill Yen; Judy D Wall
Journal:  Appl Environ Microbiol       Date:  2010-06-25       Impact factor: 4.792

2.  EPR characterization of the new Qrc complex from sulfate reducing bacteria and its ability to form a supercomplex with hydrogenase and TpIc3.

Authors:  Sofia S Venceslau; Daniela Matos; Inês A C Pereira
Journal:  FEBS Lett       Date:  2011-06-02       Impact factor: 4.124

Review 3.  Energy conservation via electron bifurcating ferredoxin reduction and proton/Na(+) translocating ferredoxin oxidation.

Authors:  Wolfgang Buckel; Rudolf K Thauer
Journal:  Biochim Biophys Acta       Date:  2012-07-16

4.  Growth of sulphate-reducing bacteria by fumarate dismutation.

Authors:  J D Miller; D S Wakerley
Journal:  J Gen Microbiol       Date:  1966-04

5.  Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20.

Authors:  Loren J Hauser; Miriam L Land; Steven D Brown; Frank Larimer; Kimberly L Keller; Barbara J Rapp-Giles; Morgan N Price; Monica Lin; David C Bruce; John C Detter; Roxanne Tapia; Cliff S Han; Lynne A Goodwin; Jan-Fang Cheng; Samuel Pitluck; Alex Copeland; Susan Lucas; Matt Nolan; Alla L Lapidus; Anthony V Palumbo; Judy D Wall
Journal:  J Bacteriol       Date:  2011-06-17       Impact factor: 3.490

6.  Succinate dehydrogenase functioning by a reverse redox loop mechanism and fumarate reductase in sulphate-reducing bacteria.

Authors:  Tanja Zaunmüller; David J Kelly; Frank O Glöckner; Gottfried Unden
Journal:  Microbiology       Date:  2006-08       Impact factor: 2.777

7.  Localization of dehydrogenases, reductases, and electron transfer components in the sulfate-reducing bacterium Desulfovibrio gigas.

Authors:  J M Odom; H D Peck
Journal:  J Bacteriol       Date:  1981-07       Impact factor: 3.490

8.  Characterization of a small plasmid from Desulfovibrio desulfuricans and its use for shuttle vector construction.

Authors:  J D Wall; B J Rapp-Giles; M Rousset
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

9.  Genetic analysis of pigment biosynthesis in Xanthobacter autotrophicus Py2 using a new, highly efficient transposon mutagenesis system that is functional in a wide variety of bacteria.

Authors:  Rachel A Larsen; Marlena M Wilson; Adam M Guss; William W Metcalf
Journal:  Arch Microbiol       Date:  2002-06-18       Impact factor: 2.552

10.  A comparative genomic analysis of energy metabolism in sulfate reducing bacteria and archaea.

Authors:  Inês A Cardoso Pereira; Ana Raquel Ramos; Fabian Grein; Marta Coimbra Marques; Sofia Marques da Silva; Sofia Santos Venceslau
Journal:  Front Microbiol       Date:  2011-04-19       Impact factor: 5.640

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  12 in total

Review 1.  The Role of Localized Acidity Generation in Microbially Influenced Corrosion.

Authors:  Yuriy Kryachko; Sean M Hemmingsen
Journal:  Curr Microbiol       Date:  2017-04-26       Impact factor: 2.188

2.  Rex (encoded by DVU_0916) in Desulfovibrio vulgaris Hildenborough is a repressor of sulfate adenylyl transferase and is regulated by NADH.

Authors:  G A Christensen; G M Zane; A E Kazakov; X Li; D A Rodionov; P S Novichkov; I Dubchak; A P Arkin; J D Wall
Journal:  J Bacteriol       Date:  2014-10-13       Impact factor: 3.490

3.  Gene expression profiling of microbial activities and interactions in sediments under haloclines of E. Mediterranean deep hypersaline anoxic basins.

Authors:  Virginia P Edgcomb; Maria G Pachiadaki; Paraskevi Mara; Konstantinos A Kormas; Edward R Leadbetter; Joan M Bernhard
Journal:  ISME J       Date:  2016-04-19       Impact factor: 10.302

4.  Electron carriers in microbial sulfate reduction inferred from experimental and environmental sulfur isotope fractionations.

Authors:  Christine B Wenk; Boswell A Wing; Itay Halevy
Journal:  ISME J       Date:  2017-10-31       Impact factor: 11.217

5.  Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Authors:  Jennifer V Kuehl; Morgan N Price; Jayashree Ray; Kelly M Wetmore; Zuelma Esquivel; Alexey E Kazakov; Michelle Nguyen; Raquel Kuehn; Ronald W Davis; Terry C Hazen; Adam P Arkin; Adam Deutschbauer
Journal:  MBio       Date:  2014-05-27       Impact factor: 7.867

6.  Genetic basis for nitrate resistance in Desulfovibrio strains.

Authors:  Hannah L Korte; Samuel R Fels; Geoff A Christensen; Morgan N Price; Jennifer V Kuehl; Grant M Zane; Adam M Deutschbauer; Adam P Arkin; Judy D Wall
Journal:  Front Microbiol       Date:  2014-04-21       Impact factor: 5.640

7.  Identification of a cyclic-di-GMP-modulating response regulator that impacts biofilm formation in a model sulfate reducing bacterium.

Authors:  Lara Rajeev; Eric G Luning; Sara Altenburg; Grant M Zane; Edward E K Baidoo; Michela Catena; Jay D Keasling; Judy D Wall; Matthew W Fields; Aindrila Mukhopadhyay
Journal:  Front Microbiol       Date:  2014-07-29       Impact factor: 5.640

8.  The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Authors:  Morgan N Price; Jayashree Ray; Kelly M Wetmore; Jennifer V Kuehl; Stefan Bauer; Adam M Deutschbauer; Adam P Arkin
Journal:  Front Microbiol       Date:  2014-10-31       Impact factor: 5.640

9.  Coordinated response of the Desulfovibrio desulfuricans 27774 transcriptome to nitrate, nitrite and nitric oxide.

Authors:  Ian T Cadby; Matthew Faulkner; Jeanne Cheneby; Justine Long; Jacques van Helden; Alain Dolla; Jeffrey A Cole
Journal:  Sci Rep       Date:  2017-11-24       Impact factor: 4.379

10.  Anion transport as a target of adaption to perchlorate in sulfate-reducing communities.

Authors:  Magdalena K Stoeva; Jennifer Kuehl; Alexey E Kazakov; Ouwei Wang; Rowena Rushton-Green; John D Coates
Journal:  ISME J       Date:  2019-10-28       Impact factor: 10.302

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