Literature DB >> 21685289

Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20.

Loren J Hauser1, Miriam L Land, Steven D Brown, Frank Larimer, Kimberly L Keller, Barbara J Rapp-Giles, Morgan N Price, Monica Lin, David C Bruce, John C Detter, Roxanne Tapia, Cliff S Han, Lynne A Goodwin, Jan-Fang Cheng, Samuel Pitluck, Alex Copeland, Susan Lucas, Matt Nolan, Alla L Lapidus, Anthony V Palumbo, Judy D Wall.   

Abstract

Desulfovibrio alaskensis G20 (formerly Desulfovibrio desulfuricans G20) is a Gram-negative mesophilic sulfate-reducing bacterium (SRB), known to corrode ferrous metals and to reduce toxic radionuclides and metals such as uranium and chromium to sparingly soluble and less toxic forms. We present the 3.7-Mb genome sequence to provide insights into its physiology.

Entities:  

Mesh：

Year:  2011        PMID： 21685289      PMCID： PMC3147700          DOI： 10.1128/JB.05400-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  5 in total

1.  Reduction of uranium by Desulfovibrio desulfuricans.

Authors:  D R Lovley; E J Phillips
Journal:  Appl Environ Microbiol       Date:  1992-03       Impact factor: 4.792

2.  Effect of Phosphate on the Corrosion of Carbon Steel and on the Composition of Corrosion Products in Two-Stage Continuous Cultures of Desulfovibrio desulfuricans.

Authors:  P J Weimer; M J Van Kavelaar; C B Michel; T K Ng
Journal:  Appl Environ Microbiol       Date:  1988-02       Impact factor: 4.792

3.  Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility.

Authors:  Patrick S G Chain; Vincent J Denef; Konstantinos T Konstantinidis; Lisa M Vergez; Loreine Agulló; Valeria Latorre Reyes; Loren Hauser; Macarena Córdova; Luis Gómez; Myriam González; Miriam Land; Victoria Lao; Frank Larimer; John J LiPuma; Eshwar Mahenthiralingam; Stephanie A Malfatti; Christopher J Marx; J Jacob Parnell; Alban Ramette; Paul Richardson; Michael Seeger; Daryl Smith; Theodore Spilker; Woo Jun Sul; Tamara V Tsoi; Luke E Ulrich; Igor B Zhulin; James M Tiedje
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-09       Impact factor: 11.205

4.  Characterization of a small plasmid from Desulfovibrio desulfuricans and its use for shuttle vector construction.

Authors:  J D Wall; B J Rapp-Giles; M Rousset
Journal:  J Bacteriol       Date:  1993-07       Impact factor: 3.490

5.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169
  5 in total
  21 in total

1.  Evidence-based annotation of transcripts and proteins in the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.

Authors:  Morgan N Price; Adam M Deutschbauer; Jennifer V Kuehl; Haichuan Liu; H Ewa Witkowska; Adam P Arkin
Journal:  J Bacteriol       Date:  2011-08-12       Impact factor: 3.490

2.  ArsC3 from Desulfovibrio alaskensis G20, a cation and sulfate-independent highly efficient arsenate reductase.

Authors:  Catarina I P Nunes; Joana L A Brás; Shabir Najmudin; José J G Moura; Isabel Moura; Marta S P Carepo
Journal:  J Biol Inorg Chem       Date:  2014-08-20       Impact factor: 3.358

3.  Changes in metabolic pathways of Desulfovibrio alaskensis G20 cells induced by molybdate excess.

Authors:  Rashmi R Nair; Célia M Silveira; Mário S Diniz; Maria G Almeida; Jose J G Moura; Maria G Rivas
Journal:  J Biol Inorg Chem       Date:  2014-12-09       Impact factor: 3.358

4.  Orange protein from Desulfovibrio alaskensis G20: insights into the Mo-Cu cluster protein-assisted synthesis.

Authors:  Marta S P Carepo; Cíntia Carreira; Raquel Grazina; Małgorzata E Zakrzewska; Alain Dolla; Corinne Aubert; Sofia R Pauleta; José J G Moura; Isabel Moura
Journal:  J Biol Inorg Chem       Date:  2016-01-09       Impact factor: 3.358

5.  New model for electron flow for sulfate reduction in Desulfovibrio alaskensis G20.

Authors:  Kimberly L Keller; Barbara J Rapp-Giles; Elizabeth S Semkiw; Iris Porat; Steven D Brown; Judy D Wall
Journal:  Appl Environ Microbiol       Date:  2013-11-15       Impact factor: 4.792

6.  Genetics and molecular biology of the electron flow for sulfate respiration in desulfovibrio.

Authors:  Kimberly L Keller; Judy D Wall
Journal:  Front Microbiol       Date:  2011-06-29       Impact factor: 5.640

7.  Functional genomics with a comprehensive library of transposon mutants for the sulfate-reducing bacterium Desulfovibrio alaskensis G20.

Authors:  Jennifer V Kuehl; Morgan N Price; Jayashree Ray; Kelly M Wetmore; Zuelma Esquivel; Alexey E Kazakov; Michelle Nguyen; Raquel Kuehn; Ronald W Davis; Terry C Hazen; Adam P Arkin; Adam Deutschbauer
Journal:  MBio       Date:  2014-05-27       Impact factor: 7.867

8.  Metagenomic profiling of antibiotic resistance genes and mobile genetic elements in a tannery wastewater treatment plant.

Authors:  Zhu Wang; Xu-Xiang Zhang; Kailong Huang; Yu Miao; Peng Shi; Bo Liu; Chao Long; Aimin Li
Journal:  PLoS One       Date:  2013-10-01       Impact factor: 3.240

9.  Reconstruction of novel transcription factor regulons through inference of their binding sites.

Authors:  Abdulkadir Elmas; Xiaodong Wang; Michael S Samoilov
Journal:  BMC Bioinformatics       Date:  2015-09-21       Impact factor: 3.169

10.  Global transcriptome analysis of Clostridium thermocellum ATCC 27405 during growth on dilute acid pretreated Populus and switchgrass.

Authors:  Charlotte M Wilson; Miguel Rodriguez; Courtney M Johnson; Stanton L Martin; Tzu Ming Chu; Russ D Wolfinger; Loren J Hauser; Miriam L Land; Dawn M Klingeman; Mustafa H Syed; Arthur J Ragauskas; Timothy J Tschaplinski; Jonathan R Mielenz; Steven D Brown
Journal:  Biotechnol Biofuels       Date:  2013-12-02       Impact factor: 6.040
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.