Literature DB >> 24241458

Nuclear DNA amplification in cultured cells of Oryza sativa L.

K L Zheng1, S Castiglione, M G Biasini, A Biroli, C Morandi, F Sala.   

Abstract

Highly repeated nuclear DNA sequences from suspension cultured cells of Oryza sativa L. cv. 'Roncarolo' have been cloned in pBR322. Ten clones with specific digestion patterns have been randomly selected. Nine sequences appear to be organized in a clustered tandem array while one is interpersed in the rice genome. The clones have been used to gather information on: (a) their modulation in cultured cells as compared to whole plant and (b) their distribution in different rice cultivars belonging to the Japonica or Indica subspecies of Oryza sativa L. Hybridization with nuclear DNA isolated either from suspension or from seedlings of the 'Roncarolo' cultivar revealed extensive quantitative variations, with most cloned sequences showing amplification (up to 75-fold) in cultured cells. Hybridization with nuclear DNA isolated from seedlings or suspension cultured cells from different cultivars belonging to the Japonica or to the Indica sub-species of O. sativa have shown that (a) amplification also occurs in a similar pattern in the case of DNA from the other tested suspension cultured cell types but not in the case of DNA from seedlings; (b) in some cases the tested sequences show minor but significant variations in different rice accessions.

Entities:  

Year:  1987        PMID: 24241458     DOI: 10.1007/BF00290085

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  15 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Species-specific repetitive DNA used to identify interspecific somatic hybrids.

Authors:  M W Saul; I Potrykus
Journal:  Plant Cell Rep       Date:  1984-04       Impact factor: 4.570

3.  A new method for the purification of the different stages of carrot embryoids.

Authors:  G Giuliano; D Rosellini; M Terzi
Journal:  Plant Cell Rep       Date:  1983-08       Impact factor: 4.570

4.  Diversity of Vicia faba circular mtDNA in whole plants and suspension cultures.

Authors:  V I Negruk; G I Eisner; T D Redichkina; N N Dumanskaya; D I Cherny; A A Alexandrov; M F Shemyakin; R G Butenko
Journal:  Theor Appl Genet       Date:  1986-07       Impact factor: 5.699

5.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

6.  Organization and evolution of repeated DNA sequences in closely related plant genomes.

Authors:  I J Evans; A M James; S R Barnes
Journal:  J Mol Biol       Date:  1983-11-15       Impact factor: 5.469

7.  Interrelationship of cultivated rices Oryza sativa and O. glaberrima with wild O. perennis complex : Analysis of fraction 1 protein and some repeated DNA sequences.

Authors:  D Pental; S R Barnes
Journal:  Theor Appl Genet       Date:  1985-05       Impact factor: 5.699

8.  Expression of abbreviated mouse dihydrofolate reductase genes in cultured hamster cells.

Authors:  C S Gasser; C C Simonsen; J W Schilling; R T Schimke
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

9.  Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA.

Authors:  S N Cohen; A C Chang; L Hsu
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

10.  Wheat specific repetitive DNA sequences - construction and characterization of four different genomic clones.

Authors:  M Metzlaff; W Troebner; F Baldauf; R Schlegel; J Cullum
Journal:  Theor Appl Genet       Date:  1986-03       Impact factor: 5.699

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  16 in total

1.  A repeated chromosomal DNA sequence is amplified as a circular extrachromosomal molecule in rice (Oryza sativa L.).

Authors:  E Cuzzoni; L Ferretti; C Giordani; S Castiglione; F Sala
Journal:  Mol Gen Genet       Date:  1990-06

2.  RFLP analysis of Zea mays callus cultures and their regenerated plants.

Authors:  P T Brown; E Göbel; H Lörz
Journal:  Theor Appl Genet       Date:  1991-02       Impact factor: 5.699

3.  Variable copy number DNA sequences in rice.

Authors:  S Kikuchi; F Takaiwa; K Oono
Journal:  Mol Gen Genet       Date:  1987-12

4.  Structure and evolution of a highly repetitive DNA sequence from Brassica napus.

Authors:  X Xia; G Selvaraj; H Bertrand
Journal:  Plant Mol Biol       Date:  1993-01       Impact factor: 4.076

5.  Rapid conversion of rDNA intergenic spacer of diploid mutants of rice derived from gamma-ray irradiated tetraploids.

Authors:  H Fukuoka; Y Kageyama; K Yamamoto; G Takeda
Journal:  Mol Gen Genet       Date:  1994-04

6.  Evidence for genomic changes in transgenic rice (Oryza sativa L.) recovered from protoplasts.

Authors:  P H Bao; S Granata; S Castiglione; G Wang; C Giordani; E Cuzzoni; G Damiani; C Bandi; S K Datta; K Datta; I Potrykus; A Callegarin; F Sala
Journal:  Transgenic Res       Date:  1996-03       Impact factor: 2.788

7.  Distribution and organization of a tandemly repeated 352-bp sequence in the oryzae family.

Authors:  A De Kochko; M C Kiefer; F Cordesse; A S Reddy; M Delseny
Journal:  Theor Appl Genet       Date:  1991-07       Impact factor: 5.699

8.  RAPDs as an aid to evaluate the genetic integrity of somatic embryogenesis-derived populations of Picea mariana (Mill.) B.S.P.

Authors:  N Isabel; L Tremblay; M Michaud; F M Tremblay; J Bousquet
Journal:  Theor Appl Genet       Date:  1993-03       Impact factor: 5.699

9.  Amplification of repetitive DNA from Nicotiana plumbaginifolia in asymmetric somatic hybrids between Nicotiana sylvestris and Nicotiana plumbaginifolia.

Authors:  Y V Kovtun; M A Korostash; Y V Butsko; Y Y Gleba
Journal:  Theor Appl Genet       Date:  1993-04       Impact factor: 5.699

10.  Microgeographic genome size differentiation of the carob tree, Ceratonia siliqua, at 'Evolution Canyon', Israel.

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Journal:  Ann Bot       Date:  2004-03-16       Impact factor: 4.357

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