Literature DB >> 24240758

Different AT-rich satellite DNAs in Cucurbita pepo and Cucurbita maxima.

M Ganal1, V Hemleben.   

Abstract

The AT-rich highly repeated satellite DNA of Cucurbita pepo (zucchini) and Cucurbita maxima (pumpkin) were cloned and their DNA structure was investigated. DNA sequencing revealed that the repeat length of satellite DNA in Cucurbita pepo is 349-352 base pairs. The percentage of AT-base pairs is about 61%. This satellite is highly conserved in restriction enzyme pattern and DNA sequence; sequence heterogeneity is about 10%. In contrast, the satellite DNA of Cucurbita maxima has a repeat length of 168-169 base pairs. This satellite is also rich in AT-base pairs (64%), existing in at least three different variants as revealed by restriction enzyme analysis and DNA sequencing. The sequence heterogeneity between these variants is about 15%. The two satellite DNAs showed no cross-hybridization to each other and sequence homology is only limited. Nevertheless, we found in the C. pepo genome a high amount of sequences resembling the satellite of C. maxima. In contrast, the satellite repeat of C. pepo is found in the C. maxima DNA only in a few copies. These observations were discussed with respect to satellite DNA evolution and compared to the data received from monocotyledonous species.

Entities:  

Year:  1986        PMID: 24240758     DOI: 10.1007/BF00273729

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  23 in total

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Authors:  G P Smith
Journal:  Science       Date:  1976-02-13       Impact factor: 47.728

2.  Sequence analysis of Vicia faba repeated DNA, the FokI repeat element.

Authors:  A Kato; K Yakura; S Tanifuji
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

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Authors:  D L Brutlag
Journal:  Annu Rev Genet       Date:  1980       Impact factor: 16.830

4.  A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

Authors:  J Messing; J Vieira
Journal:  Gene       Date:  1982-10       Impact factor: 3.688

Review 5.  Highly repeated sequences in mammalian genomes.

Authors:  M F Singer
Journal:  Int Rev Cytol       Date:  1982

Review 6.  Nucleotide sequences of highly repeated DNAs; compilation and comments.

Authors:  G L Miklos; A C Gill
Journal:  Genet Res       Date:  1982-02       Impact factor: 1.588

7.  Molecular drive: a cohesive mode of species evolution.

Authors:  G Dover
Journal:  Nature       Date:  1982-09-09       Impact factor: 49.962

8.  Satellite DNA is transcribed on lampbrush chromosomes.

Authors:  J M Varley; H C Macgregor; H P Erba
Journal:  Nature       Date:  1980-02-14       Impact factor: 49.962

9.  Organization of highly repetitive satellite DNA of two Cucurbitaceae species (Cucumis melo and Cucumis sativus).

Authors:  V Hemleben; B Leweke; A Roth; J Stadler
Journal:  Nucleic Acids Res       Date:  1982-01-22       Impact factor: 16.971

10.  Transition stages of molecular drive in multiple-copy DNA families in Drosophila.

Authors:  T Strachan; D Webb; G A Dover
Journal:  EMBO J       Date:  1985-07       Impact factor: 11.598

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  5 in total

1.  Structure and evolution of a highly repetitive DNA sequence from Brassica napus.

Authors:  X Xia; G Selvaraj; H Bertrand
Journal:  Plant Mol Biol       Date:  1993-01       Impact factor: 4.076

2.  Differential homogenization and amplification of two satellite DNAs in the genus Cucurbita (Cucurbitaceae).

Authors:  K King; J Jobst; V Hemleben
Journal:  J Mol Evol       Date:  1995-12       Impact factor: 2.395

3.  Origin of the main class of repetitive DNA within selected Pennisetum species.

Authors:  L D Ingham; W W Hanna; J W Baier; L C Hannah
Journal:  Mol Gen Genet       Date:  1993-04

4.  Molecular and cytogenetic characterization of an AT-rich satellite DNA family in Urvillea chacoensis Hunz. (Paullinieae, Sapindaceae).

Authors:  Juan D Urdampilleta; Anete Pereira de Souza; Dilaine R S Schneider; André L L Vanzela; María S Ferrucci; Eliana R F Martins
Journal:  Genetica       Date:  2008-11-25       Impact factor: 1.082

5.  A genome-specific repeat sequence from kiwifruit (Actinidia deliciosa var. deliciosa).

Authors:  R N Crowhurst; R C Gardner
Journal:  Theor Appl Genet       Date:  1991-01       Impact factor: 5.699

  5 in total

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