Literature DB >> 16627642

Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria.

Cindy H Nakatsu1, Krassimira Hristova2, Satoshi Hanada3, Xian-Ying Meng3, Jessica R Hanson2, Kate M Scow4,2, Yoichi Kamagata3.   

Abstract

A Gram-negative, rod-shaped, motile, non-pigmented, facultative aerobe that grew optimally at pH 6.5 and 30 degrees C (strain PM1T) was isolated for its ability to completely degrade the gasoline additive methyl tert-butyl ether. Analysis of the 16S rRNA gene sequence indicated that this bacterium was a member of the class Betaproteobacteria in the Sphaerotilus-Leptothrix group. The 16S rRNA gene sequence identity to other genera in this group, Leptothrix, Aquabacterium, Roseateles, Sphaerotilus, Ideonella and Rubrivivax, ranged from 93 to 96 %. The chemotaxonomic data including Q-8 as the major quinone, C16 : 1omega7c and C16 : 0 as the major fatty acids and a DNA G+C content of 69 mol%, support the inclusion of strain PM1T in the class Betaproteobacteria. It differed from other members of the Sphaerotilus-Leptothrix group by being a facultative methylotroph that used methanol as a sole carbon source, and by also being able to grow heterotrophically in defined media containing ethanol, toluene, benzene, ethylbenzene and dihydroxybenzoates as sole carbon sources. On the basis of the morphological, physiological, biochemical and genetic information, a new genus and species, Methylibium petroleiphilum gen. nov., sp. nov., is proposed, with PM1T (=ATCC BAA-1232T=LMG 22953T) as the type strain.

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Year:  2006        PMID: 16627642     DOI: 10.1099/ijs.0.63524-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  48 in total

1.  Phyllosphere bacterial community of floating macrophytes in paddy soil environments as revealed by illumina high-throughput sequencing.

Authors:  Wan-Ying Xie; Jian-Qiang Su; Yong-Guan Zhu
Journal:  Appl Environ Microbiol       Date:  2014-10-31       Impact factor: 4.792

2.  Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice.

Authors:  Claudia Knief; Nathanaël Delmotte; Samuel Chaffron; Manuel Stark; Gerd Innerebner; Reiner Wassmann; Christian von Mering; Julia A Vorholt
Journal:  ISME J       Date:  2011-12-22       Impact factor: 10.302

3.  Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier.

Authors:  Thomas Rime; Martin Hartmann; Beat Frey
Journal:  ISME J       Date:  2016-01-15       Impact factor: 10.302

4.  Gene mdpC plays a regulatory role in the methyl-tert-butyl ether degradation pathway of Methylibium petroleiphilum strain PM1.

Authors:  Geetika Joshi; Radomir Schmidt; Kate M Scow; Michael S Denison; Krassimira R Hristova
Journal:  FEMS Microbiol Lett       Date:  2015-02-26       Impact factor: 2.742

5.  Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils.

Authors:  Hilary T C Leung; Kendra R Maas; Roland C Wilhelm; William W Mohn
Journal:  ISME J       Date:  2015-08-14       Impact factor: 10.302

6.  The alkyl tert-butyl ether intermediate 2-hydroxyisobutyrate is degraded via a novel cobalamin-dependent mutase pathway.

Authors:  Thore Rohwerder; Uta Breuer; Dirk Benndorf; Ute Lechner; Roland H Müller
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

7.  Carbon conversion efficiency and limits of productive bacterial degradation of methyl tert-butyl ether and related compounds.

Authors:  Roland H Müller; Thore Rohwerder; Hauke Harms
Journal:  Appl Environ Microbiol       Date:  2007-01-12       Impact factor: 4.792

8.  Microbial expression profiles in the rhizosphere of willows depend on soil contamination.

Authors:  Etienne Yergeau; Sylvie Sanschagrin; Christine Maynard; Marc St-Arnaud; Charles W Greer
Journal:  ISME J       Date:  2013-09-26       Impact factor: 10.302

9.  Composition and variation of sediment bacterial and nirS-harboring bacterial communities at representative sites of the Bohai Gulf coastal zone, China.

Authors:  Xiangyu Guan; Lingling Zhu; Youxun Li; Yuxuan Xie; Mingzhang Zhao; Ximing Luo
Journal:  World J Microbiol Biotechnol       Date:  2013-11-09       Impact factor: 3.312

Review 10.  The expanding world of methylotrophic metabolism.

Authors:  Ludmila Chistoserdova; Marina G Kalyuzhnaya; Mary E Lidstrom
Journal:  Annu Rev Microbiol       Date:  2009       Impact factor: 15.500

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