Literature DB >> 24201109

The autophagosome: origins unknown, biogenesis complex.

Christopher A Lamb, Tamotsu Yoshimori, Sharon A Tooze.   

Abstract

Healthy cells use autophagy as a general 'housekeeping' mechanism and to survive stress, including stress induced by nutrient deprivation. Autophagy is initiated at the isolation membrane (originally termed the phagophore), and the coordinated action of ATG (autophagy-related) proteins results in the expansion of this membrane to form the autophagosome. Although the biogenesis of the isolation membrane and the autophagosome is complex and incompletely understood, insight has been gained into the molecular processes involved in initiating the isolation membrane, the source from which this originates (for example, it was recently proposed that the isolation membrane forms from the mitochondria-associated endoplasmic reticulum (ER) membrane (MAM)) and the role of ATG proteins and the vesicular trafficking machinery in autophagosome formation.

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Year:  2013        PMID: 24201109     DOI: 10.1038/nrm3696

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  150 in total

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Review 2.  Regulation of TOR by small GTPases.

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Review 3.  SNAREs--engines for membrane fusion.

Authors:  Reinhard Jahn; Richard H Scheller
Journal:  Nat Rev Mol Cell Biol       Date:  2006-08-16       Impact factor: 94.444

Review 4.  Chaperone-mediated autophagy: molecular mechanisms and physiological relevance.

Authors:  Samantha J Orenstein; Ana Maria Cuervo
Journal:  Semin Cell Dev Biol       Date:  2010-02-20       Impact factor: 7.727

5.  Autophagosomes form at ER-mitochondria contact sites.

Authors:  Maho Hamasaki; Nobumichi Furuta; Atsushi Matsuda; Akiko Nezu; Akitsugu Yamamoto; Naonobu Fujita; Hiroko Oomori; Takeshi Noda; Tokuko Haraguchi; Yasushi Hiraoka; Atsuo Amano; Tamotsu Yoshimori
Journal:  Nature       Date:  2013-03-03       Impact factor: 49.962

6.  Modulation of local PtdIns3P levels by the PI phosphatase MTMR3 regulates constitutive autophagy.

Authors:  Naoko Taguchi-Atarashi; Maho Hamasaki; Kohichi Matsunaga; Hiroko Omori; Nicholas T Ktistakis; Tamotsu Yoshimori; Takeshi Noda
Journal:  Traffic       Date:  2010-01-06       Impact factor: 6.215

7.  Architecture of the Atg17 complex as a scaffold for autophagosome biogenesis.

Authors:  Michael J Ragusa; Robin E Stanley; James H Hurley
Journal:  Cell       Date:  2012-12-06       Impact factor: 41.582

8.  A HORMA domain in Atg13 mediates PI 3-kinase recruitment in autophagy.

Authors:  Christine C Jao; Michael J Ragusa; Robin E Stanley; James H Hurley
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-18       Impact factor: 11.205

9.  ER exit sites are physical and functional core autophagosome biogenesis components.

Authors:  Martin Graef; Jonathan R Friedman; Christopher Graham; Mohan Babu; Jodi Nunnari
Journal:  Mol Biol Cell       Date:  2013-07-31       Impact factor: 4.138

10.  Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice.

Authors:  Masaaki Komatsu; Satoshi Waguri; Takashi Ueno; Junichi Iwata; Shigeo Murata; Isei Tanida; Junji Ezaki; Noboru Mizushima; Yoshinori Ohsumi; Yasuo Uchiyama; Eiki Kominami; Keiji Tanaka; Tomoki Chiba
Journal:  J Cell Biol       Date:  2005-05-02       Impact factor: 10.539

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  524 in total

Review 1.  Autophagy and checkpoints for intracellular pathogen defense.

Authors:  Geraldine L C Paulus; Ramnik J Xavier
Journal:  Curr Opin Gastroenterol       Date:  2015-01       Impact factor: 3.287

Review 2.  Autophagy inhibitors.

Authors:  Benoit Pasquier
Journal:  Cell Mol Life Sci       Date:  2015-12-11       Impact factor: 9.261

Review 3.  Autophagy in endometriosis.

Authors:  Hui-Li Yang; Jie Mei; Kai-Kai Chang; Wen-Jie Zhou; Li-Qing Huang; Ming-Qing Li
Journal:  Am J Transl Res       Date:  2017-11-15       Impact factor: 4.060

4.  The insufficiency of ATG4A in macroautophagy.

Authors:  Nathan Nguyen; Taryn J Olivas; Antonio Mires; Jiaxin Jin; Shenliang Yu; Lin Luan; Shanta Nag; Karlina J Kauffman; Thomas J Melia
Journal:  J Biol Chem       Date:  2020-07-30       Impact factor: 5.157

Review 5.  Rabs and GAPs in starvation-induced autophagy.

Authors:  Christopher A Lamb; Andrea Longatti; Sharon A Tooze
Journal:  Small GTPases       Date:  2016-09-26

6.  Unsaturated fatty acid-induced non-canonical autophagy: unusual? Or unappreciated?

Authors:  Vytas A Bankaitis
Journal:  EMBO J       Date:  2015-03-11       Impact factor: 11.598

7.  Selective autophagy: xenophagy.

Authors:  Kyle A Bauckman; Nana Owusu-Boaitey; Indira U Mysorekar
Journal:  Methods       Date:  2014-12-11       Impact factor: 3.608

Review 8.  An evolutionary balance: conservation vs innovation in ciliate membrane trafficking.

Authors:  Sabrice Guerrier; Helmut Plattner; Elisabeth Richardson; Joel B Dacks; Aaron P Turkewitz
Journal:  Traffic       Date:  2016-10-27       Impact factor: 6.215

Review 9.  The Role of Autophagy in the Maintenance of Stemness and Differentiation of Mesenchymal Stem Cells.

Authors:  Francesca Vittoria Sbrana; Margherita Cortini; Sofia Avnet; Francesca Perut; Marta Columbaro; Angelo De Milito; Nicola Baldini
Journal:  Stem Cell Rev Rep       Date:  2016-12       Impact factor: 5.739

10.  The ICP0 Protein of Herpes Simplex Virus 1 (HSV-1) Downregulates Major Autophagy Adaptor Proteins Sequestosome 1 and Optineurin during the Early Stages of HSV-1 Infection.

Authors:  Hope Waisner; Maria Kalamvoki
Journal:  J Virol       Date:  2019-10-15       Impact factor: 5.103

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