Literature DB >> 24198478

Materiomics: biological protein materials, from nano to macro.

Steven Cranford1, Markus J Buehler.   

Abstract

Materiomics is an emerging field of science that provides a basis for multiscale material system characterization, inspired in part by natural, for example, protein-based materials. Here we outline the scope and explain the motivation of the field of materiomics, as well as demonstrate the benefits of a materiomic approach in the understanding of biological and natural materials as well as in the design of de novo materials. We discuss recent studies that exemplify the impact of materiomics - discovering Nature's complexity through a materials science approach that merges concepts of material and structure throughout all scales and incorporates feedback loops that facilitate sensing and resulting structural changes at multiple scales. The development and application of materiomics is illustrated for the specific case of protein-based materials, which constitute the building blocks of a variety of biological systems such as tendon, bone, skin, spider silk, cells, and tissue, as well as natural composite material systems (a combination of protein-based and inorganic constituents) such as nacre and mollusk shells, and other natural multiscale systems such as cellulose-based plant and wood materials. An important trait of these materials is that they display distinctive hierarchical structures across multiple scales, where molecular details are exhibited in macroscale mechanical responses. Protein materials are intriguing examples of materials that balance multiple tasks, representing some of the most sustainable material solutions that integrate structure and function despite severe limitations in the quality and quantity of material building blocks. However, up until now, our attempts to analyze and replicate Nature's materials have been hindered by our lack of fundamental understanding of these materials' intricate hierarchical structures, scale-bridging mechanisms, and complex material components that bestow protein-based materials their unique properties. Recent advances in analytical tools and experimental methods allow a holistic view of such a hierarchical biological material system. The integration of these approaches and amalgamation of material properties at all scale levels to develop a complete description of a material system falls within the emerging field of materiomics. Materiomics is the result of the convergence of engineering and materials science with experimental and computational biology in the context of natural and synthetic materials. Through materiomics, fundamental advances in our understanding of structure-property-process relations of biological systems contribute to the mechanistic understanding of certain diseases and facilitate the development of novel biological, biologically inspired, and completely synthetic materials for applications in medicine (biomaterials), nanotechnology, and engineering.

Entities:  

Keywords:  biological materials; deformation; diversity; failure; functional material properties; hierarchies; materiomics; multiscale; peptide; protein; universality

Year:  2010        PMID: 24198478      PMCID: PMC3781696          DOI: 10.2147/NSA.S9037

Source DB:  PubMed          Journal:  Nanotechnol Sci Appl        ISSN: 1177-8903


  72 in total

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Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

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Journal:  Science       Date:  2005-12-09       Impact factor: 47.728

3.  Nanogranular origins of the strength of bone.

Authors:  Kuangshin Tai; Franz-Josef Ulm; Christine Ortiz
Journal:  Nano Lett       Date:  2006-11       Impact factor: 11.189

Review 4.  An overview of structural DNA nanotechnology.

Authors:  Nadrian C Seeman
Journal:  Mol Biotechnol       Date:  2007-07-12       Impact factor: 2.695

5.  Genomics made easier: an introductory tutorial to genome datamining.

Authors:  Peter Schattner
Journal:  Genomics       Date:  2008-12-05       Impact factor: 5.736

6.  Young's moduli and shear moduli in cortical bone.

Authors:  H C Spatz; E J O'Leary; J F Vincent
Journal:  Proc Biol Sci       Date:  1996-03-22       Impact factor: 5.349

7.  Mechanical strength of abalone nacre: role of the soft organic layer.

Authors:  Marc André Meyers; Albert Yu-Min Lin; Po-Yu Chen; Julie Muyco
Journal:  J Mech Behav Biomed Mater       Date:  2007-05-29

8.  Role of intermolecular forces in defining material properties of protein nanofibrils.

Authors:  Tuomas P Knowles; Anthony W Fitzpatrick; Sarah Meehan; Helen R Mott; Michele Vendruscolo; Christopher M Dobson; Mark E Welland
Journal:  Science       Date:  2007-12-21       Impact factor: 47.728

Review 9.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

10.  Nanomechanical analysis of cells from cancer patients.

Authors:  Sarah E Cross; Yu-Sheng Jin; Jianyu Rao; James K Gimzewski
Journal:  Nat Nanotechnol       Date:  2007-12-02       Impact factor: 39.213

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  6 in total

1.  Materiomics for Oral Disease Diagnostics and Personal Health Monitoring: Designer Biomaterials for the Next Generation Biomarkers.

Authors:  Wenjun Zhang; Ming L Wang; Sammy Khalili; Steven W Cranford
Journal:  OMICS       Date:  2016-01

2.  Silk-Its Mysteries, How It Is Made, and How It Is Used.

Authors:  Davoud Ebrahimi; Olena Tokareva; Nae Gyune Rim; Joyce Y Wong; David L Kaplan; Markus J Buehler
Journal:  ACS Biomater Sci Eng       Date:  2015-08-24

Review 3.  Microbial interactions and community assembly at microscales.

Authors:  Otto X Cordero; Manoshi S Datta
Journal:  Curr Opin Microbiol       Date:  2016-05-25       Impact factor: 7.934

4.  Force generation by the growth of amyloid aggregates.

Authors:  Therese W Herling; Gonzalo A Garcia; Thomas C T Michaels; Wolfgang Grentz; James Dean; Ulyana Shimanovich; Hongze Gang; Thomas Müller; Batuhan Kav; Eugene M Terentjev; Christopher M Dobson; Tuomas P J Knowles
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

5.  Matriarch: A Python Library for Materials Architecture.

Authors:  Tristan Giesa; Ravi Jagadeesan; David I Spivak; Markus J Buehler
Journal:  ACS Biomater Sci Eng       Date:  2015-08-11

6.  Category theoretic analysis of hierarchical protein materials and social networks.

Authors:  David I Spivak; Tristan Giesa; Elizabeth Wood; Markus J Buehler
Journal:  PLoS One       Date:  2011-09-08       Impact factor: 3.240

  6 in total

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