Literature DB >> 24183573

Phosphorylation drives a dynamic switch in serine/arginine-rich proteins.

Shengqi Xiang1, Vytautas Gapsys, Hai-Young Kim, Sergey Bessonov, He-Hsuan Hsiao, Sina Möhlmann, Volker Klaukien, Ralf Ficner, Stefan Becker, Henning Urlaub, Reinhard Lührmann, Bert de Groot, Markus Zweckstetter.   

Abstract

Serine/arginine-rich (SR) proteins are important players in RNA metabolism and are extensively phosphorylated at serine residues in RS repeats. Here, we show that phosphorylation switches the RS domain of the serine/arginine-rich splicing factor 1 from a fully disordered state to a partially rigidified arch-like structure. Nuclear magnetic resonance spectroscopy in combination with molecular dynamics simulations revealed that the conformational switch is restricted to RS repeats, critically depends on the phosphate charge state and strongly decreases the conformational entropy of RS domains. The dynamic switch also occurs in the 100 kDa SR-related protein hPrp28, for which phosphorylation at the RS repeat is required for spliceosome assembly. Thus, a phosphorylation-induced dynamic switch is common to the class of serine/arginine-rich proteins and provides a molecular basis for the functional redundancy of serine/arginine-rich proteins and the profound influence of RS domain phosphorylation on protein-protein and protein-RNA interactions.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24183573     DOI: 10.1016/j.str.2013.09.014

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  45 in total

1.  Improved validation of IDP ensembles by one-bond Cα-Hα scalar couplings.

Authors:  Vytautas Gapsys; Raghavendran L Narayanan; ShengQi Xiang; Bert L de Groot; Markus Zweckstetter
Journal:  J Biomol NMR       Date:  2015-10-03       Impact factor: 2.835

2.  Effects of phosphorylation on the intrinsic propensity of backbone conformations of serine/threonine.

Authors:  Erbin He; Guanghui Yan; Jian Zhang; Jun Wang; Wenfei Li
Journal:  J Biol Phys       Date:  2016-01-12       Impact factor: 1.365

Review 3.  The RNAissance family: SR proteins as multifaceted regulators of gene expression.

Authors:  Jonathan M Howard; Jeremy R Sanford
Journal:  Wiley Interdiscip Rev RNA       Date:  2014-08-22       Impact factor: 9.957

4.  HyRes: a coarse-grained model for multi-scale enhanced sampling of disordered protein conformations.

Authors:  Xiaorong Liu; Jianhan Chen
Journal:  Phys Chem Chem Phys       Date:  2017-12-13       Impact factor: 3.676

Review 5.  Novel regulatory principles of the spliceosomal Brr2 RNA helicase and links to retinal disease in humans.

Authors:  Sina Mozaffari-Jovin; Traudy Wandersleben; Karine F Santos; Cindy L Will; Reinhard Lührmann; Markus C Wahl
Journal:  RNA Biol       Date:  2014-03-05       Impact factor: 4.652

6.  Structural analysis of the spliceosomal RNA helicase Prp28 from the thermophilic eukaryote Chaetomium thermophilum.

Authors:  Marcel J Tauchert; Ralf Ficner
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-04-22       Impact factor: 1.056

7.  Remodeling of the conformational ensemble of the repeat domain of tau by an aggregation enhancer.

Authors:  Elias Akoury; Marco D Mukrasch; Jacek Biernat; Katharina Tepper; Valery Ozenne; Eckhard Mandelkow; Martin Blackledge; Markus Zweckstetter
Journal:  Protein Sci       Date:  2016-03-24       Impact factor: 6.725

8.  N-terminus of the protein kinase CLK1 induces SR protein hyperphosphorylation.

Authors:  Brandon E Aubol; Ryan M Plocinik; Malik M Keshwani; Maria L McGlone; Jonathan C Hagopian; Gourisankar Ghosh; Xiang-Dong Fu; Joseph A Adams
Journal:  Biochem J       Date:  2014-08-15       Impact factor: 3.857

Review 9.  Electrostatic Interactions in Protein Structure, Folding, Binding, and Condensation.

Authors:  Huan-Xiang Zhou; Xiaodong Pang
Journal:  Chem Rev       Date:  2018-01-10       Impact factor: 60.622

10.  Directional Phosphorylation and Nuclear Transport of the Splicing Factor SRSF1 Is Regulated by an RNA Recognition Motif.

Authors:  Pedro Serrano; Brandon E Aubol; Malik M Keshwani; Stefano Forli; Chen-Ting Ma; Samit K Dutta; Michael Geralt; Kurt Wüthrich; Joseph A Adams
Journal:  J Mol Biol       Date:  2016-04-15       Impact factor: 5.469

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