Literature DB >> 24173928

Identification of genomic regions affecting plant height in sorghum and maize.

M G Pereira1, M Lee.   

Abstract

The objective of this study was to use restriction fragment length polymorphisms (RFLPs) to determine the genetic location and effects of genomic regions controlling plant height in sorghum. F2 plants (152) from the cross CK60 x PI229828 were used. Genomic and cDNA clones (106) identified 111 loci distributed among ten linkage groups covering 1299 cM. Interval mapping identified four regions, each in a separate linkage group. These regions may correspond to loci (dw) previously identified by alleles with qualitative effects. Also, these regions identified in sorghum may be orthologous to those previously reported for plant height in maize. Gene effects and gene action varied among genomic regions. In each region, PI229828 alleles resulted in increased plant height. Each region accounted for 9.2-28.7% of the phenotypic variation. Positive, additive effects ranged from 15 to 32cm. Tallness was dominant or overdominant and conferred by alleles from PI229828 for three quantitative trait loci (QTL). At the fourth QTL, PI229828 contributed to increased plant height, but short stature was partially dominant. One digenic interaction was significant. The presence of a PI229828 allele at one region diminished the effects of the other region. A multiple model indicated that these four regions collectively accounted for 63.4% of the total phenotypic variation. The utility of this information for germplasm conversion through backcross breeding is discussed.

Entities:  

Year:  1995        PMID: 24173928     DOI: 10.1007/BF00221980

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  21 in total

1.  Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers.

Authors:  C W Stuber; S E Lincoln; D W Wolff; T Helentjaris; E S Lander
Journal:  Genetics       Date:  1992-11       Impact factor: 4.562

2.  Conservation of gene repertoire but not gene order in pepper and tomato.

Authors:  S D Tanksley; R Bernatzky; N L Lapitan; J P Prince
Journal:  Proc Natl Acad Sci U S A       Date:  1988-09       Impact factor: 11.205

3.  Molecular-marker-facilitated investigations of quantitative trait loci in maize : 4. Analysis based on genome saturation with isozyme and restriction fragment length polymorphism markers.

Authors:  M D Edwards; T Helentjaris; S Wright; C W Stuber
Journal:  Theor Appl Genet       Date:  1992-04       Impact factor: 5.699

4.  Genetic mapping and characterization of sorghum and related crops by means of maize DNA probes.

Authors:  S H Hulbert; T E Richter; J D Axtell; J L Bennetzen
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

5.  Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.

Authors:  E S Lander; D Botstein
Journal:  Genetics       Date:  1989-01       Impact factor: 4.562

6.  Mendelian factors underlying quantitative traits in tomato: comparison across species, generations, and environments.

Authors:  A H Paterson; S Damon; J D Hewitt; D Zamir; H D Rabinowitch; S E Lincoln; E S Lander; S D Tanksley
Journal:  Genetics       Date:  1991-01       Impact factor: 4.562

7.  Comparative linkage maps of the rice and maize genomes.

Authors:  S Ahn; S D Tanksley
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

8.  Inheritance of the morphological differences between maize and teosinte: comparison of results for two F2 populations.

Authors:  J Doebley; A Stec
Journal:  Genetics       Date:  1993-06       Impact factor: 4.562

9.  Comparative genome mapping of Sorghum and maize.

Authors:  R Whitkus; J Doebley; M Lee
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

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  31 in total

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Authors:  Catherine Feuillet; Beat Keller
Journal:  Ann Bot       Date:  2002-01       Impact factor: 4.357

2.  Identification of quantitative trait loci for agronomically important traits and their association with genic-microsatellite markers in sorghum.

Authors:  G Srinivas; K Satish; R Madhusudhana; R Nagaraja Reddy; S Murali Mohan; N Seetharama
Journal:  Theor Appl Genet       Date:  2009-03-10       Impact factor: 5.699

3.  Comparative mapping in F2∶3 and F 6∶7 generations of quantitative trait loci for grain yield and yield components in maize.

Authors:  D F Austin; M Lee
Journal:  Theor Appl Genet       Date:  1996-05       Impact factor: 5.699

4.  Efficient mapping of plant height quantitative trait loci in a sorghum association population with introgressed dwarfing genes.

Authors:  Patrick J Brown; William L Rooney; Cleve Franks; Stephen Kresovich
Journal:  Genetics       Date:  2008-08-30       Impact factor: 4.562

5.  Exploiting rice-sorghum synteny for targeted development of EST-SSRs to enrich the sorghum genetic linkage map.

Authors:  P Ramu; B Kassahun; S Senthilvel; C Ashok Kumar; B Jayashree; R T Folkertsma; L Ananda Reddy; M S Kuruvinashetti; B I G Haussmann; C T Hash
Journal:  Theor Appl Genet       Date:  2009-08-08       Impact factor: 5.699

6.  Integrating sorghum whole genome sequence information with a compendium of sorghum QTL studies reveals uneven distribution of QTL and of gene-rich regions with significant implications for crop improvement.

Authors:  E S Mace; D R Jordan
Journal:  Theor Appl Genet       Date:  2011-04-12       Impact factor: 5.699

7.  Comparative genetics in the grasses.

Authors:  M D Gale; K M Devos
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-03       Impact factor: 11.205

8.  Molecular mapping of genomic regions harbouring QTLs for root and yield traits in sorghum (Sorghum bicolor L. Moench).

Authors:  B Fakrudin; S P Kavil; Y Girma; S S Arun; D Dadakhalandar; B H Gurusiddesh; A M Patil; M Thudi; S B Bhairappanavar; Y D Narayana; P U Krishnaraj; B M Khadi; M Y Kamatar
Journal:  Physiol Mol Biol Plants       Date:  2013-07

9.  Lineage-specific mapping of quantitative trait loci.

Authors:  C Chen; K Ritland
Journal:  Heredity (Edinb)       Date:  2013-04-24       Impact factor: 3.821

10.  Genetic mapping of QTLs affecting productivity and plant architecture in a full-sib cross from non-inbred parents in Cassava (Manihot esculenta Crantz).

Authors:  E Okogbenin; M Fregene
Journal:  Theor Appl Genet       Date:  2003-08-09       Impact factor: 5.699

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