Literature DB >> 24156062

Multi-penalty conditional random field approach to super-resolved reconstruction of optical coherence tomography images.

Ameneh Boroomand1, Alexander Wong, Edward Li, Daniel S Cho, Betty Ni, Kostandinka Bizheva.   

Abstract

Improving the spatial resolution of Optical Coherence Tomography (OCT) images is important for the visualization and analysis of small morphological features in biological tissue such as blood vessels, membranes, cellular layers, etc. In this paper, we propose a novel reconstruction approach to obtaining super-resolved OCT tomograms from multiple lower resolution images. The proposed Multi-Penalty Conditional Random Field (MPCRF) method combines four different penalty factors (spatial proximity, first and second order intensity variations, as well as a spline-based smoothness of fit) into the prior model within a Maximum A Posteriori (MAP) estimation framework. Test carried out in retinal OCT images illustrate the effectiveness of the proposed MPCRF reconstruction approach in terms of spatial resolution enhancement, as compared to previously published super resolved image reconstruction methods. Visual assessment of the MPCRF results demonstrate the potential of this method in better preservation of fine details and structures of the imaged sample, as well as retaining the sharpness of biological tissue boundaries while reducing the effects of speckle noise inherent to OCT. Quantitative evaluation using imaging metrics such as Signal-to-Noise Ratio (SNR), Contrast to Noise Ratio (CNR), Equivalent Number of Looks (ENL), and Edge Preservation Parameter show significant visual quality improvement with the MPCRF approach. Therefore, the proposed MPCRF reconstruction approach is an effective tool for enhancing the spatial resolution of OCT images without the necessity for significant imaging hardware modifications.

Keywords:  (100.0100) Image processing; (110.4500) Optical coherence tomography; (330.6130) Spatial resolution

Year:  2013        PMID: 24156062      PMCID: PMC3799664          DOI: 10.1364/BOE.4.002032

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  31 in total

1.  Intra-retinal layer segmentation in optical coherence tomography using an active contour approach.

Authors:  Azadeh Yazdanpanah; Ghassan Hamarneh; Benjamin Smith; Marinko Sarunic
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2.  Motion artifact suppression in full-field optical coherence tomography.

Authors:  Delphine Sacchet; Michal Brzezinski; Julien Moreau; Patrick Georges; Arnaud Dubois
Journal:  Appl Opt       Date:  2010-03-20       Impact factor: 1.980

3.  General Bayesian estimation for speckle noise reduction in optical coherence tomography retinal imagery.

Authors:  Alexander Wong; Akshaya Mishra; Kostadinka Bizheva; David A Clausi
Journal:  Opt Express       Date:  2010-04-12       Impact factor: 3.894

4.  Kernel regression for image processing and reconstruction.

Authors:  Hiroyuki Takeda; Sina Farsiu; Peyman Milanfar
Journal:  IEEE Trans Image Process       Date:  2007-02       Impact factor: 10.856

5.  Efficient subpixel image registration algorithms.

Authors:  Manuel Guizar-Sicairos; Samuel T Thurman; James R Fienup
Journal:  Opt Lett       Date:  2008-01-15       Impact factor: 3.776

6.  Interval type-II fuzzy anisotropic diffusion algorithm for speckle noise reduction in optical coherence tomography images.

Authors:  Prabakar Puvanathasan; Kostadinka Bizheva
Journal:  Opt Express       Date:  2009-01-19       Impact factor: 3.894

7.  Speckle in optical coherence tomography.

Authors:  J M Schmitt; S H Xiang; K M Yung
Journal:  J Biomed Opt       Date:  1999-01       Impact factor: 3.170

8.  Optimal spectral reshaping for resolution improvement in optical coherence tomography.

Authors:  Jianmin Gong; Bo Liu; Young L Kim; Yang Liu; Xu Li; Vadim Backman
Journal:  Opt Express       Date:  2006-06-26       Impact factor: 3.894

9.  Aligning scan locations from consecutive spectral-domain optical coherence tomography examinations: a comparison among different strategies.

Authors:  Andrea Giani; Marco Pellegrini; Alessandro Invernizzi; Mario Cigada; Giovanni Staurenghi
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-11-13       Impact factor: 4.799

10.  Enhanced optical coherence tomography imaging by multiple scan averaging.

Authors:  B Sander; M Larsen; L Thrane; J L Hougaard; T M Jørgensen
Journal:  Br J Ophthalmol       Date:  2005-02       Impact factor: 4.638

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  5 in total

1.  Enhancement of morphological and vascular features in OCT images using a modified Bayesian residual transform.

Authors:  Bingyao Tan; Alexander Wong; Kostadinka Bizheva
Journal:  Biomed Opt Express       Date:  2018-04-27       Impact factor: 3.732

2.  Segmentation Based Sparse Reconstruction of Optical Coherence Tomography Images.

Authors:  Leyuan Fang; Shutao Li; David Cunefare; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2016-09-20       Impact factor: 10.048

Review 3.  Past, present and future role of retinal imaging in neurodegenerative disease.

Authors:  Amir H Kashani; Samuel Asanad; Jane W Chan; Maxwell B Singer; Jiong Zhang; Mona Sharifi; Maziyar M Khansari; Farzan Abdolahi; Yonggang Shi; Alessandro Biffi; Helena Chui; John M Ringman
Journal:  Prog Retin Eye Res       Date:  2021-01-15       Impact factor: 19.704

4.  Compensated Row-Column Ultrasound Imaging System Using Multilayered Edge Guided Stochastically Fully Connected Random Fields.

Authors:  Ibrahim Ben Daya; Albert I H Chen; Mohammad Javad Shafiee; Alexander Wong; John T W Yeow
Journal:  Sci Rep       Date:  2017-09-06       Impact factor: 4.379

5.  Compensated Row-Column Ultrasound Imaging System Using Fisher Tippett Multilayered Conditional Random Field Model.

Authors:  Ibrahim Ben Daya; Albert I H Chen; Mohammad Javad Shafiee; Alexander Wong; John T W Yeow
Journal:  PLoS One       Date:  2015-12-11       Impact factor: 3.240

  5 in total

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