Literature DB >> 24134052

Comparison of membrane insertion pathways of the apoptotic regulator Bcl-xL and the diphtheria toxin translocation domain.

Mauricio Vargas-Uribe1, Mykola V Rodnin, Alexey S Ladokhin.   

Abstract

The diphtheria toxin translocation domain (T-domain) and the apoptotic repressor Bcl-xL are membrane proteins that adopt their final topology by switching folds from a water-soluble to a membrane-inserted state. While the exact molecular mechanisms of this transition are not clearly understood in either case, the similarity in the structures of soluble states of the T-domain and Bcl-xL led to the suggestion that their membrane insertion pathways will be similar, as well. Previously, we have applied an array of spectroscopic methods to characterize the pH-triggered refolding and membrane insertion of the diphtheria toxin T-domain. Here, we use the same set of methods to describe the membrane insertion pathway of Bcl-xL, which allows us to make a direct comparison between both systems with respect to the thermodynamic stability in solution, pH-dependent membrane association, and transmembrane insertion. Thermal denaturation measured by circular dichroism indicates that, unlike the T-domain, Bcl-xL does not undergo a pH-dependent destabilization of the structure. Förster resonance energy transfer measurements demonstrate that Bcl-xL undergoes reversible membrane association modulated by the presence of anionic lipids, suggesting that formation of the membrane-competent form occurs close to the membrane interface. Membrane insertion of the main hydrophobic helical hairpin of Bcl-xL, α5-α6, was studied by site-selective attachment of environment-sensitive dye NBD. In contrast to the insertion of the corresponding TH8-TH9 hairpin into the T-domain, insertion of α5-α6 was found not to depend strongly on the presence of anionic lipids. Taken together, our results indicate that while Bcl-xL and the T-domain share structural similarities, their modes of conformational switching and membrane insertion pathways are distinctly different.

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Year:  2013        PMID: 24134052      PMCID: PMC3882133          DOI: 10.1021/bi400926k

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

1.  Translocation of the catalytic domain of diphtheria toxin across planar phospholipid bilayers by its own T domain.

Authors:  K J Oh; L Senzel; R J Collier; A Finkelstein
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Acid destabilization of the solution conformation of Bcl-xL does not drive its pH-dependent insertion into membranes.

Authors:  Guruvasuthevan R Thuduppathy; R Blake Hill
Journal:  Protein Sci       Date:  2005-12-29       Impact factor: 6.725

3.  Chaperoning of insertion of membrane proteins into lipid bilayers by hemifluorinated surfactants: application to diphtheria toxin.

Authors:  Sergiy S Palchevskyy; Yevgen O Posokhov; Blandine Olivier; Jean-Luc Popot; Bernard Pucci; Alexey S Ladokhin
Journal:  Biochemistry       Date:  2006-02-28       Impact factor: 3.162

4.  Cytosol-to-membrane redistribution of Bax and Bcl-X(L) during apoptosis.

Authors:  Y T Hsu; K G Wolter; R J Youle
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-15       Impact factor: 11.205

5.  Folding of diphtheria toxin T-domain in the presence of amphipols and fluorinated surfactants: Toward thermodynamic measurements of membrane protein folding.

Authors:  Alexander Kyrychenko; Mykola V Rodnin; Mauricio Vargas-Uribe; Shivaji K Sharma; Grégory Durand; Bernard Pucci; Jean-Luc Popot; Alexey S Ladokhin
Journal:  Biochim Biophys Acta       Date:  2011-09-17

6.  The number of subunits comprising the channel formed by the T domain of diphtheria toxin.

Authors:  M Gordon; A Finkelstein
Journal:  J Gen Physiol       Date:  2001-11       Impact factor: 4.086

7.  Evidence that membrane insertion of the cytosolic domain of Bcl-xL is governed by an electrostatic mechanism.

Authors:  Guruvasuthevan R Thuduppathy; Jeffrey W Craig; Victoria Kholodenko; Arne Schon; R Blake Hill
Journal:  J Mol Biol       Date:  2006-04-06       Impact factor: 5.469

8.  Membrane-insertion fragments of Bcl-xL, Bax, and Bid.

Authors:  Ana J García-Sáez; Ismael Mingarro; Enrique Pérez-Payá; Jesús Salgado
Journal:  Biochemistry       Date:  2004-08-31       Impact factor: 3.162

Review 9.  The role of mitochondria in apoptosis*.

Authors:  Chunxin Wang; Richard J Youle
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

10.  Bcl-XL inhibits membrane permeabilization by competing with Bax.

Authors:  Lieven P Billen; Candis L Kokoski; Jonathan F Lovell; Brian Leber; David W Andrews
Journal:  PLoS Biol       Date:  2008-06-10       Impact factor: 8.029

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  20 in total

1.  Type 3 Secretion Translocators Spontaneously Assemble a Hexadecameric Transmembrane Complex.

Authors:  Fabian B Romano; Yuzhou Tang; Kyle C Rossi; Kathryn R Monopoli; Jennifer L Ross; Alejandro P Heuck
Journal:  J Biol Chem       Date:  2016-01-19       Impact factor: 5.157

2.  An inducible amphipathic helix within the intrinsically disordered C terminus can participate in membrane curvature generation by peripherin-2/rds.

Authors:  Michelle L Milstein; Victoria A Kimler; Chiranjib Ghatak; Alexey S Ladokhin; Andrew F X Goldberg
Journal:  J Biol Chem       Date:  2017-03-21       Impact factor: 5.157

3.  The pH-Dependent Trigger in Diphtheria Toxin T Domain Comes with a Safety Latch.

Authors:  Mykola V Rodnin; Jing Li; Michael L Gross; Alexey S Ladokhin
Journal:  Biophys J       Date:  2016-11-01       Impact factor: 4.033

Review 4.  Cooperativity Principles in Self-Assembled Nanomedicine.

Authors:  Yang Li; Yiguang Wang; Gang Huang; Jinming Gao
Journal:  Chem Rev       Date:  2018-04-25       Impact factor: 60.622

5.  The Pseudomonas aeruginosa type III secretion translocator PopB assists the insertion of the PopD translocator into host cell membranes.

Authors:  Yuzhou Tang; Fabian B Romano; Mariana Breña; Alejandro P Heuck
Journal:  J Biol Chem       Date:  2018-04-23       Impact factor: 5.157

6.  Targeting acidity in diseased tissues: mechanism and applications of the membrane-inserting peptide, pHLIP.

Authors:  John C Deacon; Donald M Engelman; Francisco N Barrera
Journal:  Arch Biochem Biophys       Date:  2014-11-18       Impact factor: 4.013

7.  Lipid headgroups modulate membrane insertion of pHLIP peptide.

Authors:  Alexander Kyrychenko; Victor Vasquez-Montes; Martin B Ulmschneider; Alexey S Ladokhin
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

Review 8.  Kinetics of peptide folding in lipid membranes.

Authors:  Kwang-Im Oh; Kathryn B Smith-Dupont; Beatrice N Markiewicz; Feng Gai
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

9.  Membrane Association of the Diphtheria Toxin Translocation Domain Studied by Coarse-Grained Simulations and Experiment.

Authors:  Jose C Flores-Canales; Mauricio Vargas-Uribe; Alexey S Ladokhin; Maria Kurnikova
Journal:  J Membr Biol       Date:  2015-02-04       Impact factor: 1.843

10.  Thermodynamics of Membrane Insertion and Refolding of the Diphtheria Toxin T-Domain.

Authors:  Mauricio Vargas-Uribe; Mykola V Rodnin; Karin Öjemalm; Aurora Holgado; Alexander Kyrychenko; IngMarie Nilsson; Yevgen O Posokhov; George Makhatadze; Gunnar von Heijne; Alexey S Ladokhin
Journal:  J Membr Biol       Date:  2014-10-04       Impact factor: 1.843

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