Literature DB >> 25808575

Kinetics of peptide folding in lipid membranes.

Kwang-Im Oh1, Kathryn B Smith-Dupont2, Beatrice N Markiewicz1, Feng Gai1.   

Abstract

Despite our extensive understanding of water-soluble protein folding kinetics, much less is known about the folding dynamics and mechanisms of membrane proteins. However, recent studies have shown that for relatively simple systems, such as peptides that form a transmembrane α-helix, helical dimer, or helix-turn-helix, it is possible to assess the kinetics of several important steps, including peptide binding to the membrane from aqueous solution, peptide folding on the membrane surface, helix insertion into the membrane, and helix-helix association inside the membrane. Herein, we provide a brief review of these studies and also suggest new initiation and probing methods that could lead to improved temporal and structural resolution in future experiments.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  fluorescence spectroscopy; membrane; membrane peptide; protein folding; stopped-flow kinetics

Mesh:

Substances:

Year:  2015        PMID: 25808575      PMCID: PMC4516651          DOI: 10.1002/bip.22640

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  140 in total

1.  Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain.

Authors:  L E Fisher; D M Engelman; J N Sturgis
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Review 2.  Protein folding and misfolding.

Authors:  Christopher M Dobson
Journal:  Nature       Date:  2003-12-18       Impact factor: 49.962

3.  Influence of the lipid composition on the kinetics of concerted insertion and folding of melittin in bilayers.

Authors:  Iren Constantinescu; Michel Lafleur
Journal:  Biochim Biophys Acta       Date:  2004-11-17

4.  Picosecond dynamics of a membrane protein revealed by 2D IR.

Authors:  Prabuddha Mukherjee; Itamar Kass; Isaiah T Arkin; Isaiah Arkin; Martin T Zanni
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

5.  The binding mechanisms of intrinsically disordered proteins.

Authors:  Jakob Dogan; Stefano Gianni; Per Jemth
Journal:  Phys Chem Chem Phys       Date:  2013-12-06       Impact factor: 3.676

6.  Properties of membrane-incorporated WALP peptides that are anchored on only one end.

Authors:  Johanna M Rankenberg; Vitaly V Vostrikov; Denise V Greathouse; Christopher V Grant; Stanley J Opella; Roger E Koeppe
Journal:  Biochemistry       Date:  2012-12-03       Impact factor: 3.162

7.  Reorientation and dimerization of the membrane-bound antimicrobial peptide PGLa from microsecond all-atom MD simulations.

Authors:  Jakob P Ulmschneider; Jeremy C Smith; Martin B Ulmschneider; Anne S Ulrich; Erik Strandberg
Journal:  Biophys J       Date:  2012-08-08       Impact factor: 4.033

8.  Tidal surge in the M2 proton channel, sensed by 2D IR spectroscopy.

Authors:  Ayanjeet Ghosh; Jade Qiu; William F DeGrado; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

9.  Time-resolved EPR immersion depth studies of a transmembrane peptide incorporated into bicelles.

Authors:  Nisreen A Nusair; Daniel J Mayo; Tia D Dorozenski; Thomas B Cardon; Johnson J Inbaraj; Ethan S Karp; Justin P Newstadt; Stuart M Grosser; Gary A Lorigan
Journal:  Biochim Biophys Acta       Date:  2011-11-11

10.  Fast membrane association is a crucial factor in the peptide pep-1 translocation mechanism: a kinetic study followed by surface plasmon resonance.

Authors:  Sónia Troeira Henriques; Miguel A R B Castanho; Leonard Keith Pattenden; Marie-Isabel Aguilar
Journal:  Biopolymers       Date:  2010       Impact factor: 2.505

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  2 in total

1.  Site-Specific Peptide Probes Detect Buried Water in a Lipid Membrane.

Authors:  Jennifer C Flanagan; Carlos R Baiz
Journal:  Biophys J       Date:  2019-03-19       Impact factor: 4.033

2.  Submillisecond Dynamics of Mastoparan X Insertion into Lipid Membranes.

Authors:  Erin E Schuler; Sureshbabu Nagarajan; R Brian Dyer
Journal:  J Phys Chem Lett       Date:  2016-08-15       Impact factor: 6.475

  2 in total

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