| Literature DB >> 24121801 |
Eric M Bottos, Anthony C Woo, Peyman Zawar-Reza, Stephen B Pointing, Stephen C Cary.
Abstract
Bacteria are assumed to disperse widely via aerosolized transport due to their small size and resilience. The question of microbial endemicity in isolated populations is directly related to the level of airborne exogenous inputs, yet this has proven hard to identify. The ice-free terrestrial ecosystem of Antarctica, a geographically and climatically isolated continent, was used to interrogate microbial bio-aerosols in relation to the surrounding ecology and climate. High-throughput sequencing of bacterial ribosomal RNA (rRNA) genes was combined with analyses of climate patterns during an austral summer. In general terms, the aerosols were dominated by Firmicutes, whereas surrounding soils supported Actinobacteria-dominated communities. The most abundant taxa were also common to aerosols from other continents, suggesting that a distinct bio-aerosol community is widely dispersed. No evidence for significant marine input to bioaerosols was found at this maritime valley site, instead local influence was largely from nearby volcanic sources. Back trajectory analysis revealed transport of incoming regional air masses across the Antarctic Plateau, and this is envisaged as a strong selective force. It is postulated that local soil microbial dispersal occurs largely via stochastic mobilization of mineral soil particulates.Entities:
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Year: 2014 PMID: 24121801 PMCID: PMC3907674 DOI: 10.1007/s00248-013-0296-y
Source DB: PubMed Journal: Microb Ecol ISSN: 0095-3628 Impact factor: 4.552
Fig. 1Phylum level distributions of sequences observed in the Miers ridge (R) and Miers valley floor (V) bacterial aerosol libraries (this study), plus surrounding soils (S) [17]. Phylum assignments were made using the Classifier function of the Ribosomal Database Project (RDP) Release 10 [26] with a confidence threshold of 80 %
Taxonomic assignments of the most abundant OTUs0.03 observed in the Miers Floor and Miers Ridge bacterial aerosol libraries
| OTU | Miers Floor (%) | Miers Ridge (%) | RDP assignment | Confidence (%) |
|---|---|---|---|---|
| 9 | 15.7 | 15.1 | Xanthomonadaceaef | 100 |
| 159 | 24.6 | 6.7 |
| 100 |
| 166 | 7.3 | 11.3 | Paenibacillaceaef | 81–100 |
| 176 | 23.5 | 14.3 | Paenibacillaceaef | 87–100 |
| 238 | 8.2 | 24.4 | Bacillaceaef | 100 |
Assignments were made using the Classifier function of the Ribosomal Database Project (RDP) Release 10 [26] with a confidence threshold of 80 %
fSequences grouped to family
gSequences grouped to genus
Fig. 2Neighbour-joining tree illustrating the phylogenetic relationships of sequences from the five most abundant OTUs0.03 observed in the Miers Floor and Miers Ridge bacterial aerosol libraries. The tree is based on a Clustal W alignment of 16S rRNA gene sequences over 266 homologous positions. Bootstrap support is shown at each node as a percentage, based on 1,000 resampled datasets. The scale indicates the number of substitutions per nucleotide position
Fig. 3Hysplit [39] back trajectories showing the origin of air masses influencing the sample site over the sampling period (yellow highlight)