| Literature DB >> 24109399 |
Abstract
IN THE TITLE COMPOUND (SYSTEMATIC NAME: {[(phenyl-formamido)-carbon-yl]amino}-methane-thio-amide), C9H9N3O2S, both benzoyl and terminal thio-urea fragments adopt transoid conformations with respect to the central carbonyl O atom. The benzoyl and thio-biuret groups are almost coplanar, making a dihedral angle of 4.40 (8)°. The mol-ecular structure is stabilized by two intra-molecular N-H⋯O hydrogen bonds. In the crystal, N-H⋯O and N-H⋯S hydrogen bonds link the mol-ecules into a tape running along [101].Entities:
Year: 2013 PMID: 24109399 PMCID: PMC3793812 DOI: 10.1107/S1600536813019983
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H9N3O2S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 3132 reflections | |
| θ = 2.7–22.3° | |
| µ = 0.30 mm−1 | |
| α = 97.169 (2)° | |
| β = 94.992 (3)° | Block, yellow |
| γ = 101.390 (2)° | 0.2 × 0.15 × 0.07 mm |
| Bruker SMART CCD diffractometer | 1485 reflections with |
| Radiation source: fine-focus sealed tube | |
| φ and ω scans | θmax = 28.3°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 17356 measured reflections | |
| 2516 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2516 reflections | Δρmax = 0.16 e Å−3 |
| 152 parameters | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.0374 (3) | 0.8224 (2) | −0.12506 (14) | 0.0447 (4) | |
| C2 | 0.2488 (3) | 0.9206 (2) | −0.15393 (16) | 0.0597 (5) | |
| H2 | 0.3881 | 0.9477 | −0.1014 | 0.072* | |
| C3 | 0.2552 (4) | 0.9785 (3) | −0.25952 (19) | 0.0729 (6) | |
| H3 | 0.398 | 1.0453 | −0.2778 | 0.087* | |
| C4 | 0.0539 (4) | 0.9383 (3) | −0.33677 (18) | 0.0723 (6) | |
| H4 | 0.06 | 0.9763 | −0.4085 | 0.087* | |
| C5 | −0.1598 (4) | 0.8419 (3) | −0.31035 (18) | 0.0753 (6) | |
| H5 | −0.2979 | 0.8154 | −0.3636 | 0.09* | |
| C6 | −0.1672 (3) | 0.7846 (3) | −0.20373 (16) | 0.0615 (5) | |
| H6 | −0.3114 | 0.7203 | −0.1851 | 0.074* | |
| C7 | 0.0480 (3) | 0.7661 (2) | −0.00927 (14) | 0.0442 (4) | |
| O8 | 0.2338 (2) | 0.80629 (17) | 0.05733 (11) | 0.0633 (4) | |
| N9 | −0.1594 (2) | 0.66558 (19) | 0.02071 (12) | 0.0467 (4) | |
| H9 | −0.284 (3) | 0.634 (2) | −0.0281 (16) | 0.054 (5)* | |
| C10 | −0.1998 (3) | 0.6059 (2) | 0.12532 (14) | 0.0446 (4) | |
| O11 | −0.3996 (2) | 0.52249 (17) | 0.13780 (10) | 0.0603 (4) | |
| N12 | −0.0057 (2) | 0.64570 (19) | 0.20766 (11) | 0.0467 (4) | |
| H12 | 0.131 (4) | 0.707 (2) | 0.1906 (17) | 0.067 (6)* | |
| C13 | 0.0039 (3) | 0.6057 (2) | 0.31929 (13) | 0.0447 (4) | |
| S14 | 0.27039 (8) | 0.66392 (7) | 0.40142 (4) | 0.05930 (19) | |
| N15 | −0.1971 (3) | 0.5267 (3) | 0.35341 (15) | 0.0646 (5) | |
| H15A | −0.336 (4) | 0.507 (2) | 0.3052 (18) | 0.075 (6)* | |
| H15B | −0.199 (3) | 0.486 (2) | 0.4173 (18) | 0.066 (6)* |
| C1 | 0.0468 (9) | 0.0459 (10) | 0.0402 (9) | 0.0048 (8) | 0.0046 (7) | 0.0100 (8) |
| C2 | 0.0539 (10) | 0.0726 (13) | 0.0505 (11) | 0.0013 (9) | 0.0049 (8) | 0.0214 (10) |
| C3 | 0.0714 (13) | 0.0858 (16) | 0.0630 (14) | 0.0016 (12) | 0.0175 (11) | 0.0337 (12) |
| C4 | 0.0944 (16) | 0.0782 (15) | 0.0503 (12) | 0.0174 (13) | 0.0138 (12) | 0.0294 (11) |
| C5 | 0.0810 (15) | 0.0890 (16) | 0.0523 (12) | 0.0069 (13) | −0.0107 (11) | 0.0263 (11) |
| C6 | 0.0564 (11) | 0.0714 (13) | 0.0518 (12) | −0.0029 (9) | −0.0038 (9) | 0.0230 (10) |
| C7 | 0.0403 (9) | 0.0483 (10) | 0.0410 (9) | 0.0009 (7) | 0.0013 (7) | 0.0102 (8) |
| O8 | 0.0426 (6) | 0.0882 (10) | 0.0501 (7) | −0.0140 (6) | −0.0047 (6) | 0.0269 (7) |
| N9 | 0.0392 (7) | 0.0609 (10) | 0.0353 (8) | −0.0021 (7) | −0.0023 (6) | 0.0141 (7) |
| C10 | 0.0411 (9) | 0.0546 (11) | 0.0349 (9) | 0.0016 (8) | 0.0012 (7) | 0.0099 (8) |
| O11 | 0.0397 (6) | 0.0898 (10) | 0.0432 (7) | −0.0107 (6) | −0.0017 (5) | 0.0213 (6) |
| N12 | 0.0370 (7) | 0.0637 (10) | 0.0359 (8) | −0.0022 (7) | 0.0008 (6) | 0.0165 (7) |
| C13 | 0.0401 (8) | 0.0588 (11) | 0.0355 (9) | 0.0069 (8) | 0.0047 (7) | 0.0129 (8) |
| S14 | 0.0402 (2) | 0.0911 (4) | 0.0424 (3) | 0.0002 (2) | −0.00342 (18) | 0.0213 (2) |
| N15 | 0.0403 (8) | 0.1120 (15) | 0.0414 (9) | 0.0026 (9) | 0.0021 (7) | 0.0336 (10) |
| C1—C6 | 1.377 (2) | C7—O8 | 1.2181 (18) |
| C1—C2 | 1.383 (2) | C7—N9 | 1.378 (2) |
| C1—C7 | 1.483 (2) | N9—C10 | 1.391 (2) |
| C2—C3 | 1.376 (3) | N9—H9 | 0.843 (18) |
| C2—H2 | 0.93 | C10—O11 | 1.2205 (18) |
| C3—C4 | 1.353 (3) | C10—N12 | 1.3591 (19) |
| C3—H3 | 0.93 | N12—C13 | 1.387 (2) |
| C4—C5 | 1.377 (3) | N12—H12 | 0.882 (19) |
| C4—H4 | 0.93 | C13—N15 | 1.305 (2) |
| C5—C6 | 1.385 (3) | C13—S14 | 1.6679 (16) |
| C5—H5 | 0.93 | N15—H15A | 0.91 (2) |
| C6—H6 | 0.93 | N15—H15B | 0.85 (2) |
| C6—C1—C2 | 118.74 (16) | O8—C7—N9 | 120.79 (15) |
| C6—C1—C7 | 124.45 (15) | O8—C7—C1 | 121.33 (14) |
| C2—C1—C7 | 116.81 (15) | N9—C7—C1 | 117.87 (14) |
| C3—C2—C1 | 120.69 (18) | C7—N9—C10 | 128.80 (14) |
| C3—C2—H2 | 119.7 | C7—N9—H9 | 119.4 (12) |
| C1—C2—H2 | 119.7 | C10—N9—H9 | 111.8 (12) |
| C4—C3—C2 | 120.02 (18) | O11—C10—N12 | 124.46 (15) |
| C4—C3—H3 | 120 | O11—C10—N9 | 119.83 (14) |
| C2—C3—H3 | 120 | N12—C10—N9 | 115.71 (14) |
| C3—C4—C5 | 120.70 (19) | C10—N12—C13 | 127.81 (14) |
| C3—C4—H4 | 119.7 | C10—N12—H12 | 117.8 (13) |
| C5—C4—H4 | 119.7 | C13—N12—H12 | 114.4 (13) |
| C4—C5—C6 | 119.38 (19) | N15—C13—N12 | 117.68 (14) |
| C4—C5—H5 | 120.3 | N15—C13—S14 | 124.41 (13) |
| C6—C5—H5 | 120.3 | N12—C13—S14 | 117.91 (12) |
| C1—C6—C5 | 120.46 (18) | C13—N15—H15A | 118.8 (13) |
| C1—C6—H6 | 119.8 | C13—N15—H15B | 121.9 (13) |
| C5—C6—H6 | 119.8 | H15A—N15—H15B | 119.1 (18) |
| H··· | ||||
| N9—H9···O11i | 0.843 (18) | 2.172 (18) | 2.9891 (18) | 163.3 (16) |
| N12—H12···O8 | 0.882 (19) | 1.919 (19) | 2.6171 (17) | 135.0 (17) |
| N15—H15 | 0.91 (2) | 1.99 (2) | 2.684 (2) | 132.0 (17) |
| N15—H15 | 0.85 (2) | 2.58 (2) | 3.4295 (17) | 171.3 (17) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N9—H9⋯O11i | 0.843 (18) | 2.172 (18) | 2.9891 (18) | 163.3 (16) |
| N12—H12⋯O8 | 0.882 (19) | 1.919 (19) | 2.6171 (17) | 135.0 (17) |
| N15—H15 | 0.91 (2) | 1.99 (2) | 2.684 (2) | 132.0 (17) |
| N15—H15 | 0.85 (2) | 2.58 (2) | 3.4295 (17) | 171.3 (17) |
Symmetry codes: (i) ; (ii) .