| Literature DB >> 24098236 |
Shaaban K Mohamed1, Joel T Mague, Mehmet Akkurt, Alaa A Hassan, Mustafa R Albayati.
Abstract
In the title compound, C20H17N3O4S, all non-H atoms, except those of the phenyl ring, are approximately coplanar [maximum deviation = 0.2214 (1) Å], and the dihedral angle between their best plane and the benzene ring is 53.13 (1)°. A short intra-molecular O⋯S contact of 2.838 (1) Å is formed between the ester carbonyl O atom and the S atom of the thia-zolidine ring. In the crystal, mol-ecules associated via O-H⋯O, C-H⋯O and C-H⋯S hydrogen bonds form layers parallel to (010), with only C-H⋯O-type short contacts between the mol-ecules in adjacent layers.Entities:
Year: 2013 PMID: 24098236 PMCID: PMC3790417 DOI: 10.1107/S1600536813025270
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H17N3O4S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 8755 reflections |
| θ = 2.3–28.6° | |
| µ = 0.20 mm−1 | |
| β = 107.637 (1)° | Plate, clear yellow |
| 0.19 × 0.11 × 0.05 mm | |
| Bruker SMART APEX CCD diffractometer | 4582 independent reflections |
| Radiation source: fine-focus sealed tube | 3740 reflections with i > 2σ(i) |
| Graphite monochromator | |
| Detector resolution: 8.3660 pixels mm-1 | θmax = 28.7°, θmin = 2.0° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 16907 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| W = 1/[Σ2( | |
| (Δ/σ)max = 0.001 | |
| 4582 reflections | Δρmax = 0.34 e Å−3 |
| 259 parameters | Δρmin = −0.44 e Å−3 |
| 0 restraints |
| Experimental. The diffraction data were collected in three sets of 606 frames (0.3° width in ω) at φ = 0, 120 and 240°. A scan time of 40 sec/frame was used. |
| Geometry. Bond distances, angles |
| Refinement. Refinement on |
| S1 | 1.01222 (4) | 0.18869 (2) | 0.39033 (4) | 0.0203 (1) | |
| O1 | 1.40358 (11) | 0.26023 (5) | 0.52637 (11) | 0.0240 (3) | |
| O2 | 1.09079 (13) | 0.05575 (6) | 0.42140 (13) | 0.0347 (4) | |
| O3 | 1.32263 (14) | 0.02111 (6) | 0.52834 (14) | 0.0378 (4) | |
| O4 | 0.14035 (12) | 0.15348 (6) | 0.10230 (13) | 0.0285 (3) | |
| N1 | 1.16412 (13) | 0.29748 (6) | 0.43935 (12) | 0.0189 (3) | |
| N2 | 0.90771 (13) | 0.31123 (6) | 0.34670 (13) | 0.0222 (4) | |
| N3 | 0.77907 (13) | 0.27335 (6) | 0.30473 (13) | 0.0219 (4) | |
| C1 | 1.27118 (16) | 0.25046 (7) | 0.47990 (15) | 0.0190 (4) | |
| C2 | 1.20296 (16) | 0.18459 (7) | 0.45802 (14) | 0.0193 (4) | |
| C3 | 1.01955 (15) | 0.27395 (7) | 0.38850 (14) | 0.0190 (4) | |
| C4 | 1.28646 (17) | 0.13149 (7) | 0.49043 (16) | 0.0229 (4) | |
| C5 | 1.22088 (18) | 0.06672 (8) | 0.47422 (16) | 0.0260 (5) | |
| C6 | 1.2661 (3) | −0.04389 (9) | 0.5273 (3) | 0.0553 (8) | |
| C7 | 1.20015 (15) | 0.36539 (7) | 0.44261 (16) | 0.0206 (4) | |
| C8 | 1.29110 (17) | 0.39165 (8) | 0.56415 (17) | 0.0275 (5) | |
| C9 | 1.3342 (2) | 0.45594 (9) | 0.5655 (2) | 0.0368 (5) | |
| C10 | 1.2839 (2) | 0.49351 (8) | 0.4477 (2) | 0.0384 (6) | |
| C11 | 1.1899 (2) | 0.46687 (8) | 0.32791 (19) | 0.0347 (5) | |
| C12 | 1.14814 (18) | 0.40248 (8) | 0.32417 (16) | 0.0272 (5) | |
| C13 | 0.65717 (16) | 0.30559 (7) | 0.27572 (15) | 0.0196 (4) | |
| C14 | 0.64599 (17) | 0.37782 (8) | 0.28058 (17) | 0.0260 (5) | |
| C15 | 0.52047 (15) | 0.26621 (7) | 0.23315 (15) | 0.0187 (4) | |
| C16 | 0.52602 (16) | 0.19872 (7) | 0.23265 (17) | 0.0241 (4) | |
| C17 | 0.39928 (17) | 0.16202 (8) | 0.18891 (18) | 0.0267 (5) | |
| C18 | 0.26171 (16) | 0.19204 (7) | 0.14442 (15) | 0.0207 (4) | |
| C19 | 0.25339 (16) | 0.25898 (7) | 0.14520 (16) | 0.0227 (4) | |
| C20 | 0.38175 (16) | 0.29540 (7) | 0.18934 (16) | 0.0221 (4) | |
| H4 | 1.39070 | 0.13580 | 0.52480 | 0.0270* | |
| H4O | 0.066 (2) | 0.1774 (11) | 0.077 (2) | 0.046 (6)* | |
| H6A | 1.19470 | −0.04490 | 0.57960 | 0.0830* | |
| H6B | 1.34780 | −0.07350 | 0.56990 | 0.0830* | |
| H6C | 1.21740 | −0.05730 | 0.43150 | 0.0830* | |
| H8 | 1.32360 | 0.36600 | 0.64560 | 0.0330* | |
| H9 | 1.39860 | 0.47420 | 0.64770 | 0.0440* | |
| H10 | 1.31370 | 0.53750 | 0.44900 | 0.0460* | |
| H11 | 1.15380 | 0.49300 | 0.24760 | 0.0420* | |
| H12 | 1.08480 | 0.38410 | 0.24160 | 0.0330* | |
| H14A | 0.74530 | 0.39660 | 0.31100 | 0.0390* | |
| H14B | 0.59250 | 0.38990 | 0.34570 | 0.0390* | |
| H14C | 0.59280 | 0.39420 | 0.18820 | 0.0390* | |
| H16 | 0.61910 | 0.17760 | 0.26310 | 0.0290* | |
| H17 | 0.40570 | 0.11610 | 0.18910 | 0.0320* | |
| H19 | 0.16000 | 0.27990 | 0.11560 | 0.0270* | |
| H20 | 0.37500 | 0.34130 | 0.18970 | 0.0260* |
| S1 | 0.0149 (2) | 0.0209 (2) | 0.0233 (2) | −0.0034 (1) | 0.0030 (1) | −0.0019 (1) |
| O1 | 0.0134 (5) | 0.0242 (6) | 0.0308 (6) | −0.0009 (4) | 0.0011 (4) | 0.0019 (4) |
| O2 | 0.0316 (7) | 0.0275 (6) | 0.0427 (7) | −0.0071 (5) | 0.0078 (5) | −0.0030 (5) |
| O3 | 0.0387 (7) | 0.0198 (6) | 0.0525 (8) | 0.0051 (5) | 0.0104 (6) | 0.0035 (5) |
| O4 | 0.0159 (5) | 0.0239 (6) | 0.0441 (7) | −0.0016 (5) | 0.0067 (5) | −0.0074 (5) |
| N1 | 0.0131 (6) | 0.0191 (6) | 0.0222 (6) | −0.0025 (5) | 0.0017 (5) | −0.0002 (5) |
| N2 | 0.0141 (6) | 0.0247 (7) | 0.0252 (7) | −0.0007 (5) | 0.0022 (5) | −0.0009 (5) |
| N3 | 0.0137 (6) | 0.0252 (7) | 0.0250 (7) | −0.0005 (5) | 0.0030 (5) | 0.0008 (5) |
| C1 | 0.0158 (7) | 0.0215 (7) | 0.0187 (7) | −0.0012 (5) | 0.0036 (5) | 0.0005 (5) |
| C2 | 0.0180 (7) | 0.0220 (7) | 0.0172 (7) | −0.0034 (6) | 0.0043 (5) | −0.0011 (5) |
| C3 | 0.0147 (7) | 0.0220 (7) | 0.0186 (7) | −0.0026 (5) | 0.0025 (5) | −0.0012 (5) |
| C4 | 0.0193 (7) | 0.0236 (8) | 0.0242 (7) | 0.0000 (6) | 0.0044 (6) | −0.0009 (6) |
| C5 | 0.0294 (8) | 0.0222 (8) | 0.0273 (8) | 0.0005 (6) | 0.0101 (7) | −0.0014 (6) |
| C6 | 0.0658 (15) | 0.0195 (9) | 0.0817 (17) | 0.0013 (9) | 0.0238 (13) | 0.0051 (10) |
| C7 | 0.0153 (6) | 0.0181 (7) | 0.0273 (8) | −0.0001 (5) | 0.0050 (6) | −0.0002 (6) |
| C8 | 0.0230 (8) | 0.0242 (8) | 0.0296 (8) | 0.0001 (6) | −0.0005 (6) | 0.0014 (6) |
| C9 | 0.0334 (9) | 0.0251 (9) | 0.0423 (10) | −0.0044 (7) | −0.0031 (8) | −0.0061 (7) |
| C10 | 0.0401 (10) | 0.0182 (8) | 0.0524 (12) | −0.0038 (7) | 0.0071 (9) | 0.0001 (7) |
| C11 | 0.0408 (10) | 0.0246 (8) | 0.0354 (9) | 0.0018 (7) | 0.0066 (8) | 0.0074 (7) |
| C12 | 0.0283 (8) | 0.0242 (8) | 0.0251 (8) | −0.0008 (6) | 0.0023 (6) | −0.0004 (6) |
| C13 | 0.0157 (7) | 0.0239 (8) | 0.0185 (7) | 0.0017 (6) | 0.0041 (5) | 0.0016 (5) |
| C14 | 0.0198 (7) | 0.0224 (8) | 0.0344 (9) | 0.0006 (6) | 0.0060 (6) | −0.0006 (6) |
| C15 | 0.0143 (7) | 0.0228 (7) | 0.0190 (7) | 0.0009 (5) | 0.0051 (5) | 0.0017 (5) |
| C16 | 0.0151 (7) | 0.0232 (8) | 0.0334 (8) | 0.0042 (6) | 0.0065 (6) | 0.0029 (6) |
| C17 | 0.0206 (8) | 0.0191 (7) | 0.0409 (9) | 0.0027 (6) | 0.0099 (7) | −0.0003 (6) |
| C18 | 0.0162 (7) | 0.0234 (8) | 0.0230 (7) | −0.0013 (6) | 0.0069 (6) | −0.0028 (6) |
| C19 | 0.0147 (7) | 0.0249 (8) | 0.0270 (8) | 0.0044 (6) | 0.0041 (6) | 0.0003 (6) |
| C20 | 0.0171 (7) | 0.0195 (7) | 0.0289 (8) | 0.0032 (6) | 0.0059 (6) | 0.0015 (6) |
| S1—C2 | 1.7352 (16) | C13—C15 | 1.482 (2) |
| S1—C3 | 1.7628 (15) | C15—C20 | 1.394 (2) |
| O1—C1 | 1.2195 (19) | C15—C16 | 1.395 (2) |
| O2—C5 | 1.211 (2) | C16—C17 | 1.378 (2) |
| O3—C5 | 1.343 (2) | C17—C18 | 1.393 (2) |
| O3—C6 | 1.445 (2) | C18—C19 | 1.385 (2) |
| O4—C18 | 1.360 (2) | C19—C20 | 1.387 (2) |
| O4—H4O | 0.84 (2) | C4—H4 | 0.9500 |
| N1—C1 | 1.376 (2) | C6—H6A | 0.9800 |
| N1—C7 | 1.4420 (19) | C6—H6B | 0.9800 |
| N1—C3 | 1.4003 (19) | C6—H6C | 0.9800 |
| N2—N3 | 1.4046 (18) | C8—H8 | 0.9500 |
| N2—C3 | 1.2766 (19) | C9—H9 | 0.9500 |
| N3—C13 | 1.291 (2) | C10—H10 | 0.9500 |
| C1—C2 | 1.495 (2) | C11—H11 | 0.9500 |
| C2—C4 | 1.335 (2) | C12—H12 | 0.9500 |
| C4—C5 | 1.464 (2) | C14—H14A | 0.9800 |
| C7—C12 | 1.383 (2) | C14—H14B | 0.9800 |
| C7—C8 | 1.384 (2) | C14—H14C | 0.9800 |
| C8—C9 | 1.389 (3) | C16—H16 | 0.9500 |
| C9—C10 | 1.382 (3) | C17—H17 | 0.9500 |
| C10—C11 | 1.385 (3) | C19—H19 | 0.9500 |
| C11—C12 | 1.385 (2) | C20—H20 | 0.9500 |
| C13—C14 | 1.498 (2) | ||
| C2—S1—C3 | 90.75 (7) | O4—C18—C17 | 117.69 (13) |
| C5—O3—C6 | 115.39 (17) | O4—C18—C19 | 122.83 (14) |
| C18—O4—H4O | 107.9 (15) | C17—C18—C19 | 119.48 (14) |
| C1—N1—C3 | 114.79 (12) | C18—C19—C20 | 119.81 (14) |
| C3—N1—C7 | 123.08 (12) | C15—C20—C19 | 121.51 (13) |
| C1—N1—C7 | 122.05 (13) | C2—C4—H4 | 119.00 |
| N3—N2—C3 | 108.99 (12) | C5—C4—H4 | 119.00 |
| N2—N3—C13 | 114.87 (12) | O3—C6—H6A | 109.00 |
| O1—C1—C2 | 123.95 (14) | O3—C6—H6B | 109.00 |
| N1—C1—C2 | 110.48 (13) | O3—C6—H6C | 109.00 |
| O1—C1—N1 | 125.57 (14) | H6A—C6—H6B | 110.00 |
| S1—C2—C4 | 127.54 (12) | H6A—C6—H6C | 109.00 |
| C1—C2—C4 | 120.83 (14) | H6B—C6—H6C | 109.00 |
| S1—C2—C1 | 111.63 (11) | C7—C8—H8 | 120.00 |
| S1—C3—N2 | 125.07 (12) | C9—C8—H8 | 120.00 |
| N1—C3—N2 | 122.57 (13) | C8—C9—H9 | 120.00 |
| S1—C3—N1 | 112.36 (10) | C10—C9—H9 | 120.00 |
| C2—C4—C5 | 121.46 (15) | C9—C10—H10 | 120.00 |
| O2—C5—O3 | 124.20 (16) | C11—C10—H10 | 120.00 |
| O2—C5—C4 | 124.31 (15) | C10—C11—H11 | 120.00 |
| O3—C5—C4 | 111.46 (14) | C12—C11—H11 | 120.00 |
| N1—C7—C12 | 119.94 (14) | C7—C12—H12 | 121.00 |
| C8—C7—C12 | 121.22 (14) | C11—C12—H12 | 121.00 |
| N1—C7—C8 | 118.80 (13) | C13—C14—H14A | 109.00 |
| C7—C8—C9 | 119.12 (15) | C13—C14—H14B | 109.00 |
| C8—C9—C10 | 120.31 (17) | C13—C14—H14C | 109.00 |
| C9—C10—C11 | 119.78 (16) | H14A—C14—H14B | 110.00 |
| C10—C11—C12 | 120.59 (16) | H14A—C14—H14C | 109.00 |
| C7—C12—C11 | 118.95 (15) | H14B—C14—H14C | 109.00 |
| N3—C13—C15 | 115.50 (13) | C15—C16—H16 | 119.00 |
| C14—C13—C15 | 119.45 (13) | C17—C16—H16 | 119.00 |
| N3—C13—C14 | 125.05 (14) | C16—C17—H17 | 120.00 |
| C13—C15—C20 | 121.09 (13) | C18—C17—H17 | 120.00 |
| C16—C15—C20 | 117.65 (14) | C18—C19—H19 | 120.00 |
| C13—C15—C16 | 121.25 (14) | C20—C19—H19 | 120.00 |
| C15—C16—C17 | 121.37 (15) | C15—C20—H20 | 119.00 |
| C16—C17—C18 | 120.18 (15) | C19—C20—H20 | 119.00 |
| C3—S1—C2—C1 | 0.49 (11) | S1—C2—C4—C5 | −1.6 (2) |
| C3—S1—C2—C4 | 179.93 (14) | C1—C2—C4—C5 | 177.79 (14) |
| C2—S1—C3—N1 | −0.41 (11) | C2—C4—C5—O2 | 6.1 (3) |
| C2—S1—C3—N2 | 179.83 (13) | C2—C4—C5—O3 | −172.43 (14) |
| C6—O3—C5—O2 | −3.4 (3) | N1—C7—C8—C9 | 175.77 (15) |
| C6—O3—C5—C4 | 175.15 (17) | C12—C7—C8—C9 | −2.0 (3) |
| C3—N1—C1—O1 | 179.63 (14) | N1—C7—C12—C11 | −176.95 (15) |
| C3—N1—C1—C2 | 0.14 (17) | C8—C7—C12—C11 | 0.8 (3) |
| C7—N1—C1—O1 | 2.8 (2) | C7—C8—C9—C10 | 1.5 (3) |
| C7—N1—C1—C2 | −176.72 (12) | C8—C9—C10—C11 | 0.1 (3) |
| C1—N1—C3—S1 | 0.22 (15) | C9—C10—C11—C12 | −1.3 (3) |
| C1—N1—C3—N2 | 179.98 (14) | C10—C11—C12—C7 | 0.9 (3) |
| C7—N1—C3—S1 | 177.05 (11) | N3—C13—C15—C16 | 3.4 (2) |
| C7—N1—C3—N2 | −3.2 (2) | N3—C13—C15—C20 | −175.24 (14) |
| C1—N1—C7—C8 | −52.6 (2) | C14—C13—C15—C16 | −177.37 (14) |
| C1—N1—C7—C12 | 125.14 (16) | C14—C13—C15—C20 | 4.0 (2) |
| C3—N1—C7—C8 | 130.78 (15) | C13—C15—C16—C17 | −177.90 (15) |
| C3—N1—C7—C12 | −51.5 (2) | C20—C15—C16—C17 | 0.8 (2) |
| C3—N2—N3—C13 | 172.11 (13) | C13—C15—C20—C19 | 177.96 (14) |
| N3—N2—C3—S1 | 0.83 (17) | C16—C15—C20—C19 | −0.7 (2) |
| N3—N2—C3—N1 | −178.90 (12) | C15—C16—C17—C18 | −0.3 (3) |
| N2—N3—C13—C14 | 1.6 (2) | C16—C17—C18—O4 | 179.96 (15) |
| N2—N3—C13—C15 | −179.18 (12) | C16—C17—C18—C19 | −0.3 (2) |
| O1—C1—C2—S1 | −179.96 (13) | O4—C18—C19—C20 | −179.92 (14) |
| O1—C1—C2—C4 | 0.6 (2) | C17—C18—C19—C20 | 0.4 (2) |
| N1—C1—C2—S1 | −0.45 (15) | C18—C19—C20—C15 | 0.1 (2) |
| N1—C1—C2—C4 | −179.95 (15) |
| H··· | ||||
| O4—H4 | 0.84 (2) | 1.96 (2) | 2.7901 (16) | 174.8 (19) |
| C8—H8···S1ii | 0.95 | 2.82 | 3.7272 (17) | 160 |
| C10—H10···O4iii | 0.95 | 2.52 | 3.452 (2) | 167 |
| C14—H14 | 0.98 | 2.30 | 2.742 (2) | 106 |
| C19—H19···O1i | 0.95 | 2.47 | 3.200 (2) | 133 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O4—H4 | 0.84 (2) | 1.96 (2) | 2.7901 (16) | 174.8 (19) |
| C8—H8⋯S1ii | 0.95 | 2.82 | 3.7272 (17) | 160 |
| C10—H10⋯O4iii | 0.95 | 2.52 | 3.452 (2) | 167 |
| C19—H19⋯O1i | 0.95 | 2.47 | 3.200 (2) | 133 |
Symmetry codes: (i) ; (ii) ; (iii) .