Literature DB >> 24098172

Di-chlorido-diphenyl-bis-(thio-urea-κS)tin(IV).

Yaya Sow1, Libasse Diop, Kieran C Molloy, Gabriele Kociok-Köhn.   

Abstract

The title compound, [Sn(C6H5)2Cl2(CH4N2S)2], has been obtained from the reaction between Sn(C6H5)2Cl2 and SC(NH2)2. The asymmetric unit consists of one half of the mol-ecular unit, the remainder generated by a twofold rotation axis located along the Cl-Sn-Cl bonds. The Sn(IV) atom is coordinated by two phenyl groups, two Cl atoms and two thio-urea ligands in an all trans octa-hedral C2Cl2S2 environment. Individual mol-ecules are connected through N-H⋯Cl hydrogen bonds, leading to a three-dimensional network structure. Intra-molecular N-H⋯Cl hydrogen bonds are also present.

Entities:  

Year:  2013        PMID: 24098172      PMCID: PMC3790350          DOI: 10.1107/S1600536813024343

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to organotin(IV) chemistry, see: Kapoor et al. (2005 ▶); Sadiq-ur-Rehman et al. (2007) ▶; Zhang et al. (2006 ▶). For organotin(IV) compounds exhibiting biological activity, see: Nath et al. (2001 ▶); Pellerito & Nagy (2002 ▶). For chlorido­tin(IV) complexes, see: Amini et al. (2002 ▶); Müller et al. (2008 ▶). For tin(IV) complexes containing thio­urea groups, see: Donaldson et al. (1984 ▶); Sow et al. (2012 ▶); Wirth et al. (1998 ▶).

Experimental

Crystal data

[Sn(C6H5)2Cl2(CH4N2S)2] M = 496.03 Tetragonal, a = 14.6401 (2) Å c = 17.7899 (3) Å V = 3812.95 (10) Å3 Z = 8 Mo Kα radiation μ = 1.84 mm−1 T = 150 K 0.35 × 0.35 × 0.25 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SORTAV; Blessing, 1995 ▶) T min = 0.565, T max = 0.656 23870 measured reflections 2183 independent reflections 1892 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.019 wR(F 2) = 0.051 S = 1.06 2183 reflections 123 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.72 e Å−3 Data collection: COLLECT (Nonius, 1999 ▶); cell refinement: DENZO and SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO and SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536813024343/wm2764sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024343/wm2764Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Sn(C6H5)2Cl2(CH4N2S)2]Dx = 1.728 Mg m3
Mr = 496.03Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 13789 reflections
Hall symbol: -I 4adθ = 2.9–27.5°
a = 14.6401 (2) ŵ = 1.84 mm1
c = 17.7899 (3) ÅT = 150 K
V = 3812.95 (10) Å3Block, colourless
Z = 80.35 × 0.35 × 0.25 mm
F(000) = 1968
Nonius KappaCCD diffractometer2183 independent reflections
Radiation source: fine-focus sealed tube1892 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.041
152 2.0 degree images with ω scansθmax = 27.5°, θmin = 3.3°
Absorption correction: multi-scan (SORTAV; Blessing, 1995)h = −18→18
Tmin = 0.565, Tmax = 0.656k = −18→18
23870 measured reflectionsl = −23→23
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.019H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.051w = 1/[σ2(Fo2) + (0.0219P)2 + 4.1509P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2183 reflectionsΔρmax = 0.40 e Å3
123 parametersΔρmin = −0.72 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00076 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Sn0.00000.25000.371721 (7)0.01479 (8)
Cl10.00000.25000.22431 (3)0.01928 (13)
Cl20.00000.25000.51334 (3)0.02256 (13)
S0.15011 (3)0.35281 (3)0.35755 (3)0.02464 (11)
N10.22306 (14)0.26557 (13)0.47461 (10)0.0378 (4)
H1A0.2663 (18)0.2448 (17)0.4972 (14)0.054 (8)*
H1B0.1685 (19)0.2538 (17)0.4898 (14)0.052 (7)*
N20.32157 (12)0.32246 (17)0.38782 (12)0.0463 (5)
H2A0.3644 (18)0.3077 (18)0.4143 (15)0.056 (7)*
H2B0.331 (2)0.348 (2)0.3459 (19)0.076 (10)*
C10.07672 (12)0.12407 (11)0.36491 (8)0.0191 (3)
C20.15058 (11)0.11573 (11)0.31618 (9)0.0220 (3)
H20.17120.16750.28880.026*
C30.19442 (12)0.03197 (13)0.30729 (10)0.0287 (4)
H30.24480.02660.27390.034*
C40.16417 (13)−0.04356 (13)0.34738 (11)0.0325 (4)
H40.1930−0.10110.34060.039*
C50.09216 (13)−0.03516 (12)0.39710 (11)0.0303 (4)
H50.0724−0.08670.42520.036*
C60.04852 (11)0.04849 (11)0.40608 (9)0.0231 (3)
H6−0.00080.05400.44050.028*
C70.23733 (12)0.30925 (11)0.41088 (10)0.0247 (4)
U11U22U33U12U13U23
Sn0.01624 (10)0.01267 (10)0.01545 (10)−0.00079 (5)0.0000.000
Cl10.0222 (3)0.0212 (3)0.0144 (2)−0.00041 (19)0.0000.000
Cl20.0323 (3)0.0204 (3)0.0150 (3)−0.0046 (2)0.0000.000
S0.0184 (2)0.0218 (2)0.0337 (2)−0.00452 (16)−0.00682 (17)0.00877 (17)
N10.0324 (10)0.0431 (10)0.0380 (9)−0.0012 (8)−0.0151 (8)0.0110 (8)
N20.0187 (9)0.0828 (16)0.0373 (10)0.0101 (9)−0.0039 (8)0.0048 (10)
C10.0211 (8)0.0180 (8)0.0183 (7)−0.0031 (6)−0.0033 (6)−0.0004 (6)
C20.0198 (8)0.0217 (8)0.0246 (8)−0.0008 (6)0.0003 (6)0.0015 (6)
C30.0201 (9)0.0310 (10)0.0352 (10)0.0061 (7)0.0019 (7)−0.0032 (7)
C40.0295 (10)0.0244 (9)0.0437 (11)0.0092 (7)−0.0056 (8)0.0005 (8)
C50.0331 (10)0.0210 (9)0.0368 (9)0.0020 (7)−0.0030 (8)0.0084 (7)
C60.0246 (8)0.0216 (8)0.0231 (8)0.0003 (6)−0.0003 (6)0.0036 (6)
C70.0238 (8)0.0231 (8)0.0271 (9)0.0021 (6)−0.0058 (7)−0.0057 (7)
Sn—C12.1622 (17)N2—H2B0.85 (3)
Sn—C1i2.1622 (17)C1—C61.390 (2)
Sn—Cl22.5194 (6)C1—C21.391 (2)
Sn—Cl12.6224 (6)C2—C31.393 (2)
Sn—Si2.6755 (4)C2—H20.9500
Sn—S2.6755 (4)C3—C41.388 (3)
S—C71.7137 (17)C3—H30.9500
N1—C71.318 (2)C4—C51.382 (3)
N1—H1A0.81 (3)C4—H40.9500
N1—H1B0.86 (3)C5—C61.391 (2)
N2—C71.314 (2)C5—H50.9500
N2—H2A0.81 (3)C6—H60.9500
C1—Sn—C1i173.57 (8)C6—C1—C2119.30 (16)
C1—Sn—Cl293.21 (4)C6—C1—Sn119.67 (12)
C1i—Sn—Cl293.21 (4)C2—C1—Sn120.90 (12)
C1—Sn—Cl186.79 (4)C1—C2—C3120.40 (16)
C1i—Sn—Cl186.79 (4)C1—C2—H2119.8
Cl2—Sn—Cl1180.0C3—C2—H2119.8
C1—Sn—Si86.66 (4)C4—C3—C2119.72 (16)
C1i—Sn—Si92.73 (4)C4—C3—H3120.1
Cl2—Sn—Si95.405 (10)C2—C3—H3120.1
Cl1—Sn—Si84.595 (10)C5—C4—C3120.09 (17)
C1—Sn—S92.73 (4)C5—C4—H4120.0
C1i—Sn—S86.66 (4)C3—C4—H4120.0
Cl2—Sn—S95.405 (10)C4—C5—C6120.17 (16)
Cl1—Sn—S84.595 (10)C4—C5—H5119.9
Si—Sn—S169.19 (2)C6—C5—H5119.9
C7—S—Sn110.52 (6)C1—C6—C5120.28 (16)
C7—N1—H1A119.0 (18)C1—C6—H6119.9
C7—N1—H1B120.9 (17)C5—C6—H6119.9
H1A—N1—H1B120 (2)N2—C7—N1119.24 (18)
C7—N2—H2A120.3 (19)N2—C7—S118.15 (15)
C7—N2—H2B119 (2)N1—C7—S122.58 (15)
H2A—N2—H2B120 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1B···Cl20.86 (3)2.50 (3)3.345 (2)166 (2)
N2—H2A···Cl1ii0.81 (3)2.41 (3)3.2119 (19)170 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1B⋯Cl20.86 (3)2.50 (3)3.345 (2)166 (2)
N2—H2A⋯Cl1i 0.81 (3)2.41 (3)3.2119 (19)170 (3)

Symmetry code: (i) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  Dichloridobis(di-tert-butyl-methyl-phosphine oxide-κO)diphenyl-tin(IV).

Authors:  Manuela Müller; Hans-Wolfram Lerner; Michael Bolte
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-05-10

4.  μ(2)-Oxalato-bis-[triphen-yl(thio-urea-κS)tin(IV)].

Authors:  Yaya Sow; Libasse Diop; Kieran C Molloy; Gabrielle Kociok-Kohn
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-10-06
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1.  Di-chlorido-dimethyl-bis-(thio-urea-κS)tin(IV).

Authors:  Yaya Sow; Libasse Diop; Manuel A Fernandes; Helen Stoeckli-Evans
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