Literature DB >> 24094838

An engineered monomeric Zoanthus sp. yellow fluorescent protein.

Hiofan Hoi1, Elizabeth S Howe, Yidan Ding, Wei Zhang, Michelle A Baird, Brittney R Sell, John R Allen, Michael W Davidson, Robert E Campbell.   

Abstract

Protein engineering has created a palette of monomeric fluorescent proteins (FPs), but there remains an ~30 nm spectral gap between the most red-shifted useful Aequorea victoria green FP (GFP) variants and the most blue-shifted useful Discosoma sp. red FP (RFP) variants. To fill this gap, we have engineered a monomeric version of the yellow FP (YFP) from Zoanthus sp. coral. Our preferred variant, designated as mPapaya1, displays excellent fluorescent brightness, good photostability, and retains its monomeric character both in vitro and in living cells in the context of protein chimeras. We demonstrate that mPapaya1 can serve as a good Förster resonance energy transfer (FRET) acceptor when paired with an mTFP1 donor. mPapaya1 is a valuable addition to the palette of FP variants that are useful for multicolor imaging and FRET-based biosensing.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24094838     DOI: 10.1016/j.chembiol.2013.08.008

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  16 in total

1.  Engineering and characterizing monomeric fluorescent proteins for live-cell imaging applications.

Authors:  Hui-Wang Ai; Michelle A Baird; Yi Shen; Michael W Davidson; Robert E Campbell
Journal:  Nat Protoc       Date:  2014-03-20       Impact factor: 13.491

Review 2.  Protein design: Past, present, and future.

Authors:  Lynne Regan; Diego Caballero; Michael R Hinrichsen; Alejandro Virrueta; Danielle M Williams; Corey S O'Hern
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

3.  Out-of-Phase Imaging after Optical Modulation (OPIOM) for Multiplexed Fluorescence Imaging Under Adverse Optical Conditions.

Authors:  Raja Chouket; Ruikang Zhang; Agnès Pellissier-Tanon; Annie Lemarchand; Agathe Espagne; Thomas Le Saux; Ludovic Jullien
Journal:  Methods Mol Biol       Date:  2021

4.  A guide to choosing fluorescent protein combinations for flow cytometric analysis based on spectral overlap.

Authors:  Benjamin Kleeman; Andre Olsson; Tess Newkold; Matt Kofron; Monica DeLay; David Hildeman; H Leighton Grimes
Journal:  Cytometry A       Date:  2018-03-13       Impact factor: 4.355

5.  Analysis of Pelagia noctiluca proteome Reveals a Red Fluorescent Protein, a Zinc Metalloproteinase and a Peroxiredoxin.

Authors:  Bárbara Frazão; Alexandre Campos; Hugo Osório; Benjamin Thomas; Sérgio Leandro; Alexandre Teixeira; Vitor Vasconcelos; Agostinho Antunes
Journal:  Protein J       Date:  2017-04       Impact factor: 2.371

6.  Neurophotonic tools for microscopic measurements and manipulation: status report.

Authors:  Ahmed S Abdelfattah; Sapna Ahuja; Taner Akkin; Srinivasa Rao Allu; Joshua Brake; David A Boas; Erin M Buckley; Robert E Campbell; Anderson I Chen; Xiaojun Cheng; Tomáš Čižmár; Irene Costantini; Massimo De Vittorio; Anna Devor; Patrick R Doran; Mirna El Khatib; Valentina Emiliani; Natalie Fomin-Thunemann; Yeshaiahu Fainman; Tomas Fernandez-Alfonso; Christopher G L Ferri; Ariel Gilad; Xue Han; Andrew Harris; Elizabeth M C Hillman; Ute Hochgeschwender; Matthew G Holt; Na Ji; Kıvılcım Kılıç; Evelyn M R Lake; Lei Li; Tianqi Li; Philipp Mächler; Evan W Miller; Rickson C Mesquita; K M Naga Srinivas Nadella; U Valentin Nägerl; Yusuke Nasu; Axel Nimmerjahn; Petra Ondráčková; Francesco S Pavone; Citlali Perez Campos; Darcy S Peterka; Filippo Pisano; Ferruccio Pisanello; Francesca Puppo; Bernardo L Sabatini; Sanaz Sadegh; Sava Sakadzic; Shy Shoham; Sanaya N Shroff; R Angus Silver; Ruth R Sims; Spencer L Smith; Vivek J Srinivasan; Martin Thunemann; Lei Tian; Lin Tian; Thomas Troxler; Antoine Valera; Alipasha Vaziri; Sergei A Vinogradov; Flavia Vitale; Lihong V Wang; Hana Uhlířová; Chris Xu; Changhuei Yang; Mu-Han Yang; Gary Yellen; Ofer Yizhar; Yongxin Zhao
Journal:  Neurophotonics       Date:  2022-04-27       Impact factor: 4.212

Review 7.  Structure- and mechanism-guided design of single fluorescent protein-based biosensors.

Authors:  Yusuke Nasu; Yi Shen; Luke Kramer; Robert E Campbell
Journal:  Nat Chem Biol       Date:  2021-02-08       Impact factor: 15.040

8.  Characterization of Astrocyte Morphology and Function Using a Fast and Reliable Tissue Clearing Technique.

Authors:  Surya P Aryal; Khaga R Neupane; Abdullah A Masud; Christopher I Richards
Journal:  Curr Protoc       Date:  2021-10

9.  Orange fluorescent proteins: structural studies of LSSmOrange, PSmOrange and PSmOrange2.

Authors:  Sergei Pletnev; Daria M Shcherbakova; Oksana M Subach; Nadya V Pletneva; Vladimir N Malashkevich; Steven C Almo; Zbigniew Dauter; Vladislav V Verkhusha
Journal:  PLoS One       Date:  2014-06-24       Impact factor: 3.240

10.  Rapid fluorescent reporter quantification by leaf disc analysis and its application in plant-virus studies.

Authors:  Fabio Pasin; Satish Kulasekaran; Paolo Natale; Carmen Simón-Mateo; Juan Antonio García
Journal:  Plant Methods       Date:  2014-07-05       Impact factor: 4.993

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