| Literature DB >> 24083852 |
Nicole Rosenkötter1, Alexandra Ziemann, Luis Garcia-Castrillo Riesgo, Jean Bernard Gillet, Gernot Vergeiner, Thomas Krafft, Helmut Brand.
Abstract
BACKGROUND: Emergency medical service (EMS) data, particularly from the emergency department (ED), is a common source of information for syndromic surveillance. However, the entire EMS chain, consists of both out-of-hospital and in-hospital services. Differences in validity and timeliness across these data sources so far have not been studied. Neither have the differences in validity and timeliness of this data from different European countries. In this paper we examine the validity and timeliness of the entire chain of EMS data sources from three European regions for common syndromic influenza surveillance during the A(H1N1) influenza pandemic in 2009.Entities:
Mesh:
Year: 2013 PMID: 24083852 PMCID: PMC3852468 DOI: 10.1186/1471-2458-13-905
Source DB: PubMed Journal: BMC Public Health ISSN: 1471-2458 Impact factor: 3.295
Properties of the syndromic surveillance data sets
| | | | | | |||
|---|---|---|---|---|---|---|---|
| EMD-AT | Emergency Medical Dispatch | Austria | Tyrol data source covers 3 of 9 districts in Tyrol | Innsbruck city, Innsbruck district, Kufstein district | 380,000 | Dispatch Centre Tyrol | 1/2005-12/2008 |
| Except cases from December to March each year. | |||||||
| EP-AT | Emergency Physician service (ambulances) | Austria | Tyrol | Kufstein district | 99,000 | Dispatch Centre Tyrol | 1/2006-12/2008 |
| Except cases from November to March each year. | |||||||
| EP-BE | Emergency Physician service (ambulances) | Belgium | | | 10,500,000 | Ministry of Health, Belgium | 3/2009-8/2009 |
| ED-BE | Emergency Department | Belgium | Flemish Brabant | Leuven | a. 91,000 (Leuven) b. 1,000,000 (reference hospital for the region Flemish Brabant) | University Hospital Leuven | 3/2009-8/2009 |
| ED-ES | Emergency Department | Spain | Autonomous Region Cantabria | Santander | a. 300,000 (Santander) b. 580,000 (reference hospital for the Autonomous Region Cantabria) | University Hospital Marqués de Valdecilla | 8/7/2009-30/8/2009 |
*Baseline period = period which was used for the adjustment of the aberration detection algorithm (Poisson CUSUM).
Properties of the reference data
| | | | | ||||
|---|---|---|---|---|---|---|---|
| EMD-AT†, EP-AT† | Information on sick leave due to acute respiratory infections from a major Tyrolean health insurance. | regional | information for week x available on week x + 1 | 44 | 47 | 9 | 67$ |
| (Tyrol, Austria) | |||||||
| EP-BE, | Notified influenza cases of the sentinel general practitioner system. | national | information for week x available on week x + 3 | 40 | 44 | 10 | 70 |
| ED-BE | (Belgium) | ||||||
| ED-ES | Notified influenza cases of the sentinel general practitioner system. | regional | information for week x available on week x + 3 | 41 (period 1) | 43 | 8 | 56 |
| (Autonomous Region Cantabria, Spain) | 49 (period 2) | ||||||
*week: Monday (day 1), …, Sunday (day 7).
†The course of the autumn/winter wave was derived from regional data of the Tyrolean health insurance; the start week of the autumn/winter wave was derived from national data [27].
$last week of 2009 (week 52) contained 11 days.
Health information used for respiratory syndrome and influenza-like illness coding and respective code distribution in 2009
| EMD-AT | respiratory syndrome | AMPDS v12.0 | Boolean operator : OR | N | % |
| | | 6C1 | Breathing problems - Abnormal breathing | 465 | 26.9 |
| | | 6C1A | Breathing problems - abnormal breathing + asthma | 71 | 4.1 |
| | | 6D1 | Breathing problems - Not alerting | 750 | 43.3 |
| | | 6D1A | Breathing problems - not alerting + asthma | 230 | 13.3 |
| | | 6D2 | Breathing problems - Difficulty in speaking between breaths | 22 | 1.3 |
| | | 6D2A | Breathing problems - difficulty in speaking between breaths + asthma | 4 | 0.2 |
| | | 6D3 | Breathing problems - changing colour | 154 | 8.9 |
| | | 6D3A | Breathing problems - changing colour + asthma | 31 | 1.8 |
| | | 6D4 | Breathing problems - clammy | - | - |
| | | 6D4A | Breathing problems - clammy + asthma | - | - |
| | | 26A4 | Sick person - Fever/chills | 4 | 0.2 |
| | | 26O26 | Sick person - Sore throat (without difficulty breathing or swallowing) | - | - |
| | | | |||
| ILI* | ICD-10 | Boolean operator : OR | | | |
| | | J00 | Acute nasopharyngitis [common cold] | 1 | 1.6 |
| | | J02 | Acute pharyngitis (includes sore throat) | - | - |
| | | J04 | Acute laryngitis and tracheitis | 3 | 4.7 |
| | | J06 | Acute upper respiratory infections of multiple and unspecified sites | 8 | 12.5 |
| | | J09 | Avian Influenza | - | - |
| | | J10 | Influenza due to other identified influenza virus | 1 | 1.6 |
| | | J11 | Influenza, virus not identified | 8 | 12.5 |
| | | J16 | Pneumonia due to other infectious organisms, not elsewhere classified | 3 | 4.7 |
| | | J18 | Pneumonia, organism unspecified | 28 | 43.8 |
| | | R05 | Cough | 3 | 4.7 |
| | | R50 | Fever of other and unknown origin | 9 | 14.1 |
| | | | |||
| ILI* | ICD-9 | Boolean operator : OR | | | |
| | | 460 | Acute nasopharyngitis [common cold] | 22 | 1.2 |
| | | 462 | Pharyngitis, acute | - | - |
| | | 464 | Acute laryngitis and tracheitis | - | - |
| | | 464.0 | Acute laryngitis | - | - |
| | | 464.1 | Acute tracheitis | - | - |
| | | 464.2 | Acute laryngotracheitis | - | - |
| | | 465 | Acute upper respiratory infections of multiple or unspecified sites | - | - |
| | | 465.0 | Acute laryngopharyngitis | - | - |
| | | 465.8 | Acute upper respiratory infections of other multiple sites | - | - |
| | | 465.9 | Acute upper respiratory infections of unspecified site | - | - |
| | | 480.9 | Viral pneumonia unspecified | 56 | 3.0 |
| | | 488 | Influenza due to certain identified influenza viruses | - | - |
| | | 488.0 | Influenza due to identified avian influenza virus | - | - |
| | | 488.1 | Influenza due to identified novel h1n1 influenza virus | - | - |
| | | 487 | Influenza | - | - |
| | | 487.0 | Influenza with pneumonia | - | - |
| | | 487.1 | Influenza with other respiratory manifestations | - | - |
| | | 487.8 | Influenza with other manifestations | 109 | 5.9 |
| | | 486 | Pneumonia organism unspecified | 986 | 53.2 |
| | | 786.2 | Cough | 63 | 3.4 |
| | | 780.6 | Fever and other physiologic disturbances of temperature regulation | 618 | 33.3 |
| | | | |||
| ILI* | chief complaint or working diagnosis, Boolean operator : OR | | |||
| | free text including | cough, muscle pain, flu, H1N1, sore throat, influenza, fever | na† | na† | |
| | | | |||
| ILI* | case definition, Boolean operator : AND | | |||
| | | | i) the appearance of sudden symptoms and at least one of the four general symptoms (fever or slight fever (feverishness), headache, muscle pain, general malaise), and (ii) at least one of the three respiratory symptoms (cough, sore throat, difficulty breathing), as well as (iii) the absence of other diagnostic suspicion. | 1127 | 100.0 |
*ILI = influenza-like illness.
†na = not applicable.
Characteristics of the daily number of respiratory syndrome or influenza-like illness cases during baseline and the test period (week 36 to week 52, 2009), test statistics on the probability distribution of daily counts, the identification of day-of-the-week effects, and Poisson CUSUM parameters during individual baseline periods
| | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| 4.7 | 4.8 | 0.07 | 0.2 | 4.2 | 5.0 | 13.6 | 17.9 | 4.1 | 7.3 | |
| Standard deviation | 2.2 | 2.1 | 0.3 | 0.5 | 2.1 | 2.5 | 4.0 | 6.0 | 3.0 | 8.0 |
| 95% Confidence Interval | 4.6-4.9 | 4.4-5.5 | 0.05-0.09 | 0.2-0.3 | 3.9-4.5 | 4.5-5.4 | 13.0-14.2 | 16.8-19.0 | 3.3-4.9 | 5.9-8.7 |
| 5 | 5 | 0 | 0 | 4 | 5 | 13 | 18 | 3 | 5 | |
| 0 | 1 | 0 | 0 | 0 | 1 | 5 | 5 | 0 | 0 | |
| 15 | 12 | 2 | 2 | 10 | 14 | 27 | 34 | 15 | 36 | |
| yes | | no | | no | | no | | yes | | |
| evaluated by Kruskal-Wallis test | p = 0.007 | | p = 0.43 | | p = 0.70 | | p = 0.19 | | p = 0.04 | |
| | | | | | | | | | | |
| Monday | 4.7 | | 0.08 | | 4.1 | | 14.6 | | 2.7 | |
| Tuesday | 4.4 | | 0.08 | | 4.0 | | 12.3 | | 4.9 | |
| Wednesday | 4.4 | | 0.03 | | 3.9 | | 12.5 | | 5.5 | |
| Thursday | 5.0 | | 0.08 | | 3.6 | | 13.7 | | 4.8 | |
| Friday | 4.5 | | 0.12 | | 4.8 | | 14.6 | | 3.4 | |
| Saturday | 4.7 | | 0.08 | | 4.3 | | 13.2 | | 5.5 | |
| Sunday | 5.4 | | 0.05 | | 4.6 | | 14.4 | | 2.0 | |
| | | | | | | | | | | |
| no day-of-the-week variation | | | mean = 0.07 | | mean = 4.2 | | mean = 13.6 | | | |
| k = 1 | | k = 5 | | k =14 | ||||||
| S0 = 1 | | S0 = 4 | | S0 = 10 | ||||||
| h = 2 | | h = 7 | | h = 20 | ||||||
| day-of-the-week variation | | | | | | | | | | |
| stratum 1 | | | | | | | | | ||
| mean = 5.4 | | | | | | | | mean = 2.3 | | |
| k = 6 | | | | | | | | | | |
| S0 = 5 | | | | | | | | k = 3 | | |
| h = 10 | | | | | | | | S0 = 3 | | |
| | | | | | | | | h = 5 | | |
| stratum 2 | | | | | | | | | ||
| mean = 4.6 | | | | | | | | mean = 4.8 | | |
| k = 5 | | | | | | | | k = 5 | | |
| S0 = 4 | | | | | | | | S0 = 4 | | |
| h = 7 | h = 7 | |||||||||
*baseline = baseline period for Poisson CUSUM calibration: EMD-AT: 1/2005-12/2008 (except December to March); EP-AT: 1/2006-12/2008 (except November to March); EP-BE: 3/2009-8/2009); ED-BE: 3/2009-8/2009; ED-ES: 3/2009-8/2009.
†test = test period for validity and timeliness assessment; covers the autumn winter wave of pandemic A(H1N1) influenza in 2009 (week 36/2009 to week 52/2009).
Poisson CUSUM calibration: mean = baseline mean; k = reference value; S0 = head start value; h = threshold value.
Figure 1Time series of Austrian syndromic surveillance and reference data and documentation of Poisson CUSUM signals, week 36 (30.8.) to 52 (31.12.) in 2009. a) EMD-AT: Emergency Medical Dispatch, Tyrol, Austria. b) EP-AT: Emergency Physician Service (ambulances), Tyrol, Kufstein, Austria.
Results of three timeliness methods for the identification of the start of the autumn/winter wave of the A (H1N1) influenza pandemic (as reported by the reference data) with syndromic surveillance data in 2009
| EMD-AT | na* | not significant | 0 | -6 |
| EP-AT | na* | not significant | na* | na* |
| EP-BE | -1 | -1 | +10 | +2 |
| | | 0.60 | | |
| ED-BE | -1 | not significant | 0 | -8 |
| ED-ES | +1 | +1 | +19 (period 1) | +11 (period 1) |
| 0.89 | 0 (period 2) | -8 (period 2) | ||
*na = not applicable.
+reporting delay refers to the time needed for collecting and processing the data.
Figure 2Time series of Belgian syndromic surveillance and reference data and documentation of Poisson CUSUM signals, week 36 (30.8.) to 52 (31.12.) in 2009. a) EP-BE: Emergency Physician Service (ambulances), Belgium. b) ED-BE: Emergency department, University Hospital Leuven, Flemish Brabant, Belgium.
Figure 3Time series of Spanish syndromic surveillance and reference data and documentation of Poisson CUSUM signals, week 36 (30.8.) to 52 (31.12.) in 2009. ED-ES: Emergency department, University Hospital Marqués de Valdecilla, Santander, Autonomous Region Cantabria, Spain.
Sensitivity, specificity, and false detection rate of Poisson CUSUM signals for syndromic influenza surveillance during week 36 (30.8.) to week 52 (31.12.) in 2009
| EMD-AT | (3/9) | (5/8) | (5/67) | (53/56) | (3/6) | (3/8) |
| EP-AT | (0/9) | (8/8) | (0/67) | (56/56) | (0/0) | (0/0) |
| | | |||||
| EP-BE | (6/10) | (6/7) | (12/70) | (51/53) | (1/7) | (2/14) |
| ED-BE | (10/10) | (4/7) | (26/70) | (45/53) | (3/13) | (8/34) |
| ED-ES | (6/8) | (8/9) | (30/56) | (63/67) | (1/7) | (4/34) |
*Brackets: Number of weeks / days with at least one true-positive Poisson CUSUM signal in syndromic surveillance data divided by number of pandemic weeks/days according to reference data.
†Brackets: Number of true-negative weeks / days (no Poisson CUSUM signal) in syndromic surveillance data divided by number of weeks / days outside the pandemic period according to reference data.
‡Brackets: Number of weeks/days with a false-positive Poisson CUSUM signal in syndromic surveillance data divided by all Poisson CUSUM signals of syndromic surveillance data.