Literature DB >> 24067607

Biological techniques: Chromosomes captured one by one.

Job Dekker, Leonid Mirny.   

Abstract

Mesh：

Year:  2013        PMID： 24067607     DOI： 10.1038/nature12691

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


× No keyword cloud information.
  12 in total

1.  Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

Authors:  Eitan Yaffe; Amos Tanay
Journal:  Nat Genet       Date:  2011-10-16       Impact factor: 38.330

Review 2.  Chromosome territories.

Authors:  Thomas Cremer; Marion Cremer
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-03       Impact factor: 10.005

Review 3.  Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data.

Authors:  Job Dekker; Marc A Marti-Renom; Leonid A Mirny
Journal:  Nat Rev Genet       Date:  2013-05-09       Impact factor: 53.242

Review 4.  Genome architecture: domain organization of interphase chromosomes.

Authors:  Wendy A Bickmore; Bas van Steensel
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

5.  Capturing chromosome conformation.

Authors:  Job Dekker; Karsten Rippe; Martijn Dekker; Nancy Kleckner
Journal:  Science       Date:  2002-02-15       Impact factor: 47.728

6.  Spatial partitioning of the regulatory landscape of the X-inactivation centre.

Authors:  Elphège P Nora; Bryan R Lajoie; Edda G Schulz; Luca Giorgetti; Ikuhiro Okamoto; Nicolas Servant; Tristan Piolot; Nynke L van Berkum; Johannes Meisig; John Sedat; Joost Gribnau; Emmanuel Barillot; Nils Blüthgen; Job Dekker; Edith Heard
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

7.  Comprehensive mapping of long-range interactions reveals folding principles of the human genome.

Authors:  Erez Lieberman-Aiden; Nynke L van Berkum; Louise Williams; Maxim Imakaev; Tobias Ragoczy; Agnes Telling; Ido Amit; Bryan R Lajoie; Peter J Sabo; Michael O Dorschner; Richard Sandstrom; Bradley Bernstein; M A Bender; Mark Groudine; Andreas Gnirke; John Stamatoyannopoulos; Leonid A Mirny; Eric S Lander; Job Dekker
Journal:  Science       Date:  2009-10-09       Impact factor: 47.728

8.  Three-dimensional folding and functional organization principles of the Drosophila genome.

Authors:  Tom Sexton; Eitan Yaffe; Ephraim Kenigsberg; Frédéric Bantignies; Benjamin Leblanc; Michael Hoichman; Hugues Parrinello; Amos Tanay; Giacomo Cavalli
Journal:  Cell       Date:  2012-01-19       Impact factor: 41.582

9.  Topological domains in mammalian genomes identified by analysis of chromatin interactions.

Authors:  Jesse R Dixon; Siddarth Selvaraj; Feng Yue; Audrey Kim; Yan Li; Yin Shen; Ming Hu; Jun S Liu; Bing Ren
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

10.  Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.

Authors:  Takashi Nagano; Yaniv Lubling; Tim J Stevens; Stefan Schoenfelder; Eitan Yaffe; Wendy Dean; Ernest D Laue; Amos Tanay; Peter Fraser
Journal:  Nature       Date:  2013-09-25       Impact factor: 49.962
View more
  6 in total

Review 1.  An Overview of Genome Organization and How We Got There: from FISH to Hi-C.

Authors:  James Fraser; Iain Williamson; Wendy A Bickmore; Josée Dostie
Journal:  Microbiol Mol Biol Rev       Date:  2015-09       Impact factor: 11.056

2.  Assessing the limits of restraint-based 3D modeling of genomes and genomic domains.

Authors:  Marie Trussart; François Serra; Davide Baù; Ivan Junier; Luís Serrano; Marc A Marti-Renom
Journal:  Nucleic Acids Res       Date:  2015-03-23       Impact factor: 16.971

3.  Insulator function and topological domain border strength scale with architectural protein occupancy.

Authors:  Kevin Van Bortle; Michael H Nichols; Li Li; Chin-Tong Ong; Naomi Takenaka; Zhaohui S Qin; Victor G Corces
Journal:  Genome Biol       Date:  2014-06-30       Impact factor: 13.583

Review 4.  Condensin-mediated chromosome organization and gene regulation.

Authors:  Alyssa C Lau; Györgyi Csankovszki
Journal:  Front Genet       Date:  2015-01-13       Impact factor: 4.599

5.  The Dm-Myb Oncoprotein Contributes to Insulator Function and Stabilizes Repressive H3K27me3 PcG Domains.

Authors:  Juan F Santana; Mrutyunjaya Parida; Abby Long; Joshua Wankum; Anthony J Lilienthal; Krishna M Nukala; J Robert Manak
Journal:  Cell Rep       Date:  2020-03-10       Impact factor: 9.423

6.  3DeFDR: statistical methods for identifying cell type-specific looping interactions in 5C and Hi-C data.

Authors:  Lindsey R Fernandez; Thomas G Gilgenast; Jennifer E Phillips-Cremins
Journal:  Genome Biol       Date:  2020-08-28       Impact factor: 13.583
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.