Literature DB >> 24044695

Experiments optimized for magic angle spinning and oriented sample solid-state NMR of proteins.

Bibhuti B Das1, Eugene C Lin, Stanley J Opella.   

Abstract

Structure determination by solid-state NMR of proteins is rapidly advancing as a result of recent developments of samples, experimental methods, and calculations. There are a number of different solid-state NMR approaches that utilize stationary samples, aligned samples, or magic angle spinning of unoriented "powder" samples, and depending on the sample and the experimental method they can emphasize the measurement of distances or angles, ideally both, as sources of structural constraints. Multidimensional correlation spectroscopy of low-gamma nuclei such as (15)N and (13)C is an important step for making resonance assignments and measurements of angular restraints in membrane proteins. However, the efficiency of coherence transfer predominantly depends upon the strength of the dipole-dipole interaction, and this can vary from site to site and between sample alignments, for example, during the mixing of (13)C and (15)N magnetization in stationary aligned and in magic angle spinning samples. Here, we demonstrate that the efficiency of polarization transfer can be improved by using adiabatic demagnetization and remagnetization techniques on stationary aligned samples, and proton assisted insensitive nuclei cross-polarization in magic angle sample spinning samples. The adiabatic cross-polarization technique provides an alternative mechanism for spin-diffusion experiments correlating (15)N/(15)N and (15)N/(13)C chemical shifts over large distances. Improved efficiency in cross-polarization with 40-100% sensitivity enhancements is observed in proteins and single crystals, respectively. We describe solid-state NMR experimental techniques that are optimal for membrane proteins in liquid crystalline phospholipid bilayers under physiological conditions. The techniques are illustrated with data from single crystals both of peptides and of membrane proteins in phospholipid bilayers.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24044695      PMCID: PMC3846429          DOI: 10.1021/jp407154h

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  35 in total

1.  PITANSEMA-MAS, a solid-state NMR method to measure heteronuclear dipolar couplings under MAS.

Authors:  K Yamamoto; V L Ermakov; D K Lee; A Ramamoorthy
Journal:  Chem Phys Lett       Date:  2005-06-07       Impact factor: 2.328

2.  Proton assisted insensitive nuclei cross polarization.

Authors:  Józef R Lewandowski; Gaël De Paëpe; Robert G Griffin
Journal:  J Am Chem Soc       Date:  2007-01-31       Impact factor: 15.419

3.  Mismatched Hartmann-Hahn conditions cause proton-mediated intermolecular magnetization transfer between dilute low-spin nuclei in NMR of static solids.

Authors:  Alexander A Nevzorov
Journal:  J Am Chem Soc       Date:  2008-08-02       Impact factor: 15.419

4.  Spin diffusion in resolved solid-state NMR spectra.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1985-11-01

Review 5.  Probes for high field solid-state NMR of lossy biological samples.

Authors:  Christopher V Grant; Chin H Wu; Stanley J Opella
Journal:  J Magn Reson       Date:  2010-03-31       Impact factor: 2.229

6.  NMR structural analysis of a membrane protein: bacteriorhodopsin peptide backbone orientation and motion.

Authors:  B A Lewis; G S Harbison; J Herzfeld; R G Griffin
Journal:  Biochemistry       Date:  1985-08-13       Impact factor: 3.162

7.  Dilute spin-exchange assignment of solid-state NMR spectra of oriented proteins: acetylcholine M2 in bilayers.

Authors:  F M Marassi; J J Gesell; A P Valente; Y Kim; M Oblatt-Montal; M Montal; S J Opella
Journal:  J Biomol NMR       Date:  1999-06       Impact factor: 2.835

8.  Structural basis of the temperature transition of Pf1 bacteriophage.

Authors:  David S Thiriot; Alexander A Nevzorov; Stanley J Opella
Journal:  Protein Sci       Date:  2005-03-01       Impact factor: 6.725

9.  Structure of the coat protein in Pf1 bacteriophage determined by solid-state NMR spectroscopy.

Authors:  David S Thiriot; Alexander A Nevzorov; Lena Zagyanskiy; Chin H Wu; Stanley J Opella
Journal:  J Mol Biol       Date:  2004-08-13       Impact factor: 5.469

10.  The fluid mosaic model of the structure of cell membranes.

Authors:  S J Singer; G L Nicolson
Journal:  Science       Date:  1972-02-18       Impact factor: 47.728

View more
  1 in total

Review 1.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.