Literature DB >> 24043781

SUMOylation is essential for sex-specific assembly and function of the Caenorhabditis elegans dosage compensation complex on X chromosomes.

Rebecca R Pferdehirt1, Barbara J Meyer.   

Abstract

The essential process of dosage compensation equalizes X-chromosome gene expression between Caenorhabditis elegans XO males and XX hermaphrodites through a dosage compensation complex (DCC) that is homologous to condensin. The DCC binds to both X chromosomes of hermaphrodites to repress transcription by half. Here, we show that posttranslational modification by the SUMO (small ubiquitin-like modifier) conjugation pathway is essential for sex-specific assembly and function of the DCC on X. Depletion of SUMO in vivo severely disrupts binding of particular DCC subunits and causes changes in X-linked gene expression similar to those caused by deleting genes encoding DCC subunits. Three DCC subunits are SUMOylated, and SUMO depletion preferentially reduces their binding to X, suggesting that SUMOylation of DCC subunits is essential for robust association with X. DCC SUMOylation is triggered by the signal that initiates DCC assembly onto X. The initial step of assembly-binding of X-targeting factors to recruitment sites on X-is independent of SUMOylation, but robust binding of the complete complex requires SUMOylation. SUMOylated DCC subunits are enriched at recruitment sites, and SUMOylation likely enhances interactions between X-targeting factors and condensin subunits that facilitate DCC binding beyond the low level achieved without SUMOylation. DCC subunits also participate in condensin complexes essential for chromosome segregation, but their SUMOylation occurs only in the context of the DCC. Our results reinforce a newly emerging theme in which multiple proteins of a complex are collectively SUMOylated in response to a specific stimulus, leading to accelerated complex formation and enhanced function.

Entities:  

Keywords:  chromatin; epigenetics; sexual dimorphism

Mesh:

Substances:

Year:  2013        PMID: 24043781      PMCID: PMC3791726          DOI: 10.1073/pnas.1315793110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  36 in total

1.  SUMO-1 conjugation in vivo requires both a consensus modification motif and nuclear targeting.

Authors:  M S Rodriguez; C Dargemont; R T Hay
Journal:  J Biol Chem       Date:  2000-12-21       Impact factor: 5.157

2.  A trithorax-group complex purified from Saccharomyces cerevisiae is required for methylation of histone H3.

Authors:  Peter L Nagy; Joachim Griesenbeck; Roger D Kornberg; Michael L Cleary
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

3.  Protein group modification and synergy in the SUMO pathway as exemplified in DNA repair.

Authors:  Ivan Psakhye; Stefan Jentsch
Journal:  Cell       Date:  2012-11-01       Impact factor: 41.582

4.  Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation.

Authors:  William S Kruesi; Leighton J Core; Colin T Waters; John T Lis; Barbara J Meyer
Journal:  Elife       Date:  2013-06-18       Impact factor: 8.140

Review 5.  Dosage compensation in Drosophila melanogaster: epigenetic fine-tuning of chromosome-wide transcription.

Authors:  Thomas Conrad; Asifa Akhtar
Journal:  Nat Rev Genet       Date:  2012-01-18       Impact factor: 53.242

6.  SUMO modification is required for in vivo Hox gene regulation by the Caenorhabditis elegans Polycomb group protein SOP-2.

Authors:  Hong Zhang; Gromoslaw A Smolen; Rachel Palmer; Andrea Christoforou; Sander van den Heuvel; Daniel A Haber
Journal:  Nat Genet       Date:  2004-04-11       Impact factor: 38.330

Review 7.  Function and regulation of SUMO proteases.

Authors:  Christopher M Hickey; Nicole R Wilson; Mark Hochstrasser
Journal:  Nat Rev Mol Cell Biol       Date:  2012-12       Impact factor: 94.444

8.  Cell cycle-regulated attachment of the ubiquitin-related protein SUMO to the yeast septins.

Authors:  E S Johnson; G Blobel
Journal:  J Cell Biol       Date:  1999-11-29       Impact factor: 10.539

9.  Functional and phylogenetic analysis of the ubiquitylation system in Caenorhabditis elegans: ubiquitin-conjugating enzymes, ubiquitin-activating enzymes, and ubiquitin-like proteins.

Authors:  Donald Jones; Emily Crowe; Tracy A Stevens; E Peter M Candido
Journal:  Genome Biol       Date:  2001-12-12       Impact factor: 13.583

10.  Function of the C. elegans T-box factor TBX-2 depends on SUMOylation.

Authors:  Paul Huber; Tanya Crum; Lynn M Clary; Tom Ronan; Adelaide V Packard; Peter G Okkema
Journal:  Cell Mol Life Sci       Date:  2013-04-18       Impact factor: 9.261

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  17 in total

1.  The insulin/IGF signaling cascade modulates SUMOylation to regulate aging and proteostasis in Caenorhabditis elegans.

Authors:  Lorna Moll; Noa Roitenberg; Michal Bejerano-Sagie; Hana Boocholez; Filipa Carvalhal Marques; Yuli Volovik; Tayir Elami; Atif Ahmed Siddiqui; Danielle Grushko; Adi Biram; Bar Lampert; Hana Achache; Tommer Ravid; Yonatan B Tzur; Ehud Cohen
Journal:  Elife       Date:  2018-11-07       Impact factor: 8.140

2.  SUMO as a nuclear hormone receptor effector: New insights into combinatorial transcriptional regulation.

Authors:  Jordan D Ward; Keith R Yamamoto; Masako Asahina
Journal:  Worm       Date:  2014-05-23

Review 3.  Caenorhabditis elegans Dosage Compensation: Insights into Condensin-Mediated Gene Regulation.

Authors:  Sarah Elizabeth Albritton; Sevinç Ercan
Journal:  Trends Genet       Date:  2017-10-13       Impact factor: 11.639

Review 4.  Balancing up and downregulation of the C. elegans X chromosomes.

Authors:  Alyssa C Lau; Györgyi Csankovszki
Journal:  Curr Opin Genet Dev       Date:  2015-05-16       Impact factor: 5.578

Review 5.  The X chromosome in C. elegans sex determination and dosage compensation.

Authors:  Barbara J Meyer
Journal:  Curr Opin Genet Dev       Date:  2022-04-28       Impact factor: 4.665

6.  Function of the C. elegans T-box factor TBX-2 depends on interaction with the UNC-37/Groucho corepressor.

Authors:  Paul Huber; Tanya Crum; Peter G Okkema
Journal:  Dev Biol       Date:  2016-06-02       Impact factor: 3.582

7.  Precise and heritable genome editing in evolutionarily diverse nematodes using TALENs and CRISPR/Cas9 to engineer insertions and deletions.

Authors:  Te-Wen Lo; Catherine S Pickle; Steven Lin; Edward J Ralston; Mark Gurling; Caitlin M Schartner; Qian Bian; Jennifer A Doudna; Barbara J Meyer
Journal:  Genetics       Date:  2013-08-09       Impact factor: 4.562

8.  Dynamic SUMO modification regulates mitotic chromosome assembly and cell cycle progression in Caenorhabditis elegans.

Authors:  Federico Pelisch; Remi Sonneville; Ehsan Pourkarimi; Ana Agostinho; J Julian Blow; Anton Gartner; Ronald T Hay
Journal:  Nat Commun       Date:  2014-12-05       Impact factor: 14.919

9.  Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans.

Authors:  Maxwell Kramer; Anna-Lena Kranz; Amanda Su; Lara H Winterkorn; Sarah Elizabeth Albritton; Sevinc Ercan
Journal:  PLoS Genet       Date:  2015-12-07       Impact factor: 5.917

10.  Proteotoxic stress reprograms the chromatin landscape of SUMO modification.

Authors:  Anne Seifert; Pietà Schofield; Geoffrey J Barton; Ronald T Hay
Journal:  Sci Signal       Date:  2015-07-07       Impact factor: 8.192

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