| Literature DB >> 24031928 |
Khadija Shabbiri1, Ahmad Adnan, Sania Jamil, Waqar Ahmad, Bushra Noor, H M Rafique.
Abstract
Various cultivation parameters were optimized for the production of extra cellular protease by Brevibacterium linens DSM 20158 grown in solid state fermentation conditions using statistical approach. The cultivation variables were screened by the Plackett-Burman design and four significant variables (soybean meal, wheat bran, (NH4)2SO4 and inoculum size were further optimized via central composite design (CCD) using a response surface methodological approach. Using the optimal factors (soybean meal 12.0g, wheat bran 8.50g, (NH4)2SO4) 0.45g and inoculum size 3.50%), the rate of protease production was found to be twofold higher in the optimized medium as compared to the unoptimized reference medium.Entities:
Keywords: Brevibacterium linens; Central Composite Design (CCD); Plackett–Burman Design; Protease; Solid-state fermentation
Year: 2012 PMID: 24031928 PMCID: PMC3768899 DOI: 10.1590/S1517-838220120003000031
Source DB: PubMed Journal: Braz J Microbiol ISSN: 1517-8382 Impact factor: 2.476
Experimental variables at different levels used for the production of protease by Bravibacterium linens using Plackett-Burman design.
| Variables | Codes | Units | Experimental values | ||
|---|---|---|---|---|---|
| Lower (-1.000) | Centre (0.000) | Higher (1.000) | |||
| Incubation Period | A | hrs | 24 | 48 | 72 |
| Moisture content | B | % | 75 | 85 | 95 |
| Inoculum Size | C | % (v/w) | 0.1 | 2.55 | 5 |
| Wheat bran | D | g | 0 | 7.5 | 15 |
| Soybean meal | E | g | 0 | 7.5 | 15 |
| Yeast extract | F | g | 0.01 | 0.51 | 1.0 |
| MgSO4.7H2O | G | g | 0.1 | 0.3 | 0.5 |
| (NH4)2SO4 | H | g | 0.01 | 0.51 | 1.0 |
| Temperature | I | 0C | 30 | 37 | 44 |
Plackett-Burman design used for screening of nine variables with observed and predicted protease activity.
| Run No | Experimental Values | Protease (U/g) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| A | B | C | D | E | F | G | H | I | Observed | Predicted | |
| 1 | 24.00 | 75.00 | 5.00 | 0.00 | 15.00 | 1.00 | 0.05 | 1.00 | 44.00 | 2501±218 | 2486 |
| 2 | 48.00 | 85.00 | 2.55 | 7.50 | 7.50 | 0.51 | 0.10 | 0.51 | 37.00 | 2497±116 | 1607 |
| 3 | 72.00 | 95.00 | 0.10 | 15.00 | 15.00 | 1.00 | 0.05 | 0.01 | 30.00 | 2055±90 | 2048 |
| 4 | 24.00 | 95.00 | 0.10 | 15.00 | 15.00 | 0.01 | 0.15 | 1.00 | 44.00 | 1842±112 | 1817 |
| 5 | 48.00 | 85.00 | 2.55 | 7.50 | 7.50 | 0.51 | 0.10 | 0.51 | 37.00 | 2509±131 | 1607 |
| 6 | 24.00 | 95.00 | 5.00 | 15.00 | 0.00 | 0.01 | 0.05 | 1.00 | 30.00 | 2074±43 | 2029 |
| 7 | 72.00 | 95.00 | 5.00 | 0.00 | 0.00 | 0.01 | 0.15 | 0.01 | 44.00 | 600±180 | 615 |
| 8 | 72.00 | 95.00 | 0.10 | 0.00 | 0.00 | 1.00 | 0.05 | 1.00 | 44.00 | 1058±171 | 1011 |
| 9 | 24.00 | 75.00 | 0.10 | 0.00 | 0.00 | 0.01 | 0.05 | 0.01 | 30.00 | 189±176 | 191 |
| 10 | 24.00 | 95.00 | 5.00 | 0.00 | 15.00 | 1.00 | 0.15 | 0.01 | 30.00 | 1819±248 | 1757 |
| 11 | 48.00 | 85.00 | 2.55 | 7.50 | 7.50 | 0.51 | 0.10 | 0.51 | 37.00 | 1526±298 | 1607 |
| 12 | 72.00 | 75.00 | 5.00 | 15.00 | 0.00 | 1.00 | 0.15 | 1.00 | 30.00 | 2445±25 | 2484 |
| 13 | 48.00 | 85.00 | 2.55 | 7.50 | 7.50 | 0.51 | 0.10 | 0.51 | 37.00 | 2470±34 | 1607 |
| 14 | 72.00 | 75.00 | 5.00 | 15.00 | 15.00 | 0.01 | 0.05 | 0.01 | 44.00 | 2375±2 | 2381 |
| 15 | 48.00 | 85.00 | 2.55 | 7.50 | 7.50 | 0.51 | 0.10 | 0.51 | 37.00 | 2455±170 | 1607 |
| 16 | 24.00 | 75.00 | 0.10 | 15.00 | 0.00 | 1.00 | 0.15 | 0.01 | 44.00 | 888±161 | 896 |
| 17 | 72.00 | 75.00 | 0.10 | 0.00 | 15.00 | 0.01 | 0.15 | 1.00 | 30.00 | 1550±168 | 1567 |
ANOVA (analysis of variance) for the experimental parameters of Plackett Burman design affecting protease production.
| Variable | Coefficient | Standard Error | F-value | p-value |
|---|---|---|---|---|
| Model | - | - | 5.85 | 0.0218 |
| Lack of Fit | - | - | 0.011 | 0.9952 |
| Incubation Period | 64.17 | 101.10 | 0.40 | 0.5490 |
| Moisture Level | -41.67 | 101.10 | 0.17 | 0.6946 |
| Inoculum Size | 352.67 | 101.10 | 12.17 | 0.0130 |
| Wheat Bran | 330.17 | 101.10 | 10.67 | 0.0171 |
| Soybean meal | 407.33 | 101.10 | 16.23 | 0.0069 |
| Yeast Extract | 178.00 | 101.10 | 3.10 | 0.1288 |
| MgSO4 | -92.33 | 101.10 | 0.83 | 0.3963 |
| (NH4)2SO4 | 295.33 | 101.10 | 8.53 | 0.0266 |
| Temperature | -72.33 | 101.10 | 0.51 | 0.5012 |
Significant values
Non-significant values at p< 0.05
Experimental variables, codes, units, ranges and levels of the independent variables for response surface methodological experiments.
| Variables | Symbol code | Units | Levels | ||||
|---|---|---|---|---|---|---|---|
| -2.0 | -1 | 0 | +1 | +2.0 | |||
| Inoculum size | C | % | -2.35 | 0.1 | 2.55 | 5 | 7.45 |
| Wheat bran | D | g | -7.50 | 0 | 7.5 | 15 | 22.50 |
| Soybean meal | E | g | -7.50 | 0 | 7.5 | 15 | 22.50 |
| (NH4)2SO4 | H | g | -0.48 | 0.01 | 0.51 | 1.0 | 1.50 |
Central Composite Design of the nutrients and physical parameters in real units for the response of protease along with its predicted & observed values.
| Run No. | Experimental values | Protease (U/g) | ||||
|---|---|---|---|---|---|---|
| Inoculum size | Wheat bran | Soybean meal | (NH4)2SO4 | Obserevd | Predicted | |
| 1 | 2.55 | 7.50 | 7.50 | 0.51 | 6324±224 | 6383 |
| 2 | 0.10 | 0.00 | 15.00 | 0.01 | 3367±119 | 3367 |
| 3 | 2.55 | -7.50 | 7.50 | 0.51 | 2610±92 | 2569 |
| 4 | 7.45 | 7.50 | 7.50 | 0.51 | 3246±115 | 3097 |
| 5 | 2.55 | 22.50 | 7.50 | 0.51 | 3808±135 | 3735 |
| 6 | 0.10 | 0.00 | 0.00 | 0.01 | 1256±44 | 1263 |
| 7 | 5.00 | 0.00 | 15.00 | 1.00 | 5207±185 | 5188 |
| 8 | 2.55 | 7.50 | -7.50 | 0.51 | 2364±175 | 2310 |
| 9 | 0.10 | 15.00 | 0.00 | 1.00 | 2430±179 | 2408 |
| 10 | 2.55 | 7.50 | 7.50 | -0.48 | 5395±248 | 5382 |
| 11 | 5.00 | 15.00 | 15.00 | 0.01 | 6733±298 | 6782 |
| 12 | 0.10 | 15.00 | 15.00 | 1.00 | 2220±28 | 2237 |
| 13 | 5.00 | 0.00 | 0.00 | 1.00 | 1287±37 | 1326 |
| 14 | -2.35 | 7.50 | 7.50 | 0.51 | 55±2 | 41.6 |
| 15 | 2.55 | 7.50 | 7.50 | 0.51 | 6309±185 | 6383 |
| 16 | 2.55 | 7.50 | 7.50 | 1.50 | 5981±176 | 6036 |
| 17 | 2.55 | 7.50 | 7.50 | 0.51 | 6232±183 | 6383 |
| 18 | 2.55 | 7.50 | 7.50 | 0.51 | 6504±207 | 6383 |
| 19 | 2.55 | 7.50 | 22.50 | 0.51 | 5483±175 | 5509 |
| 20 | 2.55 | 7.50 | 7.50 | 0.51 | 6268±200 | 6383 |
| 21 | 5.00 | 15.00 | 0.00 | 0.01 | 6089±194 | 6182 |
Regression analysis of the central composite design.
| Variables | Coefficient Estimate | Standard Error | F-value | p-value |
|---|---|---|---|---|
| Intercept | 2464.12 | 18.90 | - | - |
| C | 797.88 | 33.85 | 555.61 | < 0.0001 |
| D | 299.47 | 33.85 | 78.27 | 0.0001 |
| E | 793.85 | 23.94 | 1100.03 | < 0.0001 |
| H | 146.62 | 33.85 | 18.76 | 0.0049 |
| CD | 934.16 | 47.87 | 380.81 | < 0.0001 |
| CE | 332.67 | 33.85 | 96.59 | < 0.0001 |
| CH | -494.89 | 47.87 | 106.88 | < 0.0001 |
| DE | -699.57 | 33.85 | 427.14 | < 0.0001 |
| DH | -457.32 | 47.87 | 91.27 | < 0.0001 |
| EH | 119.23 | 33.85 | 12.41 | 0.0125 |
| C2 | -1174.74 | 19.11 | 3778.61 | < 0.0001 |
| D2 | -785.12 | 19.11 | 1687.80 | < 0.0001 |
| E2 | -606.44 | 19.11 | 1007.00 | < 0.0001 |
| H2 | -165.39 | 19.11 | 74.90 | 0.0001 |
Analysis of variance (ANOVA) for the second-order polynomial model.
| Source | SS | DF | MS | F-value | p-value |
|---|---|---|---|---|---|
| Model | 8.88E+007 | 14 | 6.34E+006 | 544.24 | < 0.0001 |
| Residual | 54997 | 6 | 9166.3 | ||
| Lack of Fit | 11026.3 | 2 | 5513.1 | 0.50 | 0.6392 |
| Pure Error | 43971.3 | 4 | 10992.7 | - | - |
| Total | 8.891E+007 | 20 | - | - | - |
Figure 1Contour plots for Protease production showing the interactive effects of wheat bran and inoculum size (A), soybean meal and inoculum size (B), (NH4)2SO4 and inoculum size (C), soybean meal and wheat bran (D), (NH4)2SO4 and wheat bran (E), soybean meal and (NH4)2SO4 (F). Other variables were kept at central level.
Figure 2Lineweaver-Burk plot for neutral protease under varying substrate (casein) concentrations (5–35 mg/mL) indicating the Km and Vmax values