| Literature DB >> 24015270 |
Lindan Ji1, Xiaobo Cai, Lina Zhang, Lijuan Fei, Lin Wang, Jia Su, Lissy Lazar, Jin Xu, Yaping Zhang.
Abstract
BACKGROUND: Renin-angiotensin-aldosterone system (RAAS) is the most important endocrine blood pressure control mechanism in our body, genes encoding components of this system have been strong candidates for the investigation of the genetic basis of hypertension. However, previous studies mainly focused on limited polymorphisms, thus we carried out a case-control study in the Han Chinese population to systemically investigate the association between polymorphisms in the RAAS genes and essential hypertension.Entities:
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Year: 2013 PMID: 24015270 PMCID: PMC3756014 DOI: 10.1371/journal.pone.0072701
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Baseline characters of the investigated participants.
| Variables | Case | Control |
|
| Number | 905 | 905 | |
| Male/Female | 392/513 | 392/513 | |
| Age (y) | 56.91±7.37 | 56.60±7.51 |
|
| BMI(Kg/m2) | 24.65±3.24 | 23.21±2.86 |
|
| HDL (mM) | 1.41±0.35 | 1.41±0.32 |
|
| TC (mM) | 5.34±1.00 | 5.17±0.93 |
|
| TG (mM) | 2.02±1.68 | 1.63±1.12 |
|
| Smoking habit | 173 | 147 |
|
| Alcohol abuse | 152 | 148 |
|
BMI, body mass index; HDL, high-density lipoprotein; TC, total cholesterol; TG, triglyceride.
Figure 1Negative Log P values for the association of 41 single-nucleotide polymorphisms in 5 candidate genes of renin-angiotensin-aldosterone system with hypertension.
The P values were obtained from the comparison of two allele frequencies. Labeled SNPs had a P value less than 0.01.
Genotype distributions of those SNPs significantly associated with hypertension.
| SNP | Gene | Group | Genotype | MAF |
| OR | 95% CI | ||
| rs3789678 |
| Case | 690 (CC) | 159 (CT) | 45 (TT) | 0.14 | 0.002 | 1.32 | 1.10–1.58 |
| Control | 626 (CC) | 236 (CT) | 41 (TT) | 0.18 | |||||
| rs2493132 |
| Case | 373 (CC) | 410 (CT) | 111 (TT) | 0.35 | 0.003 | 1.23 | 1.07–1.40 |
| Control | 316 (CC) | 452 (CT) | 137 (TT) | 0.40 | |||||
| rs4305 |
| Case | 155 (AA) | 441 (AG) | 300 (GG) | 0.36 | 0.001 | 1.26 | 1.10–1.44 |
| Control | 103 (AA) | 450 (AG) | 348 (GG) | 0.42 | |||||
| rs275645 |
| Case | 455 (AA) | 395 (AG) | 43 (GG) | 0.27 | 0.002 | 1.27 | 1.09–1.48 |
| Control | 535 (AA) | 333 (AG) | 37 (GG) | 0.22 | |||||
| rs3802230 |
| Case | 80 (AA) | 348 (AC) | 470 (CC) | 0.28 | 0.001 | 1.28 | 1.13–1.48 |
| Control | 89 (AA) | 428 (AC) | 385 (CC) | 0.34 | |||||
| rs10086846 |
| Case | 469 (CC) | 277 (CT) | 151 (TT) | 0.32 | 0.006 | 1.21 | 1.06–1.39 |
| Control | 413(CC) | 318 (CT) | 172 (TT) | 0.37 | |||||
The P values were obtained from the comparison of two allele frequencies. OR, odds ratio; CI, confidence interval.
Logistic regression for genetic and non-genetic factors.
| Variables | B |
| Exp (B) | 95% CI |
| rs3789678 | 0.216 |
| 1.241 | 1.02–1.51 |
| rs2493132 | 0.131 | 0.108 | 1.140 | 0.97–1.34 |
| rs4305 | 0.242 |
| 1.273 | 1.10–1.47 |
| rs275645 | 0.276 |
| 1.318 | 1.11–1.56 |
| rs3802230 | 0.313 |
| 1.368 | 1.08–1.74 |
| rs10086846 | 0.063 | 0.551 | 1.065 | 0.87–1.31 |
| BMI | 0.143 |
| 1.154 | 1.12–1.19 |
| TC | 0.077 | 0.149 | 1.080 | 0.97–1.20 |
| TG | 0.138 |
| 1.148 | 1.06–1.25 |
| Constant | −5.432 |
| 0.004 |
The P values of 6 SNPs were obtained from the comparison of two allele frequencies. BMI, body mass index; TC, total cholesterol; TG, triglyceride.
P value was less than 0.05.
MDR analysis of gene-environment interaction.
| Best model | TestingAccuracy | Testing Sensitivity | Testing Odds Ratio | Testing X2 | Cross-validation Consistency |
| BMI | 0.59 | 0.43 | 2.26 (95%CI: 1.20–4.27) | 6.50 ( | 10/10 |
| BMI, rs4305 | 0.60 | 0.53 | 2.32 (95%CI: 1.27–4.23) | 7.62 ( | 10/10 |
| BMI, rs275645, rs3802230 | 0.57 | 0.53 | 1.82 (95%CI: 1.01–3.29) | 3.94 ( | 5/10 |
Crossover analysis of interaction between BMI and rs4305.
| BMI | Allele | Case | Control |
| OR | 95% CI |
| <25 | G | 581 | 876 | 1 | 1 | NA |
| ≥25 | A | 300 | 172 | <0.001 | 2.63 | 2.12–3.26 |
| ≥25 | G | 460 | 270 | <0.001 | 2.57 | 2.14–3.09 |
| <25 | A | 451 | 484 | <0.001 | 1.41 | 1.19–1.66 |
The P values were obtained from the comparison of two allele frequencies. OR, odds ratio; CI, confidence interval.
Stratified analysis of interaction between BMI and rs4305.
| BMI | Group | GG | GA | AA | G | A |
| OR | 95% CI |
| <25 | Case | 160 | 261 | 95 | 581 | 451 |
| 1.41 | 1.19–1.66 |
| Control | 271 | 334 | 75 | 876 | 484 | ||||
| ≥25 | Case | 140 | 180 | 60 | 460 | 300 |
| 1.02 | 0.81–1.30 |
| Control | 77 | 116 | 28 | 270 | 172 |
The P values were obtained from the comparison of two allele frequencies. OR, odds ratio; CI, confidence interval.