Literature DB >> 24008387

ADAR-mediated RNA editing in non-coding RNA sequences.

Yun Yang1, Xinxin Zhou, Yongfeng Jin.   

Abstract

Adenosine to inosine (A-to-I) RNA editing is the most abundant editing event in animals. It converts adenosine to inosine in double-stranded RNA regions through the action of the adenosine deaminase acting on RNA (ADAR) proteins. Editing of pre-mRNA coding regions can alter the protein codon and increase functional diversity. However, most of the A-to-I editing sites occur in the non-coding regions of pre-mRNA or mRNA and non-coding RNAs. Untranslated regions (UTRs) and introns are located in pre-mRNA non-coding regions, thus A-to-I editing can influence gene expression by nuclear retention, degradation, alternative splicing, and translation regulation. Non-coding RNAs such as microRNA (miRNA), small interfering RNA (siRNA) and long non-coding RNA (lncRNA) are related to pre-mRNA splicing, translation, and gene regulation. A-to-I editing could therefore affect the stability, biogenesis, and target recognition of non-coding RNAs. Finally, it may influence the function of non-coding RNAs, resulting in regulation of gene expression. This review focuses on the function of ADAR-mediated RNA editing on mRNA non-coding regions (UTRs and introns) and non-coding RNAs (miRNA, siRNA, and lncRNA).

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Year:  2013        PMID: 24008387     DOI: 10.1007/s11427-013-4546-5

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  15 in total

1.  Noncoding regions of C. elegans mRNA undergo selective adenosine to inosine deamination and contain a small number of editing sites per transcript.

Authors:  Emily C Wheeler; Michael C Washburn; Francois Major; Douglas B Rusch; Heather A Hundley
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

2.  Splicing variants of ADAR2 and ADAR2-mediated RNA editing in glioma.

Authors:  Yao Fu; Xingli Zhao; Zhaohui Li; Jun Wei; Yu Tian
Journal:  Oncol Lett       Date:  2016-06-15       Impact factor: 2.967

3.  Adenosine Deaminase That Acts on RNA 3 (ADAR3) Binding to Glutamate Receptor Subunit B Pre-mRNA Inhibits RNA Editing in Glioblastoma.

Authors:  Eimile Oakes; Ashley Anderson; Aaron Cohen-Gadol; Heather A Hundley
Journal:  J Biol Chem       Date:  2017-02-06       Impact factor: 5.157

Review 4.  What sequencing technologies can teach us about innate immunity.

Authors:  Mays Mohammed Salih; Susan Carpenter
Journal:  Immunol Rev       Date:  2021-11-07       Impact factor: 12.988

5.  Hepatitis B virus evades immune recognition via RNA adenosine deaminase ADAR1-mediated viral RNA editing in hepatocytes.

Authors:  Liyuan Wang; Yang Sun; Xiaojia Song; Zehua Wang; Yankun Zhang; Ying Zhao; Xueqi Peng; Xiaodong Zhang; Chunyang Li; Chengjiang Gao; Nailin Li; Lifen Gao; Xiaohong Liang; Zhuanchang Wu; Chunhong Ma
Journal:  Cell Mol Immunol       Date:  2021-07-12       Impact factor: 22.096

Review 6.  Naturally occurring modified ribonucleosides.

Authors:  Phillip J McCown; Agnieszka Ruszkowska; Charlotte N Kunkler; Kurtis Breger; Jacob P Hulewicz; Matthew C Wang; Noah A Springer; Jessica A Brown
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-04-16       Impact factor: 9.349

Review 7.  Long Intergenic Non-Coding RNAs: Novel Drivers of Human Lymphocyte Differentiation.

Authors:  Ilaria Panzeri; Grazisa Rossetti; Sergio Abrignani; Massimiliano Pagani
Journal:  Front Immunol       Date:  2015-04-15       Impact factor: 7.561

8.  The domain structure and distribution of Alu elements in long noncoding RNAs and mRNAs.

Authors:  Eugene Z Kim; Adam R Wespiser; Daniel R Caffrey
Journal:  RNA       Date:  2015-12-10       Impact factor: 4.942

9.  Identification of Transposable Elements Contributing to Tissue-Specific Expression of Long Non-Coding RNAs.

Authors:  Takafumi Chishima; Junichi Iwakiri; Michiaki Hamada
Journal:  Genes (Basel)       Date:  2018-01-09       Impact factor: 4.096

Review 10.  Regulation of lncRNA expression.

Authors:  Zhuomin Wu; Xiaoxia Liu; Li Liu; Houliang Deng; Jingjing Zhang; Qian Xu; Bohong Cen; Aimin Ji
Journal:  Cell Mol Biol Lett       Date:  2014-10-13       Impact factor: 5.787

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