Literature DB >> 27446352

Splicing variants of ADAR2 and ADAR2-mediated RNA editing in glioma.

Yao Fu1, Xingli Zhao1, Zhaohui Li1, Jun Wei1, Yu Tian1.   

Abstract

The roles of alternative splicing and RNA editing in gene regulation and transcriptome diversity are well documented. Adenosine deaminases acting on RNA (ADARs) are responsible for adenosine-to-inosine (A-to-I) editing and exemplify the complex association between RNA editing and alternative splicing. The self-editing activity of ADAR2, which acts on its own pre-mRNA, leads to its alternative splicing. Alternative splicing occurs independently at nine splicing sites on ADAR2 pre-mRNA, generating numerous alternative splicing variants with various catalytic activities. A-to-I RNA editing is important in a range of physiological processes in humans and is associated with several diseases, including amyotrophic lateral sclerosis, mood disorders, epilepsy and glioma. Reduced editing at the glutamine/arginine site of the AMPA receptor subunit GluA2 in glioma, without any alteration in ADAR2 expression, is a notable phenomenon. Several studies have tried to explain this alteration in the catalytic activity of ADAR2; however, the underlying mechanism remains unclear. The present review summarizes the relevant literature and shares experimental results concerning ADAR2 alternative splicing. In particular, the present review demonstrates that shifts in the relative abundance of the active and inactive splicing variants of ADAR2 may reduce the ADAR2 editing activity in glioma. Dominant expression of ADAR2 splicing variant with low enzyme activity causes reduced RNA editing of GluA2 subunit at the glutamine/arginine site in glioma.

Entities:  

Keywords:  ADAR2; RNA editing; alternative splicing; glioma; splicing variant

Year:  2016        PMID: 27446352      PMCID: PMC4950497          DOI: 10.3892/ol.2016.4734

Source DB:  PubMed          Journal:  Oncol Lett        ISSN: 1792-1074            Impact factor:   2.967


  56 in total

1.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

2.  Molecular basis of double-stranded RNA-protein interactions: structure of a dsRNA-binding domain complexed with dsRNA.

Authors:  J M Ryter; S C Schultz
Journal:  EMBO J       Date:  1998-12-15       Impact factor: 11.598

3.  Phylogenetic comparison of the pre-mRNA adenosine deaminase ADAR2 genes and transcripts: conservation and diversity in editing site sequence and alternative splicing patterns.

Authors:  D Slavov; K Gardiner
Journal:  Gene       Date:  2002-10-16       Impact factor: 3.688

Review 4.  Functions and regulation of RNA editing by ADAR deaminases.

Authors:  Kazuko Nishikura
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

5.  Spliced segments at the 5' terminus of adenovirus 2 late mRNA.

Authors:  S M Berget; C Moore; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

6.  Loss of the imprinted snoRNA mbii-52 leads to increased 5htr2c pre-RNA editing and altered 5HT2CR-mediated behaviour.

Authors:  Christine M Doe; Dinko Relkovic; Alastair S Garfield; Jeffrey W Dalley; David E H Theobald; Trevor Humby; Lawrence S Wilkinson; Anthony R Isles
Journal:  Hum Mol Genet       Date:  2009-03-20       Impact factor: 6.150

7.  Oligophrenin-1 (OPHN1), a gene involved in X-linked intellectual disability, undergoes RNA editing and alternative splicing during human brain development.

Authors:  Sabina Barresi; Sara Tomaselli; Alekos Athanasiadis; Federica Galeano; Franco Locatelli; Enrico Bertini; Ginevra Zanni; Angela Gallo
Journal:  PLoS One       Date:  2014-03-17       Impact factor: 3.240

Review 8.  ADAR enzyme and miRNA story: a nucleotide that can make the difference.

Authors:  Sara Tomaselli; Barbara Bonamassa; Anna Alisi; Valerio Nobili; Franco Locatelli; Angela Gallo
Journal:  Int J Mol Sci       Date:  2013-11-19       Impact factor: 5.923

9.  Abnormal expression of an ADAR2 alternative splicing variant in gliomas downregulates adenosine-to-inosine RNA editing.

Authors:  Jun Wei; Zhaohui Li; Chao Du; Bin Qi; Xingli Zhao; Liping Wang; Lirong Bi; Guan Wang; Xuan Zhang; Xiaoyun Su; Yuzhuo Pan; Yu Tian
Journal:  Acta Neurochir (Wien)       Date:  2014-02-11       Impact factor: 2.216

10.  Down-regulation of RNA editing in pediatric astrocytomas: ADAR2 editing activity inhibits cell migration and proliferation.

Authors:  Caterina Cenci; Rita Barzotti; Federica Galeano; Sandro Corbelli; Rossella Rota; Luca Massimi; Concezio Di Rocco; Mary A O'Connell; Angela Gallo
Journal:  J Biol Chem       Date:  2008-01-04       Impact factor: 5.157

View more
  5 in total

1.  Inherent conformational plasticity in dsRBDs enables interaction with topologically distinct RNAs.

Authors:  Harshad Paithankar; Guneet Singh Tarang; Firdousi Parvez; Aniket Marathe; Manali Joshi; Jeetender Chugh
Journal:  Biophys J       Date:  2022-02-05       Impact factor: 4.033

2.  Conservation of A-to-I RNA editing in bowhead whale and pig.

Authors:  Knud Larsen; Mads Peter Heide-Jørgensen
Journal:  PLoS One       Date:  2021-12-09       Impact factor: 3.240

3.  Survey of the binding preferences of RNA-binding proteins to RNA editing events.

Authors:  Xiaolin Hu; Qin Zou; Li Yao; Xuerui Yang
Journal:  Genome Biol       Date:  2022-08-04       Impact factor: 17.906

Review 4.  RNA Editing-Systemic Relevance and Clue to Disease Mechanisms?

Authors:  Jochen C Meier; Svenja Kankowski; Heinz Krestel; Florian Hetsch
Journal:  Front Mol Neurosci       Date:  2016-11-23       Impact factor: 5.639

Review 5.  RNA modifications in brain tumorigenesis.

Authors:  Albert Z Huang; Alberto Delaidelli; Poul H Sorensen
Journal:  Acta Neuropathol Commun       Date:  2020-05-06       Impact factor: 7.801

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.