Literature DB >> 23991836

Cucurbit[8]uril and blue-box: high-energy water release overwhelms electrostatic interactions.

Frank Biedermann1, Michele Vendruscolo, Oren A Scherman, Alfonso De Simone, Werner M Nau.   

Abstract

The design of high-affinity and analyte-selective receptors operating in aqueous solutions is an outstanding problem in supramolecular chemistry. Directing the focus toward the unique properties of water, we present here a new strategy toward this goal and support it by molecular dynamics simulations and calorimetric measurements. We illustrate the procedure in the case of self-assembled 1:1 complexes of the rigid macrocycle cucurbit[8]uril (CB8) and dicationic auxiliary guests (AG). These CB8•AG complexes contain residual water molecules whose conformational space and hydrogen-bond formation ability is restricted by the geometrically confined and hydrophobic cavity of the receptor. We show that upon inclusion of an analyte to form a 1:1:1 CB8•AG•analyte complex, these "high-energy" cavity water molecules are released to the aqueous bulk, providing a strong enthalpic driving force to the association, and resulting in binding constants of up to 10(6) M(-1) for aromatic analytes. This binding model is supported by the measurements of large solvent and solvent isotope effects. The selectivity of the CB8•AG receptor can be modified or even switched toward small aliphatic analytes by a rational choice of the auxiliary guest, demonstrating the tunable recognition features of such self-assembled receptors. Furthermore, by comparison of the results to those for the extensively studied macrocyclic host cyclobis(paraquat-p-phenylene)--the so-called "blue-box"--it is shown that in aqueous solution the release of "high-energy" water molecules from the CB8•AG cavity can be more favorable than the use of direct host-guest interactions.

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Year:  2013        PMID: 23991836     DOI: 10.1021/ja407951x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

1.  Synthesis of a Disulfonated Derivative of Cucurbit[7]uril and Investigations of its Ability to Solubilize Insoluble Drugs.

Authors:  Elizabeth L Robinson; Peter Y Zavalij; Lyle Isaacs
Journal:  Supramol Chem       Date:  2015-05-01       Impact factor: 1.688

2.  Spontaneous drying of non-polar deep-cavity cavitand pockets in aqueous solution.

Authors:  J Wesley Barnett; Matthew R Sullivan; Joshua A Long; Du Tang; Thong Nguyen; Dor Ben-Amotz; Bruce C Gibb; Henry S Ashbaugh
Journal:  Nat Chem       Date:  2020-05-18       Impact factor: 24.427

3.  Flexibility Coexists with Shape-Persistence in Cyanostar Macrocycles.

Authors:  Yun Liu; Abhishek Singharoy; Christopher G Mayne; Arkajyoti Sengupta; Krishnan Raghavachari; Klaus Schulten; Amar H Flood
Journal:  J Am Chem Soc       Date:  2016-04-05       Impact factor: 15.419

Review 4.  Molecular Probes, Chemosensors, and Nanosensors for Optical Detection of Biorelevant Molecules and Ions in Aqueous Media and Biofluids.

Authors:  Joana Krämer; Rui Kang; Laura M Grimm; Luisa De Cola; Pierre Picchetti; Frank Biedermann
Journal:  Chem Rev       Date:  2022-01-07       Impact factor: 60.622

5.  Reversible trapping and reaction acceleration within dynamically self-assembling nanoflasks.

Authors:  Hui Zhao; Soumyo Sen; T Udayabhaskararao; Michał Sawczyk; Kristina Kučanda; Debasish Manna; Pintu K Kundu; Ji-Woong Lee; Petr Král; Rafal Klajn
Journal:  Nat Nanotechnol       Date:  2015-11-23       Impact factor: 39.213

6.  HYDROPHOBE Challenge: A Joint Experimental and Computational Study on the Host-Guest Binding of Hydrocarbons to Cucurbiturils, Allowing Explicit Evaluation of Guest Hydration Free-Energy Contributions.

Authors:  Khaleel I Assaf; Mara Florea; Jens Antony; Niel M Henriksen; Jian Yin; Andreas Hansen; Zheng-Wang Qu; Rebecca Sure; Dieter Klapstein; Michael K Gilson; Stefan Grimme; Werner M Nau
Journal:  J Phys Chem B       Date:  2017-12-01       Impact factor: 2.991

7.  Turning Cucurbit[8]uril into a Supramolecular Nanoreactor for Asymmetric Catalysis.

Authors:  Lifei Zheng; Silvia Sonzini; Masyitha Ambarwati; Edina Rosta; Oren A Scherman; Andreas Herrmann
Journal:  Angew Chem Weinheim Bergstr Ger       Date:  2015-09-07

8.  A Kinetic Self-Sorting Approach to Heterocircuit [3]Rotaxanes.

Authors:  Edward A Neal; Stephen M Goldup
Journal:  Angew Chem Int Ed Engl       Date:  2016-09-07       Impact factor: 15.336

9.  In situ SERS monitoring of photochemistry within a nanojunction reactor.

Authors:  Richard W Taylor; Roger J Coulston; Frank Biedermann; Sumeet Mahajan; Jeremy J Baumberg; Oren A Scherman
Journal:  Nano Lett       Date:  2013-11-13       Impact factor: 11.189

10.  Turning Cucurbit[8]uril into a Supramolecular Nanoreactor for Asymmetric Catalysis.

Authors:  Lifei Zheng; Silvia Sonzini; Masyitha Ambarwati; Edina Rosta; Oren A Scherman; Andreas Herrmann
Journal:  Angew Chem Int Ed Engl       Date:  2015-09-07       Impact factor: 15.336

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