Literature DB >> 23989150

Expression at 279 K, purification, crystallization and preliminary X-ray crystallographic analysis of a novel cold-active β-1,4-D-mannanase from the Antarctic springtail Cryptopygus antarcticus.

Min-Kyu Kim1, Young Jun An, Chang-Sook Jeong, Jung Min Song, Mee Hye Kang, Youn-Ho Lee, Sun-Shin Cha.   

Abstract

The CaMan gene product from Cryptopygus antarcticus, which belongs to the glycoside hydrolase family 5 type β-1,4-D-mannanases, has been crystallized using a precipitant solution consisting of 0.1 M Tris-HCl pH 8.5, 25%(w/v) polyethylene glycol 3350 by the microbatch crystallization method at 295 K. The CaMan protein crystal belonged to space group P212121, with unit-cell parameters a = 73.40, b = 83.81, c = 163.55 Å. Assuming the presence of two molecules in the asymmetric unit, the solvent content was estimated to be about 61.29%. CaMan-mannopentaose (M5) complex crystals that were isomorphous to the CaMan crystals were obtained using the same mother liquor containing 1 mM M5.

Entities:  

Keywords:  Cryptopygus antarcticus; glycoside hydrolase family 5; β-1,4-d-mannanase

Mesh:

Substances:

Year:  2013        PMID: 23989150      PMCID: PMC3758150          DOI: 10.1107/S1744309113020538

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  29 in total

1.  The three-dimensional structure of a Trichoderma reesei beta-mannanase from glycoside hydrolase family 5.

Authors:  E Sabini; H Schubert; G Murshudov; K S Wilson; M Siika-Aho; M Penttilä
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-01

2.  Crystal structure of mannanase 26A from Pseudomonas cellulosa and analysis of residues involved in substrate binding.

Authors:  D Hogg; E J Woo; D N Bolam; V A McKie; H J Gilbert; R W Pickersgill
Journal:  J Biol Chem       Date:  2001-05-29       Impact factor: 5.157

3.  Molecular cloning and characterization of a novel cold-active beta-1,4-D-mannanase from the Antarctic springtail, Cryptopygus antarcticus.

Authors:  Jung Min Song; Ki-Woong Nam; Sung Gyun Kang; Choong-Gon Kim; Suk-Tae Kwon; Youn-Ho Lee
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2008-05-18       Impact factor: 2.231

4.  Structure of β-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 Å resolution.

Authors:  Kimihiko Mizutani; Sae Tsuchiya; Mayuko Toyoda; Yuko Nanbu; Keiko Tominaga; Keizo Yuasa; Nobuyuki Takahashi; Akihiko Tsuji; Bunzo Mikami
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-25

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi.

Authors:  Jérôme Le Nours; Lars Anderson; Dominik Stoll; Henrik Stålbrand; Leila Lo Leggio
Journal:  Biochemistry       Date:  2005-09-27       Impact factor: 3.162

7.  From structure to function: insights into the catalytic substrate specificity and thermostability displayed by Bacillus subtilis mannanase BCman.

Authors:  Xiao-Xue Yan; Xiao-Min An; Lu-Lu Gui; Dong-Cai Liang
Journal:  J Mol Biol       Date:  2008-04-07       Impact factor: 5.469

8.  Improved Production of Mannanase by Streptomyces lividans.

Authors:  F Marga; C Ghakis; C Dupont; R Morosoli; D Kluepfel
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

9.  Three-dimensional crystal structure and enzymic characterization of beta-mannanase Man5A from blue mussel Mytilus edulis.

Authors:  Anna M Larsson; Lars Anderson; Bingze Xu; Inés G Muñoz; Isabel Usón; Jan-Christer Janson; Henrik Stålbrand; Jerry Ståhlberg
Journal:  J Mol Biol       Date:  2006-01-31       Impact factor: 5.469

10.  Biochemical and structural characterization of the intracellular mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel glycoside hydrolase family belonging to clan GH-A.

Authors:  Yueling Zhang; Jiansong Ju; Hao Peng; Feng Gao; Cheng Zhou; Yan Zeng; Yanfen Xue; Yin Li; Bernard Henrissat; George F Gao; Yanhe Ma
Journal:  J Biol Chem       Date:  2008-08-28       Impact factor: 5.157

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  2 in total

Review 1.  Applications of Microbial β-Mannanases.

Authors:  Aneesa Dawood; Kesen Ma
Journal:  Front Bioeng Biotechnol       Date:  2020-12-15

Review 2.  Recent advances in biotransformation, extraction and green production of D-mannose.

Authors:  Peiyao Wang; Yuting Zheng; Yanping Li; Ji Shen; Meiling Dan; Damao Wang
Journal:  Curr Res Food Sci       Date:  2021-12-16
  2 in total

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