Literature DB >> 10666621

The three-dimensional structure of a Trichoderma reesei beta-mannanase from glycoside hydrolase family 5.

E Sabini1, H Schubert, G Murshudov, K S Wilson, M Siika-Aho, M Penttilä.   

Abstract

The crystal structure of the catalytic core domain of beta-mannanase from the fungus Trichoderma reesei has been determined at a resolution of 1.5 A. The structure was solved using the anomalous scattering from a single non-isomorphous platinum complex with two heavy-metal sites in space group P2(1). The map computed with the experimental phases was enhanced by the application of an automated model building and refinement procedure using the amplitudes and experimental phases as observations. This approach is expected to be of more general application. The structure of the native enzyme and complexes with Tris-HCl and mannobiose are also reported: the mannobiose binds in subsites +1 and +2. The structure is briefly compared with that of the homologous beta-mannanase from the bacterium Thermomonospora fusca.

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Year:  2000        PMID: 10666621     DOI: 10.1107/s0907444999013943

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  33 in total

1.  Tracing determinants of dual substrate specificity in glycoside hydrolase family 5.

Authors:  Zhiwei Chen; Gregory D Friedland; Jose H Pereira; Sonia A Reveco; Rosa Chan; Joshua I Park; Michael P Thelen; Paul D Adams; Adam P Arkin; Jay D Keasling; Harvey W Blanch; Blake A Simmons; Kenneth L Sale; Dylan Chivian; Swapnil R Chhabra
Journal:  J Biol Chem       Date:  2012-05-29       Impact factor: 5.157

2.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction studies of the catalytic domain of a hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1.

Authors:  Camila Ramos Santos; Fabio Marcio Squina; Andreia Meza Navarro; Roberto Ruller; Rolf Prade; Mario Tyago Murakami
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-08-26

3.  Three-dimensional structure of RBcel1, a metagenome-derived psychrotolerant family GH5 endoglucanase.

Authors:  Maud Delsaute; Renaud Berlemont; Dominique Dehareng; Dany Van Elder; Moreno Galleni; Cédric Bauvois
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-26

Review 4.  Genomics review of holocellulose deconstruction by aspergilli.

Authors:  Fernando Segato; André R L Damásio; Rosymar C de Lucas; Fabio M Squina; Rolf A Prade
Journal:  Microbiol Mol Biol Rev       Date:  2014-12       Impact factor: 11.056

5.  Structure of β-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 Å resolution.

Authors:  Kimihiko Mizutani; Sae Tsuchiya; Mayuko Toyoda; Yuko Nanbu; Keiko Tominaga; Keizo Yuasa; Nobuyuki Takahashi; Akihiko Tsuji; Bunzo Mikami
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-25

6.  Expression and characterization of a Bifidobacterium adolescentis beta-mannanase carrying mannan-binding and cell association motifs.

Authors:  Evelina Kulcinskaja; Anna Rosengren; Romany Ibrahim; Katarína Kolenová; Henrik Stålbrand
Journal:  Appl Environ Microbiol       Date:  2012-10-12       Impact factor: 4.792

7.  Functional analysis of the degradation of cellulosic substrates by a Chaetomium globosum endophytic isolate.

Authors:  Paolo Longoni; Marinella Rodolfi; Laura Pantaleoni; Enrico Doria; Lorenzo Concia; Anna Maria Picco; Rino Cella
Journal:  Appl Environ Microbiol       Date:  2012-03-02       Impact factor: 4.792

8.  Directed modification of the Aspergillus usamii β-mannanase to improve its substrate affinity by in silico design and site-directed mutagenesis.

Authors:  Jianfang Li; Xihuan Wei; Cunduo Tang; Junqing Wang; Mei Zhao; Qingfeng Pang; Minchen Wu
Journal:  J Ind Microbiol Biotechnol       Date:  2014-02-04       Impact factor: 3.346

9.  Molecular cloning and expression in Escherichia coli of a Trichoderma viride endo-beta-(1-->6)-galactanase gene.

Authors:  Toshihisa Kotake; Satoshi Kaneko; Aya Kubomoto; Md Ashraful Haque; Hideyuki Kobayashi; Yoichi Tsumuraya
Journal:  Biochem J       Date:  2004-02-01       Impact factor: 3.857

10.  Cloning, expression in Pichia pastoris, and characterization of a thermostable GH5 mannan endo-1,4-beta-mannosidase from Aspergillus niger BK01.

Authors:  Bien-Cuong Do; Thi-Thu Dang; Jean-Guy Berrin; Dietmar Haltrich; Kim-Anh To; Jean-Claude Sigoillot; Montarop Yamabhai
Journal:  Microb Cell Fact       Date:  2009-11-13       Impact factor: 5.328

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