Literature DB >> 23971632

Fluorescent proteins in cellular organelles: serious pitfalls and some solutions.

Lindsey M Costantini1, Erik Lee Snapp.   

Abstract

Fluorescent proteins (FPs) have been powerful tools for cell biologists for over 15 years. The large variety of FPs available rarely comes with an instruction manual or a warning label. The potential pitfalls of the use of FPs in cellular organelles represent a significant concern for investigators. FPs generally did not evolve in the often distinctive physicochemical environments of subcellular organelles. In organelles, FPs can misfold, go dark, and even distort organelle morphology. In this minireview, we describe the issues associated with FPs in organelles and provide solutions to enable investigators to better exploit FP technology in cells.

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Year:  2013        PMID: 23971632      PMCID: PMC3806368          DOI: 10.1089/dna.2013.2172

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  40 in total

1.  Dynamics and retention of misfolded proteins in native ER membranes.

Authors:  S Nehls; E L Snapp; N B Cole; K J Zaal; A K Kenworthy; T H Roberts; J Ellenberg; J F Presley; E Siggia; J Lippincott-Schwartz
Journal:  Nat Cell Biol       Date:  2000-05       Impact factor: 28.824

2.  Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells.

Authors:  David A Zacharias; Jonathan D Violin; Alexandra C Newton; Roger Y Tsien
Journal:  Science       Date:  2002-05-03       Impact factor: 47.728

3.  A strategy for the generation of non-aggregating mutants of Anthozoa fluorescent proteins.

Authors:  Yurii G Yanushevich; Dmitry B Staroverov; Alexander P Savitsky; Arkady F Fradkov; Nadya G Gurskaya; Maria E Bulina; Konstantin A Lukyanov; Sergey A Lukyanov
Journal:  FEBS Lett       Date:  2002-01-30       Impact factor: 4.124

4.  A monomeric red fluorescent protein.

Authors:  Robert E Campbell; Oded Tour; Amy E Palmer; Paul A Steinbach; Geoffrey S Baird; David A Zacharias; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

5.  Genetically encoded indicators of cellular calcium dynamics based on troponin C and green fluorescent protein.

Authors:  Nicola Heim; Oliver Griesbeck
Journal:  J Biol Chem       Date:  2004-01-24       Impact factor: 5.157

6.  An improved cyan fluorescent protein variant useful for FRET.

Authors:  Mark A Rizzo; Gerald H Springer; Butch Granada; David W Piston
Journal:  Nat Biotechnol       Date:  2004-02-29       Impact factor: 54.908

7.  A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications.

Authors:  Takeharu Nagai; Keiji Ibata; Eun Sun Park; Mie Kubota; Katsuhiko Mikoshiba; Atsushi Miyawaki
Journal:  Nat Biotechnol       Date:  2002-01       Impact factor: 54.908

8.  Oligomerization of green fluorescent protein in the secretory pathway of endocrine cells.

Authors:  R K Jain; P B Joyce; M Molinete; P A Halban; S U Gorr
Journal:  Biochem J       Date:  2001-12-15       Impact factor: 3.857

9.  Reducing the environmental sensitivity of yellow fluorescent protein. Mechanism and applications.

Authors:  O Griesbeck; G S Baird; R E Campbell; D A Zacharias; R Y Tsien
Journal:  J Biol Chem       Date:  2001-05-31       Impact factor: 5.157

10.  Formation of stacked ER cisternae by low affinity protein interactions.

Authors:  Erik L Snapp; Ramanujan S Hegde; Maura Francolini; Francesca Lombardo; Sara Colombo; Emanuela Pedrazzini; Nica Borgese; Jennifer Lippincott-Schwartz
Journal:  J Cell Biol       Date:  2003-10-27       Impact factor: 10.539

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  23 in total

Review 1.  Going Viral with Fluorescent Proteins.

Authors:  Lindsey M Costantini; Erik L Snapp
Journal:  J Virol       Date:  2015-07-22       Impact factor: 5.103

2.  VIPER is a genetically encoded peptide tag for fluorescence and electron microscopy.

Authors:  Julia K Doh; Jonathan D White; Hannah K Zane; Young Hwan Chang; Claudia S López; Caroline A Enns; Kimberly E Beatty
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-05       Impact factor: 11.205

3.  A New Tool for Inducible Gene Expression in Caenorhabditis elegans.

Authors:  Gabriela C Monsalve; Keith R Yamamoto; Jordan D Ward
Journal:  Genetics       Date:  2018-11-30       Impact factor: 4.562

4.  Advances in Confocal Microscopy and Selected Applications.

Authors:  W Matt Reilly; Christopher J Obara
Journal:  Methods Mol Biol       Date:  2021

5.  Dissecting the Cell Entry Pathway of Baculovirus by Single-Particle Tracking and Quantitative Electron Microscopic Analysis.

Authors:  Fujun Qin; Congrui Xu; Jia Hu; Chengfeng Lei; Zhenhua Zheng; Ke Peng; Hanzhong Wang; Xiulian Sun
Journal:  J Virol       Date:  2019-04-03       Impact factor: 5.103

Review 6.  Molecular Pharmacology of δ-Opioid Receptors.

Authors:  Louis Gendron; Catherine M Cahill; Mark von Zastrow; Peter W Schiller; Graciela Pineyro
Journal:  Pharmacol Rev       Date:  2016-07       Impact factor: 25.468

7.  moxDendra2: an inert photoswitchable protein for oxidizing environments.

Authors:  Andrii A Kaberniuk; Nicholas C Morano; Vladislav V Verkhusha; Erik Lee Snapp
Journal:  Chem Commun (Camb)       Date:  2017-02-09       Impact factor: 6.222

Review 8.  Subcellular functions of proteins under fluorescence single-cell microscopy.

Authors:  Casey L Kohnhorst; Danielle L Schmitt; Anand Sundaram; Songon An
Journal:  Biochim Biophys Acta       Date:  2015-05-27

Review 9.  Advances in fluorescence labeling strategies for dynamic cellular imaging.

Authors:  Kevin M Dean; Amy E Palmer
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

10.  VIPERnano: Improved Live Cell Intracellular Protein Tracking.

Authors:  Erin Morgan; Julia Doh; Kimberly Beatty; Norbert Reich
Journal:  ACS Appl Mater Interfaces       Date:  2019-10-01       Impact factor: 9.229

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