Literature DB >> 14742421

Genetically encoded indicators of cellular calcium dynamics based on troponin C and green fluorescent protein.

Nicola Heim1, Oliver Griesbeck.   

Abstract

Genetic calcium probes offer tremendous potential in the fields of neuroscience, cell biology, and pharmaceutical screening. Previously, ratiometric and non-ratiometric indicators of cellular calcium dynamics have been described that consist of mutants of the green fluorescent protein (GFP) as fluorophores and calmodulin as calcium-binding moiety in several configurations. However, these calmodulin-based types of probes have a series of deficiencies, such as reduced dynamic ranges, when expressed within transgenic organisms and lack of calcium sensitivity in certain targetings. We developed novel types of calcium probes based on troponin C variants from skeletal and cardiac muscle. These indicators have ratio changes up to 140%, K(d)s ranging from 470 nm to 29 microm, and improved subcellular targeting properties. We targeted the indicators to the plasma membrane of HEK293 cells and primary hippocampal neurons. Upon long lasting depolarization, submembrane calcium levels in hippocampal neurons were found to be in equilibrium with bulk cytosolic calcium levels, suggesting no standing gradient persists from the membrane toward the cytosol. We expect that such novel indicators using specialized calcium sensing proteins will be minimally interacting with the cellular biochemical machinery.

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Year:  2004        PMID: 14742421     DOI: 10.1074/jbc.M312751200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  90 in total

1.  Optically monitoring voltage in neurons by photo-induced electron transfer through molecular wires.

Authors:  Evan W Miller; John Y Lin; E Paxon Frady; Paul A Steinbach; William B Kristan; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-24       Impact factor: 11.205

2.  Correlating calcium binding, Förster resonance energy transfer, and conformational change in the biosensor TN-XXL.

Authors:  Anselm Geiger; Luigi Russo; Thomas Gensch; Thomas Thestrup; Stefan Becker; Karl-Peter Hopfner; Christian Griesinger; Gregor Witte; Oliver Griesbeck
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

3.  Genetically encoded probes for measurement of intracellular calcium.

Authors:  Michael Whitaker
Journal:  Methods Cell Biol       Date:  2010       Impact factor: 1.441

Review 4.  Shining light on signaling and metabolic networks by genetically encoded biosensors.

Authors:  Sylvie Lalonde; David W Ehrhardt; Wolf B Frommer
Journal:  Curr Opin Plant Biol       Date:  2005-09-26       Impact factor: 7.834

5.  In vivo performance of genetically encoded indicators of neural activity in flies.

Authors:  Dierk F Reiff; Alexandra Ihring; Giovanna Guerrero; Ehud Y Isacoff; Maximilian Joesch; Junichi Nakai; Alexander Borst
Journal:  J Neurosci       Date:  2005-05-11       Impact factor: 6.167

6.  A FRET-based calcium biosensor with fast signal kinetics and high fluorescence change.

Authors:  Marco Mank; Dierk F Reiff; Nicola Heim; Michael W Friedrich; Alexander Borst; Oliver Griesbeck
Journal:  Biophys J       Date:  2005-12-09       Impact factor: 4.033

Review 7.  Genetically encoded Ca2+ indicators: using genetics and molecular design to understand complex physiology.

Authors:  Michael I Kotlikoff
Journal:  J Physiol       Date:  2006-10-12       Impact factor: 5.182

Review 8.  Reporting from the field: genetically encoded fluorescent reporters uncover signaling dynamics in living biological systems.

Authors:  Sohum Mehta; Jin Zhang
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

Review 9.  Visualizing circuits and systems using transgenic reporters of neural activity.

Authors:  Alison L Barth
Journal:  Curr Opin Neurobiol       Date:  2007-11-26       Impact factor: 6.627

Review 10.  Genetic dissection of neural circuits.

Authors:  Liqun Luo; Edward M Callaway; Karel Svoboda
Journal:  Neuron       Date:  2008-03-13       Impact factor: 17.173

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