Literature DB >> 23953976

Successes and challenges of using whole exome sequencing to identify novel genes underlying an inherited predisposition for thoracic aortic aneurysms and acute aortic dissections.

Dianna M Milewicz1, Ellen S Regalado2, Jay Shendure3, Deborah A Nickerson3, Dong-chuan Guo2.   

Abstract

Thoracic aortic aneurysms involving the aortic root and/or ascending aorta can lead to acute aortic dissections. Approximately 20% of patients with thoracic aortic aneurysms and dissections (TAAD) have a family history of the disease, referred to as familial TAAD (FTAAD) that can be inherited in an autosomal dominant manner with variable expression with respect to disease presentation, age of onset and associated features. Whole exome sequencing (WES) has been used to identify causative mutations in novel genes for TAAD. The strategy used to reduce the large number of rare variants identified using WES is to sequence distant relatives with TAAD and filter for heterozygous rare variants that are shared between the relatives, predicted to disrupt protein function and segregate with the TAAD phenotype in other family members. Putative genes are validated by identifying additional families with a causative mutation in the genes. This approach has successfully identified novel genes for FTAAD. Published by Elsevier Inc.

Entities:  

Mesh:

Year:  2013        PMID: 23953976      PMCID: PMC3917689          DOI: 10.1016/j.tcm.2013.06.004

Source DB:  PubMed          Journal:  Trends Cardiovasc Med        ISSN: 1050-1738            Impact factor:   6.677


  43 in total

1.  Autosomal dominant inheritance of a predisposition to thoracic aortic aneurysms and dissections and intracranial saccular aneurysms.

Authors:  Ellen Regalado; Sarah Medrek; Van Tran-Fadulu; Dong-Chuan Guo; Hariyadarshi Pannu; Hossein Golabbakhsh; Suzanne Smart; Julia H Chen; Sanjay Shete; Dong H Kim; Ralph Stern; Alan C Braverman; Dianna M Milewicz
Journal:  Am J Med Genet A       Date:  2011-08-03       Impact factor: 2.802

2.  TGFBR2 mutations alter smooth muscle cell phenotype and predispose to thoracic aortic aneurysms and dissections.

Authors:  Sakiko Inamoto; Callie S Kwartler; Andrea L Lafont; Yao Yun Liang; Van Tran Fadulu; Senthil Duraisamy; Marcia Willing; Anthony Estrera; Hazim Safi; Mark C Hannibal; John Carey; John Wiktorowicz; Filemon K Tan; Xin-Hua Feng; Hariyadarshi Pannu; Dianna M Milewicz
Journal:  Cardiovasc Res       Date:  2010-07-13       Impact factor: 10.787

3.  Mutations in myosin light chain kinase cause familial aortic dissections.

Authors:  Li Wang; Dong-chuan Guo; Jiumei Cao; Limin Gong; Kristine E Kamm; Ellen Regalado; Li Li; Sanjay Shete; Wei-Qi He; Min-Sheng Zhu; Stephan Offermanns; Dawna Gilchrist; John Elefteriades; James T Stull; Dianna M Milewicz
Journal:  Am J Hum Genet       Date:  2010-11-04       Impact factor: 11.025

4.  Familial thoracic aortic aneurysms and dissections: identification of a novel locus for stable aneurysms with a low risk for progression to aortic dissection.

Authors:  Dong-Chuan Guo; Ellen S Regalado; Charles Minn; Van Tran-Fadulu; Joshua Coney; Jiumei Cao; Min Wang; Robert K Yu; Anthony L Estrera; Hazim J Safi; Sanjay S Shete; Dianna M Milewicz
Journal:  Circ Cardiovasc Genet       Date:  2010-12-16

5.  Mutations in SMAD3 cause a syndromic form of aortic aneurysms and dissections with early-onset osteoarthritis.

Authors:  Ingrid M B H van de Laar; Rogier A Oldenburg; Gerard Pals; Jolien W Roos-Hesselink; Bianca M de Graaf; Judith M A Verhagen; Yvonne M Hoedemaekers; Rob Willemsen; Lies-Anne Severijnen; Hanka Venselaar; Gert Vriend; Peter M Pattynama; Margriet Collée; Danielle Majoor-Krakauer; Don Poldermans; Ingrid M E Frohn-Mulder; Dimitra Micha; Janneke Timmermans; Yvonne Hilhorst-Hofstee; Sita M Bierma-Zeinstra; Patrick J Willems; Johan M Kros; Edwin H G Oei; Ben A Oostra; Marja W Wessels; Aida M Bertoli-Avella
Journal:  Nat Genet       Date:  2011-01-09       Impact factor: 38.330

6.  Exome sequencing identifies SMAD3 mutations as a cause of familial thoracic aortic aneurysm and dissection with intracranial and other arterial aneurysms.

Authors:  Ellen S Regalado; Dong-Chuan Guo; Carlos Villamizar; Nili Avidan; Dawna Gilchrist; Barbara McGillivray; Lorne Clarke; Francois Bernier; Regie L Santos-Cortez; Suzanne M Leal; Aida M Bertoli-Avella; Jay Shendure; Mark J Rieder; Deborah A Nickerson; Dianna M Milewicz
Journal:  Circ Res       Date:  2011-07-21       Impact factor: 17.367

7.  Mutations in smooth muscle alpha-actin (ACTA2) cause coronary artery disease, stroke, and Moyamoya disease, along with thoracic aortic disease.

Authors:  Dong-Chuan Guo; Christina L Papke; Van Tran-Fadulu; Ellen S Regalado; Nili Avidan; Ralph Jay Johnson; Dong H Kim; Hariyadarshi Pannu; Marcia C Willing; Elizabeth Sparks; Reed E Pyeritz; Michael N Singh; Ronald L Dalman; James C Grotta; Ali J Marian; Eric A Boerwinkle; Lorraine Q Frazier; Scott A LeMaire; Joseph S Coselli; Anthony L Estrera; Hazim J Safi; Sudha Veeraraghavan; Donna M Muzny; David A Wheeler; James T Willerson; Robert K Yu; Sanjay S Shete; Steven E Scherer; C S Raman; L Maximilian Buja; Dianna M Milewicz
Journal:  Am J Hum Genet       Date:  2009-04-30       Impact factor: 11.025

8.  Signaling processes for initiating smooth muscle contraction upon neural stimulation.

Authors:  Hai-Lei Ding; Jeffrey W Ryder; James T Stull; Kristine E Kamm
Journal:  J Biol Chem       Date:  2009-04-06       Impact factor: 5.157

9.  Recurrent chromosome 16p13.1 duplications are a risk factor for aortic dissections.

Authors:  Shao-Qing Kuang; Dong-Chuan Guo; Siddharth K Prakash; Merry-Lynn N McDonald; Ralph J Johnson; Min Wang; Ellen S Regalado; Ludivine Russell; Jiu-Mei Cao; Callie Kwartler; Kurt Fraivillig; Joseph S Coselli; Hazim J Safi; Anthony L Estrera; Suzanne M Leal; Scott A LeMaire; John W Belmont; Dianna M Milewicz
Journal:  PLoS Genet       Date:  2011-06-16       Impact factor: 5.917

10.  Targeted capture and massively parallel sequencing of 12 human exomes.

Authors:  Sarah B Ng; Emily H Turner; Peggy D Robertson; Steven D Flygare; Abigail W Bigham; Choli Lee; Tristan Shaffer; Michelle Wong; Arindam Bhattacharjee; Evan E Eichler; Michael Bamshad; Deborah A Nickerson; Jay Shendure
Journal:  Nature       Date:  2009-08-16       Impact factor: 49.962

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  17 in total

Review 1.  Epigenetic influences on genetically triggered thoracic aortic aneurysm.

Authors:  Stefanie S Portelli; Elizabeth N Robertson; Cassandra Malecki; Kiersten A Liddy; Brett D Hambly; Richmond W Jeremy
Journal:  Biophys Rev       Date:  2018-09-28

2.  Analysis of the contribution of 129 candidate genes to thoracic aortic aneurysm or dissection of a mixed cohort of sporadic and familial cases in South China.

Authors:  Ying Li; Miaoxian Fang; Jue Yang; Changjiang Yu; Juntao Kuang; Tucheng Sun; Ruixin Fan
Journal:  Am J Transl Res       Date:  2021-05-15       Impact factor: 4.060

3.  MMP17/MT4-MMP and thoracic aortic aneurysms: OPNing new potential for effective treatment.

Authors:  Christina L Papke; Yoshito Yamashiro; Hiromi Yanagisawa
Journal:  Circ Res       Date:  2015-07-03       Impact factor: 17.367

4.  Clinically relevant variants identified in thoracic aortic aneurysm patients by research exome sequencing.

Authors:  Jeffrey A Schubert; Benjamin J Landis; Amy R Shikany; Robert B Hinton; Stephanie M Ware
Journal:  Am J Med Genet A       Date:  2016-02-07       Impact factor: 2.802

5.  FOXE3 mutations predispose to thoracic aortic aneurysms and dissections.

Authors:  Shao-Qing Kuang; Olga Medina-Martinez; Dong-Chuan Guo; Limin Gong; Ellen S Regalado; Corey L Reynolds; Catherine Boileau; Guillaume Jondeau; Siddharth K Prakash; Callie S Kwartler; Lawrence Yang Zhu; Andrew M Peters; Xue-Yan Duan; Michael J Bamshad; Jay Shendure; Debbie A Nickerson; Regie L Santos-Cortez; Xiurong Dong; Suzanne M Leal; Mark W Majesky; Eric C Swindell; Milan Jamrich; Dianna M Milewicz
Journal:  J Clin Invest       Date:  2016-02-08       Impact factor: 14.808

6.  MAT2A mutations predispose individuals to thoracic aortic aneurysms.

Authors:  Dong-chuan Guo; Limin Gong; Ellen S Regalado; Regie L Santos-Cortez; Ren Zhao; Bo Cai; Sudha Veeraraghavan; Siddharth K Prakash; Ralph J Johnson; Ann Muilenburg; Marcia Willing; Guillaume Jondeau; Catherine Boileau; Hariyadarshi Pannu; Rocio Moran; Julie Debacker; Michael J Bamshad; Jay Shendure; Deborah A Nickerson; Suzanne M Leal; C S Raman; Eric C Swindell; Dianna M Milewicz
Journal:  Am J Hum Genet       Date:  2014-12-31       Impact factor: 11.025

Review 7.  Genetics and mechanisms of thoracic aortic disease.

Authors:  Elizabeth Chou; James P Pirruccello; Patrick T Ellinor; Mark E Lindsay
Journal:  Nat Rev Cardiol       Date:  2022-09-21       Impact factor: 49.421

8.  Human SMAD4 Genomic Variants Identified in Individuals with Heritable and Early-Onset Thoracic Aortic Disease.

Authors:  Shreyas A Bhave; Dong-Chuan Guo; Stoyan Angelov; Michael J Bamshad; Deborah A Nickerson; Dianna Milewicz; Mary C Wallingford
Journal:  Cardiogenetics       Date:  2021-08-18

9.  [Gene mutation analysis of 19 Uighur families with aortic disease in Kashgar, China].

Authors:  Changjiang Yu; Ying Li; Abuduresuli Adilijang; Jizhong Yan; Arkin Guzalnur; Abudula Abudushalamu; Yimamu Aimirela; Ruixin Fan
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2020-11-30

Review 10.  Management of Women With Congenital or Inherited Cardiovascular Disease From Pre-Conception Through Pregnancy and Postpartum: JACC Focus Seminar 2/5.

Authors:  Kathryn J Lindley; C Noel Bairey Merz; Anita W Asgar; Natalie A Bello; Sonal Chandra; Melinda B Davis; Mardi Gomberg-Maitland; Martha Gulati; Lisa M Hollier; Eric V Krieger; Ki Park; Candice Silversides; Natasha K Wolfe; Carl J Pepine
Journal:  J Am Coll Cardiol       Date:  2021-04-13       Impact factor: 24.094

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