Literature DB >> 36158166

Human SMAD4 Genomic Variants Identified in Individuals with Heritable and Early-Onset Thoracic Aortic Disease.

Shreyas A Bhave1, Dong-Chuan Guo2, Stoyan Angelov3, Michael J Bamshad4, Deborah A Nickerson4, Dianna Milewicz2, Mary C Wallingford1,5.   

Abstract

Thoracic aortic aneurysms (TAAs) that progress to acute thoracic aortic dissections (TADs) are life threatening vascular events that have been associated with altered transforming growth factor (TGF) β signaling. In addition to TAA, multiple genetic vascular disorders, including hereditary hemorrhagic telangiectasia (HHT), involve altered TGFβ signaling and vascular malformations. Due to the importance of TGFβ, genomic variant databases have been curated for activin receptor-like kinase 1 (ALK1) and endoglin (ENG). This case report details seven variants in SMAD4 that are associated with either heritable or early onset aortic dissections and compares them to pathogenic exon variants in gnomAD v2.1.1. The TAA and TAD variants were identified through whole exome sequencing of 346 unrelated heritable thoracic aortic disease (HTAD) and 355 individuals of early onset (age ≤ 56 years old) of thoracic aortic dissection (ESTAD). An allele frequency filter of less than 0.05% was applied in the Genome Aggregation Database (gnomAD exome v2.1.1) with a combined annotation dependent depletion score (CADD) greater than 20. These seven variants also have a higher REVEL score (>0.2), indicating pathogenic potential. Further in vivo and in vitro analysis is needed to evaluate how these variants affect mRNA stability and SMAD4 protein activity in association with thoracic aortic disease.

Entities:  

Keywords:  SMAD4; genomic variants; hereditary hemorrhagic telangiectasia; thoracic aortic aneurysm; vascular malformations

Year:  2021        PMID: 36158166      PMCID: PMC9495981          DOI: 10.3390/cardiogenetics11030015

Source DB:  PubMed          Journal:  Cardiogenetics        ISSN: 2035-8148


  27 in total

1.  SMAD4 rare variants in individuals and families with thoracic aortic aneurysms and dissections.

Authors:  Xue-Yan Duan; Dong-Chuan Guo; Ellen S Regalado; Hong Shen; Joseph S Coselli; Anthony L Estrera; Hazim J Safi; Michael J Bamshad; Deborah A Nickerson; Scott A LeMaire; Julie De Backer; Dianna M Milewicz
Journal:  Eur J Hum Genet       Date:  2019-02-26       Impact factor: 4.246

2.  Essential role of endothelial Smad4 in vascular remodeling and integrity.

Authors:  Yu Lan; Bing Liu; Huiyu Yao; Fangfei Li; Tujun Weng; Guan Yang; Wenlong Li; Xuan Cheng; Ning Mao; Xiao Yang
Journal:  Mol Cell Biol       Date:  2007-08-27       Impact factor: 4.272

3.  Angiopoietin-2 Inhibition Rescues Arteriovenous Malformation in a Smad4 Hereditary Hemorrhagic Telangiectasia Mouse Model.

Authors:  Angela M Crist; Xingyan Zhou; Jone Garai; Amanda R Lee; Janina Thoele; Christoph Ullmer; Christian Klein; Jovanny Zabaleta; Stryder M Meadows
Journal:  Circulation       Date:  2019-04-23       Impact factor: 29.690

4.  Genome-wide association study identifies a susceptibility locus for thoracic aortic aneurysms and aortic dissections spanning FBN1 at 15q21.1.

Authors:  Scott A LeMaire; Merry-Lynn N McDonald; Dong-Chuan Guo; Ludivine Russell; Charles C Miller; Ralph J Johnson; Mir Reza Bekheirnia; Luis M Franco; Mary Nguyen; Reed E Pyeritz; Joseph E Bavaria; Richard Devereux; Cheryl Maslen; Kathryn W Holmes; Kim Eagle; Simon C Body; Christine Seidman; J G Seidman; Eric M Isselbacher; Molly Bray; Joseph S Coselli; Anthony L Estrera; Hazim J Safi; John W Belmont; Suzanne M Leal; Dianna M Milewicz
Journal:  Nat Genet       Date:  2011-09-11       Impact factor: 38.330

5.  Clinical Validity of Genes for Heritable Thoracic Aortic Aneurysm and Dissection.

Authors:  Marjolijn Renard; Catherine Francis; Rajarshi Ghosh; Alan F Scott; P Dane Witmer; Lesley C Adès; Gregor U Andelfinger; Pauline Arnaud; Catherine Boileau; Bert L Callewaert; Dongchuan Guo; Nadine Hanna; Mark E Lindsay; Hiroko Morisaki; Takayuki Morisaki; Nicholas Pachter; Leema Robert; Lut Van Laer; Harry C Dietz; Bart L Loeys; Dianna M Milewicz; Julie De Backer
Journal:  J Am Coll Cardiol       Date:  2018-08-07       Impact factor: 24.094

6.  Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-beta effectors.

Authors:  Nithya BabuRajendran; Paaventhan Palasingam; Kamesh Narasimhan; Wenjie Sun; Shyam Prabhakar; Ralf Jauch; Prasanna R Kolatkar
Journal:  Nucleic Acids Res       Date:  2010-02-10       Impact factor: 16.971

7.  TGFB2 mutations cause familial thoracic aortic aneurysms and dissections associated with mild systemic features of Marfan syndrome.

Authors:  Catherine Boileau; Dong-Chuan Guo; Nadine Hanna; Ellen S Regalado; Delphine Detaint; Limin Gong; Mathilde Varret; Siddharth K Prakash; Alexander H Li; Hyacintha d'Indy; Alan C Braverman; Bernard Grandchamp; Callie S Kwartler; Laurent Gouya; Regie Lyn P Santos-Cortez; Marianne Abifadel; Suzanne M Leal; Christine Muti; Jay Shendure; Marie-Sylvie Gross; Mark J Rieder; Alec Vahanian; Deborah A Nickerson; Jean Baptiste Michel; Guillaume Jondeau; Dianna M Milewicz
Journal:  Nat Genet       Date:  2012-07-08       Impact factor: 38.330

8.  Current HHT genetic overview in Spain and its phenotypic correlation: data from RiHHTa registry.

Authors:  Rosario Sánchez-Martínez; Adriana Iriarte; José María Mora-Luján; José Luis Patier; Daniel López-Wolf; Ana Ojeda; Miguel Angel Torralba; María Coloma Juyol; Ricardo Gil; Sol Añón; Joel Salazar-Mendiguchía; Antoni Riera-Mestre
Journal:  Orphanet J Rare Dis       Date:  2020-06-05       Impact factor: 4.123

Review 9.  The role of TGF-β/SMAD4 signaling in cancer.

Authors:  Ming Zhao; Lopa Mishra; Chu-Xia Deng
Journal:  Int J Biol Sci       Date:  2018-01-12       Impact factor: 6.580

10.  The mutational constraint spectrum quantified from variation in 141,456 humans.

Authors:  Konrad J Karczewski; Laurent C Francioli; Grace Tiao; Beryl B Cummings; Jessica Alföldi; Qingbo Wang; Ryan L Collins; Kristen M Laricchia; Andrea Ganna; Daniel P Birnbaum; Laura D Gauthier; Harrison Brand; Matthew Solomonson; Nicholas A Watts; Daniel Rhodes; Moriel Singer-Berk; Eleina M England; Eleanor G Seaby; Jack A Kosmicki; Raymond K Walters; Katherine Tashman; Yossi Farjoun; Eric Banks; Timothy Poterba; Arcturus Wang; Cotton Seed; Nicola Whiffin; Jessica X Chong; Kaitlin E Samocha; Emma Pierce-Hoffman; Zachary Zappala; Anne H O'Donnell-Luria; Eric Vallabh Minikel; Ben Weisburd; Monkol Lek; James S Ware; Christopher Vittal; Irina M Armean; Louis Bergelson; Kristian Cibulskis; Kristen M Connolly; Miguel Covarrubias; Stacey Donnelly; Steven Ferriera; Stacey Gabriel; Jeff Gentry; Namrata Gupta; Thibault Jeandet; Diane Kaplan; Christopher Llanwarne; Ruchi Munshi; Sam Novod; Nikelle Petrillo; David Roazen; Valentin Ruano-Rubio; Andrea Saltzman; Molly Schleicher; Jose Soto; Kathleen Tibbetts; Charlotte Tolonen; Gordon Wade; Michael E Talkowski; Benjamin M Neale; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2020-05-27       Impact factor: 69.504

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