Literature DB >> 11743024

RNAi is antagonized by A-->I hyper-editing.

A D Scadden1, C W Smith.   

Abstract

RNA interference (RNAi) and adenosine to inosine conversion are both mechanisms that respond to double-stranded RNA (dsRNA) and have been suggested to have antiviral roles. RNAi involves processing of dsRNA to short interfering RNAs (siRNAs), which subsequently mediate degradation of the cognate mRNAs. Deamination of adenosines changes the coding capacity of the RNA, as inosine is decoded as guanosine, and alters the structure because A-U base pairs are replaced by I*U wobble pairs. Here we show that RNAi is inhibited if the triggering dsRNA is first deaminated by ADAR2. Moreover, we show that production of siRNAs is progressively inhibited with increasing deamination and that this is sufficient to explain the inhibition of RNAi upon hyper-editing of dsRNAs.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11743024      PMCID: PMC1084162          DOI: 10.1093/embo-reports/kve244

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  24 in total

1.  A species of small antisense RNA in posttranscriptional gene silencing in plants.

Authors:  A J Hamilton; D C Baulcombe
Journal:  Science       Date:  1999-10-29       Impact factor: 47.728

2.  Targeted mRNA degradation by double-stranded RNA in vitro.

Authors:  T Tuschl; P D Zamore; R Lehmann; D P Bartel; P A Sharp
Journal:  Genes Dev       Date:  1999-12-15       Impact factor: 11.361

3.  The fate of dsRNA in the nucleus: a p54(nrb)-containing complex mediates the nuclear retention of promiscuously A-to-I edited RNAs.

Authors:  Z Zhang; G G Carmichael
Journal:  Cell       Date:  2001-08-24       Impact factor: 41.582

4.  Protein-nucleic acid interactions and cellular responses to interferon.

Authors:  C E Samuel
Journal:  Methods       Date:  1998-07       Impact factor: 3.608

5.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

6.  A ribonuclease specific for inosine-containing RNA: a potential role in antiviral defence?

Authors:  A D Scadden; C W Smith
Journal:  EMBO J       Date:  1997-04-15       Impact factor: 11.598

Review 7.  Chromatin assembly extracts from Drosophila embryos.

Authors:  P B Becker; T Tsukiyama; C Wu
Journal:  Methods Cell Biol       Date:  1994       Impact factor: 1.441

8.  Purification and properties of double-stranded RNA-specific adenosine deaminase from calf thymus.

Authors:  M A O'Connell; W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

9.  A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans.

Authors:  S W Knight; B L Bass
Journal:  Science       Date:  2001-08-02       Impact factor: 47.728

10.  Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: evidence for two forms of the deaminase.

Authors:  J B Patterson; C E Samuel
Journal:  Mol Cell Biol       Date:  1995-10       Impact factor: 4.272

View more
  58 in total

1.  RNA editing and regulation of Drosophila 4f-rnp expression by sas-10 antisense readthrough mRNA transcripts.

Authors:  Nick T Peters; Justin A Rohrbach; Brian A Zalewski; Colleen M Byrkett; Jack C Vaughn
Journal:  RNA       Date:  2003-06       Impact factor: 4.942

2.  Widespread RNA editing of embedded alu elements in the human transcriptome.

Authors:  Dennis D Y Kim; Thomas T Y Kim; Thomas Walsh; Yoshifumi Kobayashi; Tara C Matise; Steven Buyske; Abram Gabriel
Journal:  Genome Res       Date:  2004-09       Impact factor: 9.043

Review 3.  Substitutional A-to-I RNA editing.

Authors:  Bjorn-Erik Wulff; Kazuko Nishikura
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Jul-Aug       Impact factor: 9.957

4.  ADAR1 RNA deaminase limits short interfering RNA efficacy in mammalian cells.

Authors:  Weidong Yang; Qingde Wang; Kelly L Howell; Joshua T Lee; Dan-Sung C Cho; John M Murray; Kazuko Nishikura
Journal:  J Biol Chem       Date:  2004-11-19       Impact factor: 5.157

Review 5.  Development of resistance to RNAi in mammalian cells.

Authors:  Zhi-Ming Zheng; Shuang Tang; Mingfang Tao
Journal:  Ann N Y Acad Sci       Date:  2005-11       Impact factor: 5.691

Review 6.  Structural and biochemical advances in mammalian RNAi.

Authors:  Robert E Collins; Xiaodong Cheng
Journal:  J Cell Biochem       Date:  2006-12-01       Impact factor: 4.429

Review 7.  How does RNA editing affect dsRNA-mediated gene silencing?

Authors:  B L Bass
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2006

Review 8.  Enhancement of replication of RNA viruses by ADAR1 via RNA editing and inhibition of RNA-activated protein kinase.

Authors:  Jean-François Gélinas; Guerline Clerzius; Eileen Shaw; Anne Gatignol
Journal:  J Virol       Date:  2011-04-13       Impact factor: 5.103

9.  Antagonistic and stimulative roles of ADAR1 in RNA silencing.

Authors:  Kazuko Nishikura; Masayuki Sakurai; Kantaro Ariyoshi; Hiromitsu Ota
Journal:  RNA Biol       Date:  2013-07-30       Impact factor: 4.652

10.  Modulation of microRNA processing and expression through RNA editing by ADAR deaminases.

Authors:  Weidong Yang; Thimmaiah P Chendrimada; Qingde Wang; Miyoko Higuchi; Peter H Seeburg; Ramin Shiekhattar; Kazuko Nishikura
Journal:  Nat Struct Mol Biol       Date:  2005-12-20       Impact factor: 15.369

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.