Literature DB >> 23930138

METABOLIC SPATIAL VARIABILITY IN ELECTRODE-RESPIRING GEOBACTER SULFURREDUCENS BIOFILMS.

Rs Renslow1, Jt Babauta, A Dohnalkova, Mi Boyanov, Km Kemner, Pd Majors, Jk Fredrickson, H Beyenal.   

Abstract

In this study, we quantified electron transfer rates, depth profiles of electron donor, and biofilm structure of Geobacter sulfurreducens biofilms using an electrochemical-nuclear magnetic resonance microimaging biofilm reactor. Our goal was to determine whether electron donor limitations existed in electron transfer processes of electrode-respiring G. sulfurreducens biofilms. Cells near the top of the biofilms consumed acetate and were metabolically active; however, acetate concentration decreased to below detection within the top 100 microns of the biofilms. Additionally, porosity in the biofilms fell below 10% near the electrode surface, exacerbating exclusion of acetate from the lower regions. The dense biofilm matrix in the acetate-depleted zone acted as an electrical conduit passing electrons generated at the top of the biofilm to the electrode. To verify the distribution of cell metabolic activity, we used uranium as a redox-active probe for localizing electron transfer activity and X-ray absorption spectroscopy to determine the uranium oxidation state. Cells near the top reduced UVI more actively than the cells near the base. High-resolution transmission electron microscopy images showed intact, healthy cells near the top and plasmolyzed cells near the base. Contrary to models proposed in the literature, which hypothesize that cells nearest the electrode surface are the most metabolically active because of a lower electron transfer resistance, our results suggest that electrical resistance through the biofilm does not restrict long-range electron transfer. Cells far from the electrode can respire across metabolically inactive cells, taking advantage of their extracellular infrastructure produced during the initial biofilm formation.

Entities:  

Keywords:  Geobacter; NMR; biofilm; electrochemically active; electron transfer; extracellular; magnetic resonance; uranium

Year:  2013        PMID: 23930138      PMCID: PMC3733395          DOI: 10.1039/C3EE40203G

Source DB:  PubMed          Journal:  Energy Environ Sci        ISSN: 1754-5692            Impact factor:   38.532


  32 in total

1.  Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells.

Authors:  Gemma Reguera; Kelly P Nevin; Julie S Nicoll; Sean F Covalla; Trevor L Woodard; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2006-08-25       Impact factor: 4.792

Review 2.  Electricity-producing bacterial communities in microbial fuel cells.

Authors:  Bruce E Logan; John M Regan
Journal:  Trends Microbiol       Date:  2006-10-16       Impact factor: 17.079

Review 3.  Exoelectrogenic bacteria that power microbial fuel cells.

Authors:  Bruce E Logan
Journal:  Nat Rev Microbiol       Date:  2009-03-30       Impact factor: 60.633

4.  Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells.

Authors:  K P Nevin; H Richter; S F Covalla; J P Johnson; T L Woodard; A L Orloff; H Jia; M Zhang; D R Lovley
Journal:  Environ Microbiol       Date:  2008-06-28       Impact factor: 5.491

5.  A serum bottle modification of the Hungate technique for cultivating obligate anaerobes.

Authors:  T L Miller; M J Wolin
Journal:  Appl Microbiol       Date:  1974-05

6.  DIFFUSION IN BIOFILMS RESPIRING ON ELECTRODES.

Authors:  Rs Renslow; Jt Babauta; Pd Majors; H Beyenal
Journal:  Energy Environ Sci       Date:  2012-11-15       Impact factor: 38.532

7.  Graphite electrodes as electron donors for anaerobic respiration.

Authors:  Kelvin B Gregory; Daniel R Bond; Derek R Lovley
Journal:  Environ Microbiol       Date:  2004-06       Impact factor: 5.491

8.  Biofilm shows spatially stratified metabolic responses to contaminant exposure.

Authors:  Bin Cao; Paul D Majors; Bulbul Ahmed; Ryan S Renslow; Crystal P Silvia; Liang Shi; Staffan Kjelleberg; Jim K Fredrickson; Haluk Beyenal
Journal:  Environ Microbiol       Date:  2012-08-23       Impact factor: 5.491

9.  Electricity generation by Geobacter sulfurreducens attached to gold electrodes.

Authors:  Hanno Richter; Kevin McCarthy; Kelly P Nevin; Jessica P Johnson; Vincent M Rotello; Derek R Lovley
Journal:  Langmuir       Date:  2008-02-28       Impact factor: 3.882

10.  Real-time spatial gene expression analysis within current-producing biofilms.

Authors:  Ashley E Franks; Richard H Glaven; Derek R Lovley
Journal:  ChemSusChem       Date:  2012-05-10       Impact factor: 8.928

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  15 in total

1.  Trade-offs between microbiome diversity and productivity in a stratified microbial mat.

Authors:  Hans C Bernstein; Colin Brislawn; Ryan S Renslow; Karl Dana; Beau Morton; Stephen R Lindemann; Hyun-Seob Song; Erhan Atci; Haluk Beyenal; James K Fredrickson; Janet K Jansson; James J Moran
Journal:  ISME J       Date:  2016-11-01       Impact factor: 10.302

2.  Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms.

Authors:  Dena L Cologgi; Allison M Speers; Blair A Bullard; Shelly D Kelly; Gemma Reguera
Journal:  Appl Environ Microbiol       Date:  2014-08-15       Impact factor: 4.792

3.  Modeling biofilms with dual extracellular electron transfer mechanisms.

Authors:  Ryan Renslow; Jerome Babauta; Andrew Kuprat; Jim Schenk; Cornelius Ivory; Jim Fredrickson; Haluk Beyenal
Journal:  Phys Chem Chem Phys       Date:  2013-11-28       Impact factor: 3.676

4.  Microbiosensor for the detection of acetate in electrode-respiring biofilms.

Authors:  Erhan Atci; Jerome T Babauta; Sujala T Sultana; Haluk Beyenal
Journal:  Biosens Bioelectron       Date:  2016-03-15       Impact factor: 10.618

5.  Excess surface area in bioelectrochemical systems causes ion transport limitations.

Authors:  Timothy D Harrington; Jerome T Babauta; Emily K Davenport; Ryan S Renslow; Haluk Beyenal
Journal:  Biotechnol Bioeng       Date:  2015-01-16       Impact factor: 4.530

6.  Colonization of epidermal tissue by Staphylococcus aureus produces localized hypoxia and stimulates secretion of antioxidant and caspase-14 proteins.

Authors:  Abdul G Lone; Erhan Atci; Ryan Renslow; Haluk Beyenal; Susan Noh; Boel Fransson; Nehal Abu-Lail; Jeong-Jin Park; David R Gang; Douglas R Call
Journal:  Infect Immun       Date:  2015-05-18       Impact factor: 3.441

Review 7.  Gradients and consequences of heterogeneity in biofilms.

Authors:  Jeanyoung Jo; Alexa Price-Whelan; Lars E P Dietrich
Journal:  Nat Rev Microbiol       Date:  2022-02-11       Impact factor: 78.297

8.  An inner membrane cytochrome required only for reduction of high redox potential extracellular electron acceptors.

Authors:  Caleb E Levar; Chi Ho Chan; Misha G Mehta-Kolte; Daniel R Bond
Journal:  mBio       Date:  2014-11-25       Impact factor: 7.867

9.  Localized electron transfer rates and microelectrode-based enrichment of microbial communities within a phototrophic microbial mat.

Authors:  Jerome T Babauta; Erhan Atci; Phuc T Ha; Stephen R Lindemann; Timothy Ewing; Douglas R Call; James K Fredrickson; Haluk Beyenal
Journal:  Front Microbiol       Date:  2014-01-27       Impact factor: 5.640

10.  A Generalized Spatial Measure for Resilience of Microbial Systems.

Authors:  Ryan S Renslow; Stephen R Lindemann; Hyun-Seob Song
Journal:  Front Microbiol       Date:  2016-04-07       Impact factor: 5.640

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