Literature DB >> 23927869

Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle.

James E Ferrell1.   

Abstract

The study of eukaryotic cell cycle regulation over the last several decades has led to a remarkably detailed understanding of the complex regulatory system that drives this fundamental process. This allows us to now look for recurring motifs in the regulatory system. Among these are negative feedback loops, which underpin checkpoints and generate cell cycle oscillations; positive feedback loops, which promote oscillations and make cell cycle transitions switch-like and unidirectional; and reciprocal regulation, which can increase the control a key regulator exerts. These simple motifs are found at multiple points in the cell cycle (e.g. S-phase and M-phase control) and are conserved in diverse organisms. These findings argue for an underlying unity in the principles of cell cycle control.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23927869      PMCID: PMC3836843          DOI: 10.1016/j.ceb.2013.07.007

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  107 in total

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Journal:  Cell       Date:  1983-06       Impact factor: 41.582

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Journal:  Mol Biol Cell       Date:  1999-04       Impact factor: 4.138

6.  The G(1) cyclin Cln3 promotes cell cycle entry via the transcription factor Swi6.

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Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

7.  The ubiquitin ligase APC(Cdh1) is required to maintain genome integrity in primary human cells.

Authors:  D Engelbert; D Schnerch; A Baumgarten; R Wäsch
Journal:  Oncogene       Date:  2007-08-13       Impact factor: 9.867

8.  Positive feedback of G1 cyclins ensures coherent cell cycle entry.

Authors:  Jan M Skotheim; Stefano Di Talia; Eric D Siggia; Frederick R Cross
Journal:  Nature       Date:  2008-07-17       Impact factor: 49.962

9.  Synergistic function of E2F7 and E2F8 is essential for cell survival and embryonic development.

Authors:  Jing Li; Cong Ran; Edward Li; Faye Gordon; Grant Comstock; Hasan Siddiqui; Whitney Cleghorn; Hui-Zi Chen; Karl Kornacker; Chang-Gong Liu; Shusil K Pandit; Mehrbod Khanizadeh; Michael Weinstein; Gustavo Leone; Alain de Bruin
Journal:  Dev Cell       Date:  2008-01       Impact factor: 12.270

10.  Functionally homologous cell cycle control genes in budding and fission yeast.

Authors:  D Beach; B Durkacz; P Nurse
Journal:  Nature       Date:  1982-12-23       Impact factor: 49.962

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  32 in total

Review 1.  Quantifying ubiquitin signaling.

Authors:  Alban Ordureau; Christian Münch; J Wade Harper
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

Review 2.  Organization of early frog embryos by chemical waves emanating from centrosomes.

Authors:  Keisuke Ishihara; Phuong A Nguyen; Martin Wühr; Aaron C Groen; Christine M Field; Timothy J Mitchison
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-09-05       Impact factor: 6.237

3.  Changes in PUB22 Ubiquitination Modes Triggered by MITOGEN-ACTIVATED PROTEIN KINASE3 Dampen the Immune Response.

Authors:  Giulia Furlan; Hirofumi Nakagami; Lennart Eschen-Lippold; Xiyuan Jiang; Petra Majovsky; Kathrin Kowarschik; Wolfgang Hoehenwarter; Justin Lee; Marco Trujillo
Journal:  Plant Cell       Date:  2017-03-09       Impact factor: 11.277

Review 4.  The Dark Side of Cell Signaling: Positive Roles for Negative Regulators.

Authors:  Mark A Lemmon; Daniel M Freed; Joseph Schlessinger; Anatoly Kiyatkin
Journal:  Cell       Date:  2016-03-10       Impact factor: 41.582

Review 5.  Ultrasensitivity part II: multisite phosphorylation, stoichiometric inhibitors, and positive feedback.

Authors:  James E Ferrell; Sang Hoon Ha
Journal:  Trends Biochem Sci       Date:  2014-10-23       Impact factor: 13.807

6.  Cell cycle gene expression networks discovered using systems biology: Significance in carcinogenesis.

Authors:  Robert E Scott; Prachi N Ghule; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2015-10       Impact factor: 6.384

7.  Human papillomavirus targets the YAP1-LATS2 feedback loop to drive cervical cancer development.

Authors:  Cong Huang; Xiangmin Lv; Peichao Chen; Jiyuan Liu; Chunbo He; Li Chen; Hongbo Wang; Madelyn L Moness; Jixin Dong; Bo R Rueda; John S Davis; Cheng Wang
Journal:  Oncogene       Date:  2022-06-27       Impact factor: 8.756

Review 8.  The dynamic control of signal transduction networks in cancer cells.

Authors:  Walter Kolch; Melinda Halasz; Marina Granovskaya; Boris N Kholodenko
Journal:  Nat Rev Cancer       Date:  2015-08-20       Impact factor: 60.716

9.  The G2-to-M Transition Is Ensured by a Dual Mechanism that Protects Cyclin B from Degradation by Cdc20-Activated APC/C.

Authors:  Pablo Lara-Gonzalez; Mark W Moyle; Jacqueline Budrewicz; Jose Mendoza-Lopez; Karen Oegema; Arshad Desai
Journal:  Dev Cell       Date:  2019-10-03       Impact factor: 12.270

10.  Bistability of a coupled Aurora B kinase-phosphatase system in cell division.

Authors:  Anatoly V Zaytsev; Dario Segura-Peña; Maxim Godzi; Abram Calderon; Edward R Ballister; Rumen Stamatov; Alyssa M Mayo; Laura Peterson; Ben E Black; Fazly I Ataullakhanov; Michael A Lampson; Ekaterina L Grishchuk
Journal:  Elife       Date:  2016-01-14       Impact factor: 8.140

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