Literature DB >> 23916531

Preparation of uniformly isotope labeled KcsA for solid state NMR: expression, purification, reconstitution into liposomes and functional assay.

Manasi P Bhate1, Benjamin J Wylie, Ameer Thompson, Lin Tian, Crina Nimigean, Ann E McDermott.   

Abstract

We report the expression, purification, liposome reconstitution and functional validation of uniformly (13)C and (15)N isotope labeled KcsA, a bacterial potassium channel that has high homology with mammalian channels, for solid-state NMR studies. The expression and purification is optimized for an average yield of ∼35-40mg/L of M9 media in a time-efficient way. The protein purity is confirmed by gel electrophoresis and the protein concentration is quantified by UV-vis absorption spectroscopy. Protocols to efficiently reconstitute KcsA into liposomes are also presented. The presence of liposomes is confirmed by cryo-electron microscopy images and the effect of magic angle spinning on liposome packing is shown. High-resolution solid-state NMR spectra of uniformly isotope labeled KcsA in these liposomes reveal that our protocol yields to a very homogenous KcsA sample with high signal to noise and several well-resolved residues in NMR spectra. Electrophysiology of our samples before and after solid-state NMR show that channel function and selectivity remain intact after the solid-state NMR.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Isotopic labeling; Liposomes; Membrane proteins; Reconstitution; Solid-state NMR

Mesh:

Substances:

Year:  2013        PMID: 23916531      PMCID: PMC3805054          DOI: 10.1016/j.pep.2013.07.013

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  23 in total

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Journal:  J Gen Physiol       Date:  2001-09       Impact factor: 4.086

6.  Influence of lipids on membrane assembly and stability of the potassium channel KcsA.

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Authors:  Xiang Dong Tang; Lindsey Ciali Santarelli; Stefan H Heinemann; Toshinori Hoshi
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9.  Na+ block and permeation in a K+ channel of known structure.

Authors:  Crina M Nimigean; Christopher Miller
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10.  A prokaryotic potassium ion channel with two predicted transmembrane segments from Streptomyces lividans.

Authors:  H Schrempf; O Schmidt; R Kümmerlen; S Hinnah; D Müller; M Betzler; T Steinkamp; R Wagner
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  16 in total

1.  An improved method for the cost-effective expression and purification of large quantities of KcsA.

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Authors:  Benjamin J Wylie; Manasi P Bhate; Ann E McDermott
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Authors:  Yunyao Xu; Dongyu Zhang; Rivkah Rogawski; Crina M Nimigean; Ann E McDermott
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5.  Probing allosteric coupling in a constitutively open mutant of the ion channel KcsA using solid-state NMR.

Authors:  Zhiyu Sun; Yunyao Xu; Dongyu Zhang; Ann E McDermott
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6.  Transmembrane allosteric energetics characterization for strong coupling between proton and potassium ion binding in the KcsA channel.

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Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-02       Impact factor: 11.205

7.  An Inward-Rectifier Potassium Channel Coordinates the Properties of Biologically Derived Membranes.

Authors:  Collin G Borcik; Derek B Versteeg; Benjamin J Wylie
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Review 8.  Perturbations of Native Membrane Protein Structure in Alkyl Phosphocholine Detergents: A Critical Assessment of NMR and Biophysical Studies.

Authors:  Christophe Chipot; François Dehez; Jason R Schnell; Nicole Zitzmann; Eva Pebay-Peyroula; Laurent J Catoire; Bruno Miroux; Edmund R S Kunji; Gianluigi Veglia; Timothy A Cross; Paul Schanda
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9.  NMR studies of lipid regulation of the K+ channel KcsA.

Authors:  Dongyu Zhang; Gary S Howarth; Lia A Parkin; Ann E McDermott
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-10-13       Impact factor: 4.019

10.  Transmembrane Interactions of Full-length Mammalian Bitopic Cytochrome-P450-Cytochrome-b5 Complex in Lipid Bilayers Revealed by Sensitivity-Enhanced Dynamic Nuclear Polarization Solid-state NMR Spectroscopy.

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Journal:  Sci Rep       Date:  2017-06-23       Impact factor: 4.379

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