Literature DB >> 23906714

Mammalian transcription-coupled excision repair.

Wim Vermeulen1, Maria Fousteri.   

Abstract

Transcriptional arrest caused by DNA damage is detrimental for cells and organisms as it impinges on gene expression and thereby on cell growth and survival. To alleviate transcriptional arrest, cells trigger a transcription-dependent genome surveillance pathway, termed transcription-coupled nucleotide excision repair (TC-NER) that ensures rapid removal of such transcription-impeding DNA lesions and prevents persistent stalling of transcription. Defective TC-NER is causatively linked to Cockayne syndrome, a rare severe genetic disorder with multisystem abnormalities that results in patients' death in early adulthood. Here we review recent data on how damage-arrested transcription is actively coupled to TC-NER in mammals and discuss new emerging models concerning the role of TC-NER-specific factors in this process.

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Year:  2013        PMID: 23906714      PMCID: PMC3721277          DOI: 10.1101/cshperspect.a012625

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  114 in total

1.  Genetic complementation groups in cockayne syndrome.

Authors:  K Tanaka; K Kawai; Y Kumahara; M Ikenaga; Y Okada
Journal:  Somatic Cell Genet       Date:  1981-07

2.  ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription-coupling factor.

Authors:  E Citterio; V Van Den Boom; G Schnitzler; R Kanaar; E Bonte; R E Kingston; J H Hoeijmakers; W Vermeulen
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

3.  Human transcription-repair coupling factor CSB/ERCC6 is a DNA-stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II.

Authors:  C P Selby; A Sancar
Journal:  J Biol Chem       Date:  1997-01-17       Impact factor: 5.157

4.  UV-induced association of the CSB remodeling protein with chromatin requires ATP-dependent relief of N-terminal autorepression.

Authors:  Robert J Lake; Anastasia Geyko; Girish Hemashettar; Yu Zhao; Hua-Ying Fan
Journal:  Mol Cell       Date:  2010-01-29       Impact factor: 17.970

5.  Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1.

Authors:  Roy Anindya; Ozan Aygün; Jesper Q Svejstrup
Journal:  Mol Cell       Date:  2007-11-09       Impact factor: 17.970

6.  Molecular basis of transcriptional mutagenesis at 8-oxoguanine.

Authors:  Gerke E Damsma; Patrick Cramer
Journal:  J Biol Chem       Date:  2009-09-16       Impact factor: 5.157

7.  Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene.

Authors:  I Mellon; G Spivak; P C Hanawalt
Journal:  Cell       Date:  1987-10-23       Impact factor: 41.582

8.  Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair.

Authors:  Yuka Nakazawa; Kensaku Sasaki; Norisato Mitsutake; Michiko Matsuse; Mayuko Shimada; Tiziana Nardo; Yoshito Takahashi; Kaname Ohyama; Kosei Ito; Hiroyuki Mishima; Masayo Nomura; Akira Kinoshita; Shinji Ono; Katsuya Takenaka; Ritsuko Masuyama; Takashi Kudo; Hanoch Slor; Atsushi Utani; Satoshi Tateishi; Shunichi Yamashita; Miria Stefanini; Alan R Lehmann; Koh-ichiro Yoshiura; Tomoo Ogi
Journal:  Nat Genet       Date:  2012-05       Impact factor: 38.330

9.  Impaired genome maintenance suppresses the growth hormone--insulin-like growth factor 1 axis in mice with Cockayne syndrome.

Authors:  Ingrid van der Pluijm; George A Garinis; Renata M C Brandt; Theo G M F Gorgels; Susan W Wijnhoven; Karin E M Diderich; Jan de Wit; James R Mitchell; Conny van Oostrom; Rudolf Beems; Laura J Niedernhofer; Susana Velasco; Errol C Friedberg; Kiyoji Tanaka; Harry van Steeg; Jan H J Hoeijmakers; Gijsbertus T J van der Horst
Journal:  PLoS Biol       Date:  2007-01       Impact factor: 8.029

10.  Persistent transcription-blocking DNA lesions trigger somatic growth attenuation associated with longevity.

Authors:  George A Garinis; Lieneke M Uittenboogaard; Heike Stachelscheid; Maria Fousteri; Wilfred van Ijcken; Timo M Breit; Harry van Steeg; Leon H F Mullenders; Gijsbertus T J van der Horst; Jens C Brüning; Carien M Niessen; Jan H J Hoeijmakers; Björn Schumacher
Journal:  Nat Cell Biol       Date:  2009-04-12       Impact factor: 28.824

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  87 in total

Review 1.  Nucleotide excision repair in eukaryotes.

Authors:  Orlando D Schärer
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-10-01       Impact factor: 10.005

Review 2.  Orchestral maneuvers at the damaged sites in nucleotide excision repair.

Authors:  Sergey Alekseev; Frédéric Coin
Journal:  Cell Mol Life Sci       Date:  2015-02-15       Impact factor: 9.261

Review 3.  Mechanisms of DNA damage, repair, and mutagenesis.

Authors:  Nimrat Chatterjee; Graham C Walker
Journal:  Environ Mol Mutagen       Date:  2017-05-09       Impact factor: 3.216

Review 4.  From Mfd to TRCF and Back Again-A Perspective on Bacterial Transcription-coupled Nucleotide Excision Repair.

Authors:  Alexandra M Deaconescu; Margaret M Suhanovsky
Journal:  Photochem Photobiol       Date:  2016-12-27       Impact factor: 3.421

Review 5.  Photobiological Origins of the Field of Genomic Maintenance.

Authors:  Ann Ganesan; Philip Hanawalt
Journal:  Photochem Photobiol       Date:  2015-12-16       Impact factor: 3.421

6.  Analysis of DNA binding by human factor xeroderma pigmentosum complementation group A (XPA) provides insight into its interactions with nucleotide excision repair substrates.

Authors:  Norie Sugitani; Markus W Voehler; Michelle S Roh; Agnieszka M Topolska-Woś; Walter J Chazin
Journal:  J Biol Chem       Date:  2017-08-31       Impact factor: 5.157

Review 7.  Nucleotide excision repair in humans.

Authors:  Graciela Spivak
Journal:  DNA Repair (Amst)       Date:  2015-09-10

Review 8.  Nucleotide Excision Repair: Finely Tuned Molecular Orchestra of Early Pre-incision Events.

Authors:  Qianzheng Zhu; Altaf A Wani
Journal:  Photochem Photobiol       Date:  2016-11-17       Impact factor: 3.421

Review 9.  Regulation of active genome integrity and expression by Rad26p.

Authors:  Shivani Malik; Sukesh R Bhaumik
Journal:  Nucleus       Date:  2014-10-31       Impact factor: 4.197

10.  Ribonucleotides as nucleotide excision repair substrates.

Authors:  Yuqin Cai; Nicholas E Geacintov; Suse Broyde
Journal:  DNA Repair (Amst)       Date:  2013-11-26
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