Literature DB >> 23875582

Structural, spectroscopic, and computational characterization of the azide adduct of Fe(III)(2,6-diacetylpyridinebis(semioxamazide)), a functional analogue of iron superoxide dismutase.

Craig T Gutman1, Ilia A Guzei, Thomas C Brunold.   

Abstract

We have prepared and thoroughly characterized, using X-ray crystallographic, spectroscopic, and computational methods, the diazide adduct of [Fe(III)(dapsox)(H2O)2](+) [dapsox = 2,6-diacetylpyridinebis(semioxamazide)], (1), a low-molecular weight, functional analogue of iron superoxide dismutase (FeSOD). The X-ray crystal structure of the dimeric form of 1, (Na[Fe(III)(dapsox)(N3)2]·DMF)2 (2) shows two axially coordinated, symmetry inequivalent azides with differing Fe-N3 bond lengths and Fe-N-N2 bond angles. This inequivalence of the azide ligands likely reflects the presence of an interdimer hydrogen bonding interaction between a dapsox NH group and the coordinated nitrogen of one of the two azide ligands. Resonance Raman (rR) data obtained for frozen aqueous solution and solid-state samples of 2 indicate that the azides remain inequivalent in solution, suggesting that one of the azide ligands of 1 engages in an intermolecular hydrogen bonding interaction with a water molecule. Density functional theory (DFT) and time-dependent DFT calculations have been used to study two different computational models of 1, one using coordinates taken from the X-ray crystal structure of 2, and the other generated via DFT geometry optimization. An evaluation of these models on the basis of electronic absorption, magnetic circular dichroism, and rR data indicates that the crystal structure based model yields a more accurate electronic structure description of 1, providing further support for the proposed intermolecular hydrogen bonding of 1 in the solid state and in solution. An analysis of the experimentally validated DFT results for this model reveals that the azides have both σ- and π-bonding interactions with the Fe(III) center and that more negative charge is located on the Fe-bound, rather than on the terminal, nitrogen atom of each azide. These observations are reminiscent of the results previously reported for the azide adduct of FeSOD and provide clues regarding the origin of the high catalytic activity of Fe-dapsox for superoxide disproportionation.

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Year:  2013        PMID: 23875582      PMCID: PMC3974274          DOI: 10.1021/ic401098x

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  26 in total

1.  Structure-function relationships in iron and manganese superoxide dismutases.

Authors:  W C Stallings; A L Metzger; K A Pattridge; J A Fee; M L Ludwig
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2.  Seven-coordinate iron and manganese complexes with acyclic and rigid pentadentate chelates and their superoxide dismutase activity.

Authors:  Gao-Feng Liu; Milos Filipović; Frank W Heinemann; Ivana Ivanović-Burmazović
Journal:  Inorg Chem       Date:  2007-09-20       Impact factor: 5.165

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Journal:  J Biol Chem       Date:  1976-09-25       Impact factor: 5.157

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Journal:  Biochemistry       Date:  1999-03-23       Impact factor: 3.162

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Authors:  Valeria Cizewski Culotta; Mei Yang; Thomas V O'Halloran
Journal:  Biochim Biophys Acta       Date:  2006-05-17

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Authors:  W C Stallings; K A Pattridge; R K Strong; M L Ludwig
Journal:  J Biol Chem       Date:  1984-09-10       Impact factor: 5.157

Review 7.  Mitochondria, oxygen free radicals, disease and ageing.

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Journal:  Trends Biochem Sci       Date:  2000-10       Impact factor: 13.807

8.  Effect of pressure on proton-coupled electron transfer reactions of seven-coordinate iron complexes in aqueous solutions.

Authors:  David Sarauli; Roland Meier; Gao-Feng Liu; Ivana Ivanović-Burmazović; Rudi van Eldik
Journal:  Inorg Chem       Date:  2005-10-17       Impact factor: 5.165

9.  Second-sphere contributions to substrate-analogue binding in iron(III) superoxide dismutase.

Authors:  Juan Xie; Emine Yikilmaz; Anne-Frances Miller; Thomas C Brunold
Journal:  J Am Chem Soc       Date:  2002-04-10       Impact factor: 15.419

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Journal:  FEBS Lett       Date:  1987-08-31       Impact factor: 4.124

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  2 in total

Review 1.  Mono- and binuclear non-heme iron chemistry from a theoretical perspective.

Authors:  Tibor András Rokob; Jakub Chalupský; Daniel Bím; Prokopis C Andrikopoulos; Martin Srnec; Lubomír Rulíšek
Journal:  J Biol Inorg Chem       Date:  2016-05-26       Impact factor: 3.358

2.  Spectroscopic and Computational Comparisons of Thiolate-Ligated Ferric Nonheme Complexes to Cysteine Dioxygenase: Second-Sphere Effects on Substrate (Analogue) Positioning.

Authors:  Anne A Fischer; Joshua R Miller; Richard J Jodts; Danushka M Ekanayake; Sergey V Lindeman; Thomas C Brunold; Adam T Fiedler
Journal:  Inorg Chem       Date:  2019-12-02       Impact factor: 5.165

  2 in total

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