Literature DB >> 23873084

Overexpression of microRNA OsmiR397 improves rice yield by increasing grain size and promoting panicle branching.

Yu-Chan Zhang1, Yang Yu, Cong-Ying Wang, Ze-Yuan Li, Qing Liu, Jie Xu, Jian-You Liao, Xiao-Jing Wang, Liang-Hu Qu, Fan Chen, Peiyong Xin, Cunyu Yan, Jinfang Chu, Hong-Qing Li, Yue-Qin Chen.   

Abstract

Increasing grain yields is a major focus of crop breeders around the world. Here we report that overexpression of the rice microRNA (miRNA) OsmiR397, which is naturally highly expressed in young panicles and grains, enlarges grain size and promotes panicle branching, leading to an increase in overall grain yield of up to 25% in a field trial. To our knowledge, no previous report has shown a positive regulatory role of miRNA in the control of plant seed size and grain yield. We determined that OsmiR397 increases grain yield by downregulating its target, OsLAC, whose product is a laccase-like protein that we found to be involved in the sensitivity of plants to brassinosteroids. As miR397 is highly conserved across different species, our results suggest that manipulating miR397 may be useful for increasing grain yield not only in rice but also in other cereal crops.

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Year:  2013        PMID: 23873084     DOI: 10.1038/nbt.2646

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  31 in total

1.  Early infection of scutellum tissue with Agrobacterium allows high-speed transformation of rice.

Authors:  Seiichi Toki; Naho Hara; Kazuko Ono; Haruko Onodera; Akemi Tagiri; Seibi Oka; Hiroshi Tanaka
Journal:  Plant J       Date:  2006-09       Impact factor: 6.417

2.  A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase.

Authors:  Xian-Jun Song; Wei Huang; Min Shi; Mei-Zhen Zhu; Hong-Xuan Lin
Journal:  Nat Genet       Date:  2007-04-08       Impact factor: 38.330

3.  SOAP2: an improved ultrafast tool for short read alignment.

Authors:  Ruiqiang Li; Chang Yu; Yingrui Li; Tak-Wah Lam; Siu-Ming Yiu; Karsten Kristiansen; Jun Wang
Journal:  Bioinformatics       Date:  2009-06-03       Impact factor: 6.937

4.  A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains.

Authors:  Qian-Hao Zhu; Andrew Spriggs; Louisa Matthew; Longjiang Fan; Gavin Kennedy; Frank Gubler; Chris Helliwell
Journal:  Genome Res       Date:  2008-08-07       Impact factor: 9.043

5.  Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice.

Authors:  Weiya Xue; Yongzhong Xing; Xiaoyu Weng; Yu Zhao; Weijiang Tang; Lei Wang; Hongju Zhou; Sibin Yu; Caiguo Xu; Xianghua Li; Qifa Zhang
Journal:  Nat Genet       Date:  2008-05-04       Impact factor: 38.330

6.  Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus.

Authors:  Chong-Jian Chen; Qing liu; Yu-Chan Zhang; Liang-Hu Qu; Yue-Qin Chen; Daniel Gautheret
Journal:  RNA Biol       Date:  2011-05-01       Impact factor: 4.652

7.  A gene controlling the number of primary rachis branches also controls the vascular bundle formation and hence is responsible to increase the harvest index and grain yield in rice.

Authors:  Tomio Terao; Kenji Nagata; Kazuko Morino; Tatsuro Hirose
Journal:  Theor Appl Genet       Date:  2009-11-22       Impact factor: 5.699

8.  An improved simplified high-sensitivity quantification method for determining brassinosteroids in different tissues of rice and Arabidopsis.

Authors:  Peiyong Xin; Jijun Yan; Jinshi Fan; Jinfang Chu; Cunyu Yan
Journal:  Plant Physiol       Date:  2013-06-25       Impact factor: 8.340

9.  Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.

Authors:  Dong-Hoon Jeong; Sunhee Park; Jixian Zhai; Sai Guna Ranjan Gurazada; Emanuele De Paoli; Blake C Meyers; Pamela J Green
Journal:  Plant Cell       Date:  2011-12-09       Impact factor: 11.277

10.  A rice brassinosteroid-deficient mutant, ebisu dwarf (d2), is caused by a loss of function of a new member of cytochrome P450.

Authors:  Zhi Hong; Miyako Ueguchi-Tanaka; Kazuto Umemura; Sakurako Uozu; Shozo Fujioka; Suguru Takatsuto; Shigeo Yoshida; Motoyuki Ashikari; Hidemi Kitano; Makoto Matsuoka
Journal:  Plant Cell       Date:  2003-11-13       Impact factor: 11.277

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  138 in total

1.  MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors.

Authors:  Patricia Baldrich; Sonia Campo; Ming-Tsung Wu; Tze-Tze Liu; Yue-Ie Caroline Hsing; Blanca San Segundo
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

2.  Genome-wide identification and evolutionary analysis of positively selected miRNA genes in domesticated rice.

Authors:  Qingpo Liu; Hong Wang; Haichao Hu; Hengmu Zhang
Journal:  Mol Genet Genomics       Date:  2014-11-02       Impact factor: 3.291

3.  Short tandem target mimic rice lines uncover functions of miRNAs in regulating important agronomic traits.

Authors:  Hui Zhang; Jinshan Zhang; Jun Yan; Feng Gou; Yanfei Mao; Guiliang Tang; José Ramón Botella; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

Review 4.  The pivotal role of small non-coding RNAs in the regulation of seed development.

Authors:  Andreia S Rodrigues; Célia M Miguel
Journal:  Plant Cell Rep       Date:  2017-03-13       Impact factor: 4.570

Review 5.  Systems biology of seeds: decoding the secret of biochemical seed factories for nutritional security.

Authors:  Anil Kumar; Rajesh Kumar Pathak; Aranyadip Gayen; Supriya Gupta; Manoj Singh; Charu Lata; Himanshu Sharma; Joy Kumar Roy; Sanjay Mohan Gupta
Journal:  3 Biotech       Date:  2018-10-24       Impact factor: 2.406

6.  The miR164-dependent regulatory pathway in developing maize seed.

Authors:  Lanjie Zheng; Xiangge Zhang; Haojun Zhang; Yong Gu; Xinrong Huang; Huanhuan Huang; Hanmei Liu; Junjie Zhang; Yufeng Hu; Yangping Li; Guowu Yu; Yinghong Liu; Shaneka S Lawson; Yubi Huang
Journal:  Mol Genet Genomics       Date:  2019-01-03       Impact factor: 3.291

Review 7.  The gymnastics of epigenomics in rice.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  Plant Cell Rep       Date:  2017-09-02       Impact factor: 4.570

Review 8.  New breeding technique "genome editing" for crop improvement: applications, potentials and challenges.

Authors:  Supriya B Aglawe; Kalyani M Barbadikar; Satendra K Mangrauthia; M Sheshu Madhav
Journal:  3 Biotech       Date:  2018-07-23       Impact factor: 2.406

9.  Water-deficit stress-responsive microRNAs and their targets in four durum wheat genotypes.

Authors:  Haipei Liu; Amanda J Able; Jason A Able
Journal:  Funct Integr Genomics       Date:  2016-08-25       Impact factor: 3.410

10.  MiR408 Regulates Grain Yield and Photosynthesis via a Phytocyanin Protein.

Authors:  Jin-Ping Zhang; Yang Yu; Yan-Zhao Feng; Yan-Fei Zhou; Fan Zhang; Yu-Wei Yang; Meng-Qi Lei; Yu-Chan Zhang; Yue-Qin Chen
Journal:  Plant Physiol       Date:  2017-09-13       Impact factor: 8.340

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