Literature DB >> 23869666

TIME FOR COFFEE is an essential component in the maintenance of metabolic homeostasis in Arabidopsis thaliana.

Alfredo Sanchez-Villarreal1, Jieun Shin, Nora Bujdoso, Toshihiro Obata, Ulla Neumann, Shen-Xiu Du, Zhaojun Ding, Amanda M Davis, Takayuki Shindo, Elmon Schmelzer, Ronan Sulpice, Adriano Nunes-Nesi, Mark Stitt, Alisdair R Fernie, Seth J Davis.   

Abstract

Plants often respond to environmental changes by reprogramming metabolic and stress-associated pathways. Homeostatic integration of signaling is a central requirement for ensuring metabolic stability in living organisms. Under diurnal conditions, properly timed rhythmic metabolism provides fitness benefits to plants. TIME FOR COFFEE (TIC) is a circadian regulator known to be involved in clock resetting at dawn. Here we explored the mechanism of influence of TIC in plant growth and development, as initiated by a microarray analysis. This global profiling showed that a loss of TIC function causes a major reprogramming of gene expression that predicts numerous developmental, metabolic, and stress-related phenotypes. This led us to demonstrate that this mutant exhibits late flowering, a plastochron defect, and diverse anatomical phenotypes. We further observed a starch-excess phenotype and altered soluble carbohydrate levels. tic exhibited hypersensitivity to oxidative stress and abscisic acid, and this was associated with a striking resistance to drought. These phenotypes were connected to an increase in total glutathione levels that correlated with a readjustment of amino acids and polyamine pools. By comparatively analyzing our transcriptomic and metabolomic data, we concluded that TIC is a central element in plant homeostasis that integrates and coordinates developmental, metabolic, and environmental signals.
© 2013 The Authors The Plant Journal © 2013 John Wiley & Sons Ltd.

Entities:  

Keywords:  Arabidopsis thaliana; TIME FOR COFFEE; circadian clock; metabolism; stress

Mesh:

Substances:

Year:  2013        PMID: 23869666     DOI: 10.1111/tpj.12292

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  22 in total

1.  Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod.

Authors:  Laise Rosado-Souza; Sebastian Proost; Michael Moulin; Susan Bergmann; Samuel E Bocobza; Asaph Aharoni; Teresa B Fitzpatrick; Marek Mutwil; Alisdair R Fernie; Toshihiro Obata
Journal:  Plant Physiol       Date:  2019-03-05       Impact factor: 8.340

Review 2.  The Plant Circadian Clock: From a Simple Timekeeper to a Complex Developmental Manager.

Authors:  Sabrina E Sanchez; Steve A Kay
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-12-01       Impact factor: 10.005

3.  Natural variation reveals that intracellular distribution of ELF3 protein is associated with function in the circadian clock.

Authors:  Muhammad Usman Anwer; Eleni Boikoglou; Eva Herrero; Marc Hallstein; Amanda Melaragno Davis; Geo Velikkakam James; Ferenc Nagy; Seth Jon Davis
Journal:  Elife       Date:  2014-05-27       Impact factor: 8.140

4.  AKIN10 activity as a cellular link between metabolism and circadian-clock entrainment in Arabidopsis thaliana.

Authors:  Alfredo Sánchez-Villarreal; Amanda M Davis; Seth J Davis
Journal:  Plant Signal Behav       Date:  2018-04-03

5.  TIME FOR COFFEE regulates phytochrome A-mediated hypocotyl growth through dawn-phased signaling.

Authors:  Yan Wang; Chen Su; Yingjun Yu; Yuqing He; Hua Wei; Na Li; Hong Li; Jie Duan; Bin Li; Jigang Li; Seth J Davis; Lei Wang
Journal:  Plant Cell       Date:  2022-07-30       Impact factor: 12.085

Review 6.  Variations in Circadian Clock Organization & Function: A Journey from Ancient to Recent.

Authors:  Alena Patnaik; Hemasundar Alavilli; Jnanendra Rath; Kishore C S Panigrahi; Madhusmita Panigrahy
Journal:  Planta       Date:  2022-09-29       Impact factor: 4.540

7.  The Role of Abscisic Acid Signaling in Maintaining the Metabolic Balance Required for Arabidopsis Growth under Nonstress Conditions.

Authors:  Takuya Yoshida; Toshihiro Obata; Regina Feil; John E Lunn; Yasunari Fujita; Kazuko Yamaguchi-Shinozaki; Alisdair R Fernie
Journal:  Plant Cell       Date:  2019-01-03       Impact factor: 11.277

Review 8.  Wheels within wheels: the plant circadian system.

Authors:  Polly Yingshan Hsu; Stacey L Harmer
Journal:  Trends Plant Sci       Date:  2013-12-24       Impact factor: 18.313

9.  A Novel Signaling Pathway Required for Arabidopsis Endodermal Root Organization Shapes the Rhizosphere Microbiome.

Authors:  Julius Durr; Guilhem Reyt; Stijn Spaepen; Sally Hilton; Cathal Meehan; Wu Qi; Takehiro Kamiya; Paulina Flis; Hugh G Dickinson; Attila Feher; Umashankar Shivshankar; Shruti Pavagadhi; Sanjay Swarup; David Salt; Gary D Bending; Jose Gutierrez-Marcos
Journal:  Plant Cell Physiol       Date:  2021-05-11       Impact factor: 4.927

10.  Sucrose and Ethylene Signaling Interact to Modulate the Circadian Clock.

Authors:  Michael J Haydon; Olga Mielczarek; Alexander Frank; Ángela Román; Alex A R Webb
Journal:  Plant Physiol       Date:  2017-08-04       Impact factor: 8.340

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