Literature DB >> 23868594

Measurement and analysis of in vitro actin polymerization.

Lynda K Doolittle1, Michael K Rosen, Shae B Padrick.   

Abstract

The polymerization of actin underlies force generation in numerous cellular processes. While actin polymerization can occur spontaneously, cells maintain control over this important process by preventing actin filament nucleation and then allowing stimulated polymerization and elongation by several regulated factors. Actin polymerization, regulated nucleation, and controlled elongation activities can be reconstituted in vitro, and used to probe the signaling cascades cells use to control when and where actin polymerization occurs. Introducing a pyrene fluorophore allows detection of filament formation by an increase in pyrene fluorescence. This method has been used for many years and continues to be broadly used, owing to its simplicity and flexibility. Here we describe how to perform and analyze these in vitro actin polymerization assays, with an emphasis on extracting useful descriptive parameters from kinetic data.

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Year:  2013        PMID: 23868594      PMCID: PMC3995334          DOI: 10.1007/978-1-62703-538-5_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  23 in total

1.  Different WASP family proteins stimulate different Arp2/3 complex-dependent actin-nucleating activities.

Authors:  J Zalevsky; L Lempert; H Kranitz; R D Mullins
Journal:  Curr Biol       Date:  2001-12-11       Impact factor: 10.834

2.  Polymerization kinetics of ADP- and ADP-Pi-actin determined by fluorescence microscopy.

Authors:  Ikuko Fujiwara; Dimitrios Vavylonis; Thomas D Pollard
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-15       Impact factor: 11.205

3.  Capping protein increases the rate of actin-based motility by promoting filament nucleation by the Arp2/3 complex.

Authors:  Orkun Akin; R Dyche Mullins
Journal:  Cell       Date:  2008-05-30       Impact factor: 41.582

4.  Arp2/3 complex is bound and activated by two WASP proteins.

Authors:  Shae B Padrick; Lynda K Doolittle; Chad A Brautigam; David S King; Michael K Rosen
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-15       Impact factor: 11.205

5.  Kinetic evidence for a monomer activation step in actin polymerization.

Authors:  J A Cooper; E L Buhle; S B Walker; T Y Tsong; T D Pollard
Journal:  Biochemistry       Date:  1983-04-26       Impact factor: 3.162

6.  Fluorimetry study of N-(1-pyrenyl)iodoacetamide-labelled F-actin. Local structural change of actin protomer both on polymerization and on binding of heavy meromyosin.

Authors:  T Kouyama; K Mihashi
Journal:  Eur J Biochem       Date:  1981

7.  Actin network architecture can determine myosin motor activity.

Authors:  Anne-Cécile Reymann; Rajaa Boujemaa-Paterski; Jean-Louis Martiel; Christophe Guérin; Wenxiang Cao; Harvey F Chin; Enrique M De La Cruz; Manuel Théry; Laurent Blanchoin
Journal:  Science       Date:  2012-06-08       Impact factor: 47.728

Review 8.  Mechanics of cytokinesis in eukaryotes.

Authors:  Thomas D Pollard
Journal:  Curr Opin Cell Biol       Date:  2009-12-22       Impact factor: 8.382

Review 9.  Clathrin-mediated endocytosis in budding yeast.

Authors:  Jasper Weinberg; David G Drubin
Journal:  Trends Cell Biol       Date:  2011-10-20       Impact factor: 20.808

10.  Mechanism of actin filament nucleation by the bacterial effector VopL.

Authors:  Bingke Yu; Hui-Chun Cheng; Chad A Brautigam; Diana R Tomchick; Michael K Rosen
Journal:  Nat Struct Mol Biol       Date:  2011-08-28       Impact factor: 15.369

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  32 in total

1.  Optogenetic engineering: light-directed cell motility.

Authors:  Robert M Hughes; David S Lawrence
Journal:  Angew Chem Int Ed Engl       Date:  2014-08-25       Impact factor: 15.336

2.  Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation.

Authors:  Benjamin A Smith; Shae B Padrick; Lynda K Doolittle; Karen Daugherty-Clarke; Ivan R Corrêa; Ming-Qun Xu; Bruce L Goode; Michael K Rosen; Jeff Gelles
Journal:  Elife       Date:  2013-09-03       Impact factor: 8.140

3.  The scaffold-protein IQGAP1 enhances and spatially restricts the actin-nucleating activity of Diaphanous-related formin 1 (DIAPH1).

Authors:  Anan Chen; Pam D Arora; Christine C Lai; John W Copeland; Trevor F Moraes; Christopher A McCulloch; Brigitte D Lavoie; Andrew Wilde
Journal:  J Biol Chem       Date:  2020-01-31       Impact factor: 5.157

4.  Integrin-bound talin head inhibits actin filament barbed-end elongation.

Authors:  Corina Ciobanasu; Hong Wang; Véronique Henriot; Cécile Mathieu; Annabelle Fente; Sandrine Csillag; Clémence Vigouroux; Bruno Faivre; Christophe Le Clainche
Journal:  J Biol Chem       Date:  2017-12-24       Impact factor: 5.157

5.  Optical Manipulation of F-Actin with Photoswitchable Small Molecules.

Authors:  Malgorzata Borowiak; Florian Küllmer; Florian Gegenfurtner; Sebastian Peil; Veselin Nasufovic; Stefan Zahler; Oliver Thorn-Seshold; Dirk Trauner; Hans-Dieter Arndt
Journal:  J Am Chem Soc       Date:  2020-05-11       Impact factor: 15.419

6.  The molecular basis of leukocyte adhesion involving phosphatidic acid and phospholipase D.

Authors:  Francis Speranza; Madhu Mahankali; Karen M Henkels; Julian Gomez-Cambronero
Journal:  J Biol Chem       Date:  2014-09-02       Impact factor: 5.157

7.  Actin Cross-Linking Toxin Is a Universal Inhibitor of Tandem-Organized and Oligomeric G-Actin Binding Proteins.

Authors:  Elena Kudryashova; David B Heisler; Blake Williams; Alyssa J Harker; Kyle Shafer; Margot E Quinlan; David R Kovar; Dimitrios Vavylonis; Dmitri S Kudryashov
Journal:  Curr Biol       Date:  2018-05-03       Impact factor: 10.834

8.  S6K is a morphogenic protein with a mechanism involving Filamin-A phosphorylation and phosphatidic acid binding.

Authors:  Karen M Henkels; Elizabeth R Mallets; Patrick B Dennis; Julian Gomez-Cambronero
Journal:  FASEB J       Date:  2014-12-15       Impact factor: 5.191

9.  Synthesis and Biological Evaluation of Kibdelone C and Its Simplified Derivatives.

Authors:  Janjira Rujirawanich; Soyeon Kim; Ai-Jun Ma; John R Butler; Yizhong Wang; Chao Wang; Michael Rosen; Bruce Posner; Deepak Nijhawan; Joseph M Ready
Journal:  J Am Chem Soc       Date:  2016-08-09       Impact factor: 15.419

10.  A Legionella effector kinase is activated by host inositol hexakisphosphate.

Authors:  Anju Sreelatha; Christine Nolan; Brenden C Park; Krzysztof Pawłowski; Diana R Tomchick; Vincent S Tagliabracci
Journal:  J Biol Chem       Date:  2020-03-30       Impact factor: 5.157

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