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Literature DB >> 23863072

Whole-genome sequencing for rapid susceptibility testing of M. tuberculosis.

Claudio U Köser, Josephine M Bryant, Jennifer Becq, M Estée Török, Matthew J Ellington, Marc A Marti-Renom, Andrew J Carmichael, Julian Parkhill, Geoffrey P Smith, Sharon J Peacock.

Abstract

Entities: Chemical

Mesh：

Year: 2013 PMID： 23863072 PMCID： PMC3836233 DOI： 10.1056/NEJMc1215305

Source DB: PubMed Journal: N Engl J Med ISSN： 0028-4793 Impact factor: 91.245

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5 in total

Review 1. The future of molecular diagnostics for drug-resistant tuberculosis.

Authors: Scott K Heysell; Eric R Houpt
Journal: Expert Rev Mol Diagn Date: 2012-05 Impact factor: 5.225

2. Microevolution of extensively drug-resistant tuberculosis in Russia.

Authors: Nicola Casali; Vladyslav Nikolayevskyy; Yanina Balabanova; Olga Ignatyeva; Irina Kontsevaya; Simon R Harris; Stephen D Bentley; Julian Parkhill; Sergey Nejentsev; Sven E Hoffner; Rolf D Horstmann; Timothy Brown; Francis Drobniewski
Journal: Genome Res Date: 2012-01-31 Impact factor: 9.043

3. Importance of improved TB diagnostics in addressing the extensively drug-resistant TB crisis.

Authors: Nicole Parrish; Karen Carrol
Journal: Future Microbiol Date: 2008-08 Impact factor: 3.165

Review 4. Routine use of microbial whole genome sequencing in diagnostic and public health microbiology.

Authors: Claudio U Köser; Matthew J Ellington; Edward J P Cartwright; Stephen H Gillespie; Nicholas M Brown; Mark Farrington; Matthew T G Holden; Gordon Dougan; Stephen D Bentley; Julian Parkhill; Sharon J Peacock
Journal: PLoS Pathog Date: 2012-08-02 Impact factor: 6.823

5. Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study.

Authors: Timothy M Walker; Camilla L C Ip; Ruth H Harrell; Jason T Evans; Georgia Kapatai; Martin J Dedicoat; David W Eyre; Daniel J Wilson; Peter M Hawkey; Derrick W Crook; Julian Parkhill; David Harris; A Sarah Walker; Rory Bowden; Philip Monk; E Grace Smith; Tim E A Peto
Journal: Lancet Infect Dis Date: 2012-11-15 Impact factor: 25.071

5 in total

83 in total

Review 1. Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions.

Authors: W Florian Fricke; David A Rasko
Journal: Nat Rev Genet Date: 2013-11-26 Impact factor: 53.242

2. Genetic Determinants of Drug Resistance in Mycobacterium tuberculosis and Their Diagnostic Value.

Authors: Maha R Farhat; Razvan Sultana; Oleg Iartchouk; Sam Bozeman; James Galagan; Peter Sisk; Christian Stolte; Hanna Nebenzahl-Guimaraes; Karen Jacobson; Alexander Sloutsky; Devinder Kaur; James Posey; Barry N Kreiswirth; Natalia Kurepina; Leen Rigouts; Elizabeth M Streicher; Tommie C Victor; Robin M Warren; Dick van Soolingen; Megan Murray
Journal: Am J Respir Crit Care Med Date: 2016-09-01 Impact factor: 21.405

3. Long term effect of gut microbiota transfer on diabetes development.

Authors: Jian Peng; Sukanya Narasimhan; Julian R Marchesi; Andrew Benson; F Susan Wong; Li Wen
Journal: J Autoimmun Date: 2014-04-22 Impact factor: 7.094

4. Drug susceptibility testing and mortality in patients treated for tuberculosis in high-burden countries: a multicentre cohort study.

Authors: Kathrin Zürcher; Marie Ballif; Lukas Fenner; Sonia Borrell; Peter M Keller; Joachim Gnokoro; Olivier Marcy; Marcel Yotebieng; Lameck Diero; E Jane Carter; Neesha Rockwood; Robert J Wilkinson; Helen Cox; Nicholas Ezati; Alash'le G Abimiku; Jimena Collantes; Anchalee Avihingsanon; Kamon Kawkitinarong; Miriam Reinhard; Rico Hömke; Robin Huebner; Sebastien Gagneux; Erik C Böttger; Matthias Egger
Journal: Lancet Infect Dis Date: 2019-02-08 Impact factor: 25.071

5. Bacterial whole-genome sequencing revisited: portable, scalable, and standardized analysis for typing and detection of virulence and antibiotic resistance genes.

Authors: Shana R Leopold; Richard V Goering; Anika Witten; Dag Harmsen; Alexander Mellmann
Journal: J Clin Microbiol Date: 2014-04-23 Impact factor: 5.948

6. Transmitted Extended-Spectrum Extensively Drug-Resistant Tuberculosis in Beijing, China, with Discordant Whole-Genome Sequencing Analysis Results.

Authors: Hao Li; Masood ur Rehman Kayani; Yunting Gu; Xiaobo Wang; Ting Zhu; Hongfei Duan; Yifeng Ma; Hairong Huang; Babak Javid
Journal: J Clin Microbiol Date: 2015-06-10 Impact factor: 5.948

7. Integration of whole-genome sequencing into infection control practices: the potential and the hurdles.

Authors: Elizabeth Robilotti; Mini Kamboj
Journal: J Clin Microbiol Date: 2015-02-11 Impact factor: 5.948

Review 8. Antimicrobial Stewardship: How the Microbiology Laboratory Can Right the Ship.

Authors: Philippe Morency-Potvin; David N Schwartz; Robert A Weinstein
Journal: Clin Microbiol Rev Date: 2016-12-14 Impact factor: 26.132

9. High risk and rapid appearance of multidrug resistance during tuberculosis treatment in Moldova.

Authors: Helen E Jenkins; Valeriu Crudu; Viorel Soltan; Ana Ciobanu; Liliana Domente; Ted Cohen
Journal: Eur Respir J Date: 2014-02-20 Impact factor: 16.671

10. The essential mycobacterial amidotransferase GatCAB is a modulator of specific translational fidelity.

Authors: Hong-Wei Su; Jun-Hao Zhu; Hao Li; Rong-Jun Cai; Christopher Ealand; Xun Wang; Yu-Xiang Chen; Masood Ur Rehman Kayani; Ting F Zhu; Danesh Moradigaravand; Hairong Huang; Bavesh D Kana; Babak Javid
Journal: Nat Microbiol Date: 2016-08-26 Impact factor: 17.745